| Entry |
|
|---|
| Name |
(RefSeq) endoribonuclease Dcr-1 isoform X1
|
|---|
| KO |
| K11592 | endoribonuclease Dicer [EC:3.1.26.-] |
|
|---|
| Organism |
bror Bacillus rossius redtenbacheri
|
|---|
| Brite |
KEGG Orthology (KO) [BR:bror00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:bror03036]
134537411
Chromosome and associated proteins [BR:bror03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
134537411
microRNA pathway
RISC loading complex
134537411
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
12:complement(5561666..5605861)
|
|---|
| AA seq |
2119 aa
MRGVLCSSPGLISLMAYHFNDNVHTKSFTPREYQVELLDAAKERNIIICLGTGSSKIFIA
TKLIQELASTIRRRWHEGGKRTLFLADSAVMVSQHASYIRHLTDLVVSEHSALDEDGVFT
PAYWDSVLRKHQVLVMTSAVCLHVLSQRFLQLTDINLLILDDCHRALTDHPMRQIMREHV
APCKSRPRVLGLTAPLLSSSSDPGHLEGELCRLEAALHCRAETASDIVCVLRYCSRPRQL
VAQCAAHSPGELDRLLESVVRDARAFLVDHRYDPTEVYEDEFLEEIRATPDPKTDPLSVF
DDFLHILHTLGAWCADRAALALLVQLEKLKVKTPYERHFLLLCMVSSVMVKIRAICEDFF
QSVPEKERIHRFSSPKVRRLVEVLLQFKPDKPDPGESAADRTDCELEGEPADPSPRDGVG
REAACSVKTLEKYTRTDSAHRSNCSGEDEATGINNNREVVIYRMPAKGCKECVAANGFSK
WTCGMILQRYETSLSLRKHCRRELNGFARLLPYSNSRINGFLDSPIVSGSVFKVSVGNSN
GMRNGIVAVKGVPRSELTSGDGDDDDDDDDVNLIIRTVGSIRLSLSTAHNPVAPALAPGP
VCLGGKEVAGDGDQKTAGGSPSRRRNVRGARYARKGFAKDDGAHQSRPQRHPALDDPDAL
CSIVFVERGFTAKILYHMFVELRHSDRQLSFLSPQYTMEKTMDPVAEPREAEAEHRQQEE
VLKRFRMRECNLLIATSVLEEGIDIPKCNLVVRFDPPSCYRAYVQSKGRARAPGAHYALL
VEQPRSEQLVGQLAQYCEIERMLLRKCSNQEPPDEEEQEADLYTDSVEPYTPANSPTNAS
VNLATAIALVNRYCAKLPSDTFTRLTPLCAVKSMVVEGTPFYQCVLRLPINSPVKQEIVG
AAVPSRALARRLAALEACRVLHRAKELDDNLLPIGKESFRVQWEEECGMAPDEEDSAPRD
PLEPRPGTTKRRQYYNKRIATALTDCRPTPGRPSFLYHVGMVLTCPLPEEQNTRGRKIYP
PEDSPQGFGILTLKPIPKICPFPIFTRSGEVRVTLDLCDSAVVLCEEKLDKIIAFLNYTF
TGVLRLQKYLMLFDPQASENSYFIVPTVRKAKEERVEVDWQFLDRIYMNRDLKPQPVPEE
EREGFQFDANKYYDAVIMPWYRNQDQPQYFYVAEICTHLSPKSAFPGSEYKTFDEYYFKK
YGIHIQNSHQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEATKRAKRENLEQKQILVP
ELCTVHPFPASLWRKAVCLPCVLYRVNALLLADQVRCVVAADIGLGSLRLPPDFQWAPLD
FGWSLADVLRKSRESHKAAPVPLEDKPAADPEPAESEDADAKTEEREQRREGEEEDGEWM
EIGTWSNDMAASALGGELPPGTSASDHVRYASPTSWLAYDGDGYDSDDDSSYGVMLEYEH
SEASEVQGTSGIRIEFKGDVAEAVDDDAPRSASPASAADVPWDWDAGVIESEEVTAHYAS
RFQDAVAASRRHIEESGMVVRPDQPVIMARPSAKFSQKEPEERRAGSPPVLRTAEPPGDD
CELDSGVSEKAWPDHGSASSLSSLDDSCFALDDELLNGFSFDGQPELLGHPGPSPSIILQ
ALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDSIHEGKLSHLRSKQVSNLNLYRL
