KEGG   Bacillus rossius redtenbacheri: 134538212
Entry
134538212         CDS       T09888                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit 1 isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
bror  Bacillus rossius redtenbacheri
Pathway
bror03030  DNA replication
bror03410  Base excision repair
bror03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bror00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    134538212
   03410 Base excision repair
    134538212
   03420 Nucleotide excision repair
    134538212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bror03032]
    134538212
   03400 DNA repair and recombination proteins [BR:bror03400]
    134538212
Enzymes [BR:bror01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     134538212
DNA replication proteins [BR:bror03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    134538212
DNA repair and recombination proteins [BR:bror03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      134538212
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 Toxin_28
Other DBs
NCBI-GeneID: 134538212
NCBI-ProteinID: XP_063235382
LinkDB
Position
13:complement(9445689..9504080)
AA seq 2316 aa
MVLQNSGKYRPEKKENPKFKAGPREETSELRLRESLENDDIDAKYGFKRVSDFLERTGFL
INMHTTEILDEDKRLISAVDYYFIQEDDTRFKVSMPYKPYFYILVKKEYIQEVSAFLTKK
FGGTLHKVEPVTKEDLDLPNHLIGLKQTYLKLSFFTVTDLVKVRREIMSAVRKNREREKN
NTYYTEMLTTALVNTGDVSVTKKSTDHMENILDIREYDVPYHVRVSIDMKIFCGSWYSVR
CVAGYVPVVTKRCDLIERPDPIVLAFDIETTKLPLKFPDANTDQIMMISYMIDGQGYLIT
NREIISSDIEDFEYTPKPEFEGLFTVFNEPDEMSLLQKFFDHILDVKPHIFVTYNGDFFD
WPFVEARAAVHELDMKQETGFSRNRDGIYACRPAMHMDCLCWVKRDSYLPVGSQNLKAVA
KAKLRYDPVELDPEDMCRLASEQPQVLSNYSVSDAVATYYLYMKYVHPFIFALCTIIPME
PDEVLRKGSGTLCEALLMVEAYHARIVFPNKQETELNKMTADGHVLDQETYVGGHVEALE
SGVFRADLPCRFRLVPEVFDKLAEGVEEAMKHAIEVEENIPLETVTNFEEVVTDIRAKLS
ELRNNPQRNERPIIYHLDVGAMYPNIILTNRLQPSAMVDETVCAACDFNRPGAKCQRRMP
WMWRGEIMPASRNEFQRIQQQLEMEKFPPQFPGGPARAFHALSREDQAAYEKKRLSEYCR
KAYKKAHVTRTEERLTTICQKENSFYVDTVRAFRDRRYEYKGLSKTAKKQVADAVAKGDA
GEIKSAKNREVLYDSLQLAHKCILNSFYGYVMRRGARWHSMEMAGIVCYTGAHIITKARE
IIEQVGRPLELDTDGIWCILPESFPENYVVRSTHAGKPKVTISYTNAVLNKMVKDSFTNH
VYHELVDPETLSYTVRSENSIFFEVDGPYLAMVLPASKEEGKKLKKRYAVFNLDGSLAEL
KGFEVKRRGELQLVKIFQSSVFEAFLKGDTLEKCYESVAKVADYWLDVLYSRACNMPDSE
LFELISENRSMSRKLEDYGAQKSTSISTAKRLAEFLGDQMVKDAGLACRFIISRKPEGSP
VTERAIPLAIFQSEPSVKRHYLRKWLKDSSLDDVDIREVLDWDYYIERLGGTIQKIVTIP
AAMQGLPNPVPRVQHPDWLHKKMLEKTDTLKQKRINEMFVVKPKEAQVLRQESEDMFAPE
AEAERRAGDIEDCAGPAAATSGRPVVWRAKRNRAEVDGGTSQDASKSSSSLMTQSWREVL
GPPPPLGTTKEERLAWLGYQKKKWELQAQQRASRGGGGGLPAGKRTRGEGRGAPGRGVVR
NPTAGTLGGFLRRAQRTLLDTPWQIVQISETNQPGLFKLWAFVGQELHQIRLVVPRIFYV
NQRLPRDETEAGGALWKKCSRVLPRSRPVYNLYEYSVPEDLYRQHSQELMADLSMPDIEG