GRRKVFGESMIATKFEPHDNWLPPCYYVPRELEQALIEAGVPASHWNQADLPALRELSRE
EICRLVQQRSEALGPAGQPHSPCSLEALPCFIPYNLITQHSIPDKSVADCVEALIGAYLI
ACGPRGALLFMAWLGICVLPQEGSDGKVQYGTLSPPPSPLLRHVRNPEADLESLLDGYDV
FERRIGYMFRDRSYLLQALTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHS
PGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGLGEVVDRFVRIQEENGHTISEEYY
LIEEDECEEAEDVEVPKALGDVFESVAGAIFMDSGMSLDAVWRVYYFMMKTEIEQFSTNV
PKSPIRELLELEPETAKFGKPEKLADGRRVRVTVEVFGKGSFKGIGRNYRIAKCTAAKCA
LKQLKKKGLLSKKLSVIGR |
|---|
| NT seq |
6360 nt +upstreamnt +downstreamnt
atgcgaggggtcctgtgttcgagtcccggattgatctcactgatggcctaccacttcaat
gacaatgtccacacaaagtctttcaccccgcgggagtatcaggtggagctgttggatgct
gcgaaagaacggaacatcatcatttgcctgggcacgggctcgtcgaagatcttcatcgca
accaagttgatacaggagctggccagcacgattcgcaggaggtggcacgaaggaggcaag
aggacgctgttcctggcagactctgcagtcatggtgtcccagcacgcctcgtacatccgc
cacctcacggacctggtggtgtccgaacacagcgctctggatgaggacggtgtcttcact
cccgcctactgggactccgtgctgcgcaaacatcaggtcctggtgatgaccagcgcggtg
tgtctgcacgtgctgagtcagcgcttcctgcaactcaccgacatcaacctgctgattctg
gacgattgccaccgcgctctgaccgaccaccccatgaggcagataatgcgggagcacgtg
gcgccgtgcaagagccggccgcgcgtgctggggctcacggcgccgctcctcagcagcagc
agcgacccgggacacctggaaggggagctgtgccggctggaggccgccctgcactgccgc
gcggagacggccagcgacatagtgtgcgtgctgcgctactgcagccggccgcgccagctg
gtggcgcagtgcgccgcgcactcgcccggcgagctggaccgcctgctggagtccgtagtg
cgggacgcccgcgccttcctggtcgaccaccgctacgaccccaccgaggtgtacgaggac
gagttcctggaggagatccgagccaccccggaccccaagacggacccgctgtccgtcttt
gacgacttcctgcacatcctgcacacgctgggggcgtggtgcgcggaccgtgccgccctg
gcgctcctcgtgcagctggagaagctgaaggtgaagactccgtacgagaggcacttcctg
ctgctgtgcatggtgtcgtctgtcatggtgaagatcagggcgatctgcgaggatttcttc
cagagcgtgccggagaaggagcgcatacacaggttctcgtcgccgaaggtgcgacgcctc
gtggaggtgctcctgcagttcaagcccgacaagccggacccgggcgagagcgctgcggac
aggaccgactgcgagctcgagggcgaaccagcggacccgtctccgagagacggggtgggc
cgggaggctgcgtgctcggttaaaactttagaaaaatacactcgaacagacagtgcacac
aggagtaactgcagcggggaggacgaggcgacaggaatcaataataatcgggaagttgta
atctaccgaatgccagcgaagggttgtaaagaatgtgttgccgcgaacggtttctcgaaa
tggacgtgcggtatgattctgcaacgttacgaaacttctttgagtttaagaaaacattgt
agacgggagttgaatggttttgcgagactgttgccatattcgaattcacgtataaatggt
tttttagatagcccaattgtttccggttcagtgttcaaagtgtcggtcggcaattcgaac
ggcatgcgtaacggcatcgtggcggttaagggtgttcctcgctcggaactcaccagcgga
gatggtgacgatgatgacgacgacgacgacgtaaatctcataataagaaccgtgggcagc
atcagactcagtctgtccaccgcacacaacccggtcgcccccgcccttgcgcccggccca