IYETQVSLEFRALVRLGCVCAVDRAEARRVSAAGSSGTDSFSLAQLQFRSLAHSPYLPRL
PGGGHGVKRVFLYHARAPAGPRAVFGLFLAPSRRAVVLVLDTVRTDQMPNMGALYSAERA
NKINRGKPEETLPPKDHEFEVRMVTEARQAYRLIQRALQDYKDEKKGPTLVAIQSPLDLQ
TLASQIPGMGEFPLVPLHGRQDADGTAWDLNWQRNCARAMVRRYLGSDAVLDLMVEQARY
FHVPLGNLPPDATLFAADLFYARHLARHNFLLWCSPTDRPDLGGREADDNRLLTEFEESA
SVVTNNEGCYSSVCVELDIDGLAVNTLLQSHHVNDIEGTSSSVAFDTIPQASLEDMVGGQ
STVLPTYDETALVSGAFKVLRSMVNAWLRDVMLYKNVFADFQIVHFYRWIRSPNALLYDP
ALRRTLHNLMKKLFIQLVAEFKRLGSVIVYANFNKIIICTKKKTIEDAIGYVEFVVQSIR
NKELFHSIEITYQQCWEYLVWLDPSNHAGVQGTLPKVIGDVSTKESNNPESEENGGNGDD
VREGEVEEVLNENDDDENDDDGPTVTMNWNLVEYLPDVGGCRDSFSAVVAGYVSAVYSHI
RESGVPATPVRSRRVSSQSQTQAQARHLGVGAHASAAEFARQLVTGEMAQRLYRITQTVQ
EKARKQAKYLTSDNSGAFPSFRSSDLDHQDAALEFVKAVCKVLSLDSGVREEVMHVRRNM
LRLIGVGEFSERAVWRDPCVSFVLPEVICRTCNHCRDVDLCKDAHRAEEDGSPVWRCPLC
DTSYDNAEIEHLLLDAVQRKAMAYTLQDLQCRKCLQIKMDNMSKHCSCAGEYQTLVSRED
IGLHLRTFQSIAQHFKMPLLLETVKWALSLSPSIAT
NT seq 6951 nt   +upstreamnt  +downstreamnt
atggttttacagaatagtggtaaataccgaccagagaaaaaggaaaatccaaaatttaag
gcagggccaagagaagaaacatcagagcttcgcctcagagaatccctcgagaatgatgac
attgatgccaaatatggattcaagagagtttctgacttcctggagcggacgggcttcctc
atcaacatgcatacaacggaaattctcgatgaagataaaagattgatcagtgctgtggat
tactatttcatacaagaagatgacacccgcttcaaagtgtccatgccttacaagccgtac
ttctacattctcgtgaagaaggagtacattcaggaggtgtccgccttcctgaccaagaag
ttcggggggaccctgcacaaggtcgaaccagtgaccaaagaagacttggacctgccgaac
cacctcatcggcctgaagcaaacgtaccttaaactgtcgttcttcaccgtgactgacttg
gtgaaagtgcgcagagaaatcatgtctgcggtgcgcaagaatcgcgaacgagagaagaac
aacacctactacacggaaatgctcaccactgcgctcgtgaataccggagacgtcagtgtt
acaaagaagtcgactgaccacatggaaaacatattggacatcagggaatacgatgtgccg
taccacgtgcgcgtgtcgatcgacatgaagatcttctgcggctcgtggtactcggtgagg
tgcgtcgcgggctacgtcccggtcgtcacgaagaggtgtgacctgatcgagcggccggac
cccatcgtgctggccttcgacatcgagacgaccaagctgccgctcaagttcccggacgcc
aacaccgaccagataatgatgatctcgtacatgatcgacgggcagggctacttgataacc
aaccgcgagatcatctcttccgacatagaagatttcgaatacacgcccaagcccgagttc
gaggggctcttcacggtgttcaacgagccggacgagatgagcttgctgcagaagttcttc
gaccacatcctggacgtgaagccgcacatcttcgtcacgtacaacggggacttcttcgac
tggccgttcgtggaggcccgcgccgcggtccacgagctcgacatgaagcaggagacgggg
ttctcccgcaacagggacggcatctacgcgtgcagaccggccatgcacatggattgtctt
tgctgggtgaagcgggactcgtacctgcccgtcggctcccagaacctgaaggcagtggcg
aaggccaagctgcgctatgaccccgtcgagctggacccggaggacatgtgccgcctggcg
tcggagcagccccaggtgctgtccaactactccgtgtccgacgccgtagccacgtactac
ctgtacatgaagtacgtgcacccgttcatctttgcgctgtgcaccatcatccccatggag
ccggacgaggtgctgaggaagggctccgggacgctgtgcgaggcgctgctcatggtggag
gcctaccacgcccggatcgtgttccccaacaagcaggagacggagctgaacaagatgacg
gcggacggccacgtgctggaccaggagacgtacgtgggcggccacgtggaggcgctcgag
tcgggcgtgttccgcgccgacctgccctgccgcttccgcctggtcccagaggtgttcgac
aagttggccgaaggagtggaagaggcgatgaagcatgctatagaggtggaggaaaacatc
cctctagaaactgtgacaaacttcgaagaagtagtaacggacataagagctaagctgtct
gaactgcgcaacaacccacagcgcaacgagaggcctatcatttaccatttggatgtggga
gccatgtaccccaacatcattttgacgaacagattgcagccttccgctatggttgacgaa
acggtgtgtgccgcttgcgatttcaacagaccgggagctaaatgtcagcgaaggatgccg
tggatgtggcgaggggagataatgccggcgagtcggaacgagttccagcggatccagcag
cagctggagatggagaagttccccccgcagttccccggcgggccggcccgagcgttccac
gcgctcagccgggaggaccaggccgcgtacgagaagaagcggctgtccgagtactgccgc
aaggcgtacaagaaggcgcacgtcacccgcacggaggagaggctcaccaccatctgccag
aaggagaacagcttctacgtggacaccgtgcgggccttcagggaccggcgctacgagtac
aagggactgtccaagactgccaagaaacaggttgcagacgccgtagcaaagggtgatgcc
ggcgaaataaaatctgctaagaatcgagaagttttatacgactctcttcagttagcacat
aagtgcattctgaattctttctatggttacgtaatgaggagaggggcgcggtggcacagc
atggagatggcgggcatcgtgtgctacacgggcgcccacatcatcaccaaggcgcgggag
atcatcgagcaggtcggccggccgctcgagctggacacggacggcatctggtgcatcctg
cccgagtccttccccgagaactacgtggtgaggagcacgcatgccgggaagcccaaggtc
accatctcctacaccaacgccgtcctcaacaagatggtcaaggatagtttcacgaatcac
gtgtaccacgaactggtggaccccgagacgctgtcgtacaccgtacgaagtgagaattcc
atatttttcgaagtggatgggccgtacctggcgatggtcctccctgcgtccaaggaggaa
gggaagaagttgaagaaacgttatgcggttttcaatctggacgggtccttggcggagttg
aaagggtttgaagtgaagaggagaggggagttgcagttggtgaaaatcttccagtcgtct
gttttcgaagcgtttttgaaaggcgacacgttagagaagtgttacgagtcagtcgccaaa
gtggccgactactggcttgacgttctttacagccgggcttgcaacatgccagactcggag
ctgttcgagctgatctcggagaaccgctccatgtcccggaagctggaggactacggggcc
cagaagtccacctccatctccaccgccaagcgcctggcggagttcctgggggaccagatg
gtgaaggacgctggcctggcctgtcgcttcatcatctccaggaaaccggaaggttccccc
gtcacagagagggcgatcccgctggccatcttccagtcggagcccagcgtgaagcggcac
tacctgcgcaagtggctgaaggactcgtcgctcgacgacgtggacatacgcgaggtgctc
gactgggactactacatcgagaggctgggcggcaccatccagaagatcgtcaccataccg
gccgccatgcaagggctgccgaatccagtgccccgagtgcagcaccctgattggctgcac
aagaagatgctggaaaagactgacactctgaagcagaagagaattaacgagatgtttgtg
gtgaagcctaaagaagcccaggtgctgcggcaagaatcggaggacatgtttgccccggag
gcggaggcagagcgccgggcgggcgacattgaagactgcgcggggccagcggccgctact
tctggcaggcccgtcgtgtggcgggccaagcggaaccgggcggaagtggacggcgggacc
tcccaggacgcctccaagtcttcgtcgtccctgatgacgcagagctggagggaggtcctc
ggcccgcctccccctctcggcaccaccaaggaggagcggctggcgtggctcgggtaccag
aagaagaagtgggagctgcaggcccagcagcgggccagtcgcggcgggggagggggcctc
cctgccgggaagaggacccgcggggaggggcggggggcccccgggcggggcgtggtgagg
aaccccacggccggcacgctcgggggcttcctgcgacgcgcccagcgcacgctgctcgac
accccgtggcagatcgtgcagatctcggaaaccaaccagccggggctgttcaagctgtgg
gccttcgtggggcaggagttgcaccagatcaggctggtcgtgccgcgcatattctacgtg
aaccagcggctgccccgcgacgagacggaggcggggggggccctgtggaagaagtgcagc
cgcgtgctgcctcgctcccggcccgtctacaacctgtacgagtacagcgtgccggaggat
ctgtacaggcagcacagccaggagctgatggcagacctgtccatgcccgacatcgagggc
atctacgagacgcaggtgtccctggagttcagggccctggtgcgcctgggctgcgtctgc