gtctgtctcggcggcaaggaggttgccggcgacggggaccagaagactgcggggggctcc
ccgtcgagacggcgcaacgtgcggggcgcgaggtacgcccgcaagggcttcgcgaaggac
gacggggcccaccagagccggccccagcgacacccggccctcgacgacccggatgctctc
tgcagcatcgtgtttgtggaaaggggattcacggccaagattctgtaccacatgttcgtg
gaactacggcactcggaccggcagctgtccttcctctcgccgcagtacaccatggagaag
acgatggacccggtggctgagccccgggaggcggaggcggagcaccggcagcaggaagag
gttctcaagaggttccgtatgcgcgagtgcaacctgctgatcgccacgtccgtgctggag
gagggcatcgacatccccaagtgcaacctggtggtgcgcttcgacccgccgtcctgctac
cgcgcgtacgtgcagtccaagggacgggctcgcgcccccggggcgcactacgccctgctg
gtggagcagccccgctcggagcagctggtgggccagctggcgcagtactgcgagatagag
aggatgttgctgaggaagtgctccaatcaggaacccccggatgaagaggagcaggaagcc
gacctgtacaccgactcagtggagccgtacacacctgccaacagtcctaccaacgcctcc
gtcaacttggcgactgctatcgccctcgtgaacaggtactgtgcaaaactgcccagcgac
acgttcacgcgcctgactccgctgtgtgcagtcaagtcaatggtggtggagggcacgccc
ttctaccagtgtgttctgcgactgcccatcaactccccggtcaagcaggagattgtgggc
gcggcagtgccgagcagggcgctggcacggcggttggcagccctggaggcgtgccgcgtg
ctccaccgggccaaggagctggacgacaacctgctgcccatcggcaaggagagcttccgc
gtgcagtgggaggaggagtgcggcatggcccccgacgaggaggactccgcccccagggac
ccgctggagccccgccccggtaccaccaagcgtcgccagtactacaacaagcggatagcg
actgctctgaccgactgccggcccacgcccggacgcccctcgttcctgtaccacgtgggg
atggtgctgacctgccctctgccggaggagcagaacacccgcggcaggaagatataccct
ccggaggactccccccaagggttcgggatactcacgctgaaacccatacctaagatatgc
cctttcccaatcttcactcgctccggggaagtgcgcgtgacgctggatctgtgcgactcc
gcggtcgtgctgtgtgaggagaagctggacaagatcattgcgttcctgaactacacgttc
acgggcgtcctgagactgcagaagtacctcatgctgttcgacccccaggcctccgagaac
tcctacttcatcgtccctacagtcaggaaagccaaggaggagcgggtcgaagtcgactgg
cagtttctggatcgcatatacatgaaccgtgacttgaaaccccagccggtgcccgaggaa
gaacgcgagggtttccagttcgatgccaacaagtactacgacgctgtgataatgccttgg
taccgcaaccaagatcagccgcagtacttctacgtggcagaaatatgcacccatctgagc
cccaaatctgcatttcctggctcagaatacaagacgtttgatgagtattacttcaagaag
tacggcattcacattcaaaacagtcaccagccgttgttagatgtggaccacacttcagct
cgtctcaatttcctcacgcctcggtacgtgaacaggaagggcgtggcgctccccaccagc
agcgaggccaccaagcgcgccaagcgggagaacctggagcagaagcagatcctggtgccg
gagctgtgcaccgtgcacccgttccccgcgtcgctgtggcgcaaggccgtgtgcctgccg
tgcgtcctgtaccgcgtcaacgcgctgctgctggcggaccaggtgcgctgtgtcgtggcg
gcggacatcggcctgggctcgctgcgcctcccgcccgatttccagtgggcgccactggac
tttgggtggagcctggcggacgtgctgaggaagtctcgggagagtcacaaggcggccccc
gtcccgctggaggacaagcctgccgcggaccccgagcctgcggagagcgaggacgccgac