gccgtggaccgggctgaggcgcggcgcgtctcggcggccggcagcagcggcacggactcc
ttctccctggcgcagctccagttccgcagcctcgcgcactcgccctacctcccccggctg
ccgggcggcgggcacggcgtgaagcgagtgttcctgtaccacgcccgggcgccggccggc
ccccgcgccgtgttcggcctgttcctcgcccccagccgccgggccgtggtgctggtgctg
gacaccgtgcgcaccgaccagatgcccaacatgggtgctctgtacagcgctgagagagcc
aacaaaataaaccgtgggaagccggaggaaacgttgccgcccaaagaccacgagttcgag
gtgcgcatggtgacagaggcgcggcaggcgtaccgactgatacagagggcgctccaagac
tacaaggacgagaagaaaggtcccaccctggtggccattcagtctccgcttgatctccag
accctggcgtcccagatcccgggcatgggggagttcccgctggtgcccttgcacgggcgg
caggacgcggacgggactgcctgggacctgaactggcagcgcaactgcgcccgggccatg
gtccgccgctacctgggcagcgacgccgtgctggacctgatggtggagcaggcccgctac
ttccacgtgccgctcggcaacctgccccccgacgcgaccctgttcgccgccgacctgttc
tacgcccgccacctcgcccggcacaacttcctgctgtggtgctcgcccacggaccggccc
gacctcggcggcagggaggccgacgacaacaggctgctgacggagttcgaggagagcgcg
agcgtggtgacgaacaacgagggctgctactcctccgtctgcgtggagctagacattgac
gggctggcggtgaacaccctgctccagtcccaccacgtcaacgacattgaaggtacaagc
tccagtgtggccttcgacacgatacctcaggcgtccctggaagacatggtggggggtcag
agcacggtcttgccgacgtacgacgagaccgcgttggtcagcggagctttcaaagtgctg
cgctccatggtgaacgcgtggcttcgggacgtgatgctttacaagaacgtgttcgccgac
tttcagatcgtccatttctacaggtggataaggtccccaaatgcactgctgtatgatcct
gctcttagaagaactttgcataacttgatgaagaaactgtttattcagctggtcgcagag
ttcaagaggctggggtctgttatcgtgtacgctaatttcaacaagatcatcatctgcacc
aagaagaagaccattgaggatgctattggctacgtggagtttgtggtccagagcatacga
aacaaggagttgttccacagcattgaaataacgtaccagcagtgttgggagtacctcgtg
tggctggatccgtcgaaccatgccggcgttcaaggtacccttcccaaagttattggggat
gtcagtactaaagagagcaataacccagagagcgaagagaacggaggcaacggtgacgac
gtgagagaaggggaagtggaagaggtcctgaatgaaaatgacgacgatgaaaatgacgat
gatgggccgacggtgacgatgaactggaacctggtggagtacctgcctgacgtcgggggc
tgcagggacagcttcagcgcggtcgtcgccggctacgtcagcgccgtgtactcgcacatc
cgggagagcggggttccggcgactcccgtgcgctcgcgtcgcgtgagcagccagagccag
acacaggcccaggcgcggcacctgggcgtgggggcccacgcctcggccgcggagttcgcc
aggcagcttgtcacgggcgagatggcccagaggctgtaccgcattactcaaactgttcaa
gagaaggcgaggaagcaagcaaaatacttgacaagtgacaacagcggggcgttcccctcg
tttcggagttcagatctcgaccaccaagatgcagctcttgagtttgttaaagctgtctgc
aaggtgctgtcgctggactcgggcgtgcgggaggaggtgatgcacgtgagacgcaacatg
cttcgcctgatcggcgtgggggagttcagcgagcgtgccgtgtggcgggacccgtgcgtc
tccttcgtgctgccggaggtcatctgcaggacgtgcaaccactgccgcgacgtcgacctc
tgcaaggacgcccaccgcgccgaagaggacggcagcccggtgtggcggtgcccgctctgc
gacaccagctacgacaacgccgagatagagcacctcttgctggacgccgtccagcggaag
gcgatggcgtacactctgcaggacctgcagtgcaggaagtgcctgcagatcaagatggat
aacatgtccaagcactgcagctgtgcgggcgaataccagacgctggtgtccagggaggac
ataggcttgcacctgaggaccttccagagcatagcccagcacttcaagatgcctctgctg
ctggagacggtcaagtgggccctgagcctcagccccagcatagcgacgtga

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