gctaaaactgaggagcgcgagcagcggcgagagggcgaggaggaggacggggagtggatg
gagatcgggacgtggtccaacgacatggcggcctccgcgctgggcggggagctgcccccc
gggacctccgcgtcggaccacgtgcgctacgcctcgcccacgtcgtggctggcgtacgac
ggcgacggctacgacagcgacgacgacagcagctacggcgtgatgctggagtacgagcac
tccgaggccagcgaggtgcagggcacgtccgggattcgcatcgagttcaagggcgacgtg
gcggaggcggtcgacgacgacgccccccggagcgccagccccgcgagtgccgcggacgtg
ccgtgggactgggacgccggcgtcatcgagagcgaggaggtgacggcgcactacgcgtcc
cgcttccaggacgcggtcgctgcgagccgccgccacatcgaggagtcgggcatggtggtg
cggcccgaccagccggtgatcatggcccggccgagcgccaagttctcgcagaaggagccc
gaggagcgacgggcgggctccccgccggtgctgcggacggcggagcctccgggcgacgac
tgcgagctggacagcggagtgtcggagaaggcctggccggaccacggctccgccagctct
ctgtccagcctggacgactcctgcttcgcgctggacgacgagctcctgaacgggttcagc
ttcgacggccagccggagctgctcggccacccaggccccagccccagcatcatcctgcag
gcgctcacaatgtctaacgccaatgatgggatcaacttggagcgtctggagactattggt
gactcgtttttgaagtatgccatcaccacgtacttgtactgcacttacgacagcattcac
gaaggcaagctgagtcacctgcggtccaagcaggtgagcaacctgaacctgtaccggctg
gggcgacggaaggtgtttggggagagcatgatagccaccaagttcgagccccacgacaac
tggctgccgccgtgctactacgtgccgcgcgagctggagcaggcgctcatcgaggcgggc
gtgccggccagccactggaaccaggcggatctgcccgcgctgcgcgagctgtcgcgggag
gagatctgccgcctggtgcagcagcgcagcgaggccctcggccccgccggccagccgcac
agcccctgcagcctggaggccctgccctgcttcatcccctacaacctcatcacgcagcac
agcatccccgacaagagcgtggccgactgcgtggaggcgctgatcggcgcgtacctgata
gcgtgcgggccgcgcggggcgctgctcttcatggcgtggctgggcatctgcgtgctgcct
caggagggcagcgacggcaaggtgcagtacgggaccctgagcccccctccgtcacccctg
ctgcgtcatgtccgcaaccccgaagcagacctcgagagcttgctcgacggttacgacgtg
ttcgagcgtcgcatcggctacatgttccgagaccgcagctacttgctgcaggctctgact
cacgcttcgtactctcccaacagactcaccgactgctaccagcgactagagtttctcggg
gatgctgttctggactacctcatcacgaggcacctatacgaagactctcgccagcactcg
ccgggggccctcacggacctgcgctctgccctcgtcaacaacaccatcttcgcgtcgctg
gccgtgcggcacggcttccacaagtacttccgccacctgtcgccgggcctgggcgaagtg
gtggaccgcttcgtgcgcatccaggaggagaacggccacaccatcagcgaggagtactac
ctgatagaagaggacgaatgcgaggaggcagaggacgtagaagtgcccaaagccctgggt
gatgtgtttgagtcggtggccggcgccatcttcatggacagcggcatgtcgctggatgct
gtgtggcgggtctactacttcatgatgaagacagagatagaacagtttagtaccaatgtc
cctaaatctccgatacgagaactacttgaattggagccagaaactgcaaagtttgggaag
ccagagaaacttgcagacggaaggcgggttcgagtgacggtggaagtgtttgggaaaggc
tcgttcaaaggtatcggccgcaactaccgcatcgccaagtgtactgcggccaagtgcgcg
ctcaagcagcttaagaagaaaggcttgctgtcgaagaagctctccgtgattggcagatag |
|---|
