Bacillus rossius redtenbacheri: 134538214
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Entry
134538214 CDS
T09888
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
bror
Bacillus rossius redtenbacheri
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bror03041
]
134538214
Spliceosome [BR:
bror03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134538214
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
ARM_TT21_5th
NRDE-2
UTP6_C
TPR_15
KH_11
Motif
Other DBs
NCBI-GeneID:
134538214
NCBI-ProteinID:
XP_063235386
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All DBs
Position
13:9504741..9543143
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AA seq
1259 aa
AA seq
DB search
MASVEDVDVNLQESAPVRRSKNVAKRGRSKKRGAATVSTRATRSKKVLSSSMDSEEEEEA
EETSQNDVEAQDDQEVGRDLDSSDESKNTVVENDVIKNGVEETASPEIKTKPKEIKSESG
LTEEDDAEVTTKSRGETGPEVDLANVESETKVKVEADKTISASNETECVKAESTVESEVP
KSDAKIASNDDEADEGVVVEKDKKAAEKTAEKSIVKEEKTAAVYVIPIEDDVAMIKEGVS
TSDENAASTKVTVTVKDESATVEDKPITVEDKSATVEDKPITVEDKSATVEDKPITVEDK
SVILEDEAVPGENKSADNKSVSAEDKTAITKAKNKSAAERKMTDADDTGDVTMIGKEKVS
PLVPSKKKQVSSEGGSSEKQNGAKPVDSSSAGSPMDVDGSQSAETPAGGRKEREQSPEAG
DMKNASMDDMTVIDEVDDEGDEKEEGGKAGDKTHTQLDDTEMVSEDELPTETAKEPETEA
VSDEELPEPAASGDLPETEEVSEDELPPEKTEKKKKDSKPAAPVEPDKASEQAKKKRKSR
FEAQKRKLAEGDTYDPSSPTSENSCDETPSAKRAALSSGSTDGKVKQSVKGRKTLPELEK
YWKAVKEDASDFTGWTYLLQYVDQENDIDAAREAYDAFLSHYPYCYGYWRKYADYEKRKG
NKEKCEEVFDRGLKAIPLSVDLWIHYLHYCKTAFADDEEFLRAQFERALTACGMEFRSDR
LWESYIKWETEGKRLQNVTAIYDRLLNMPTQGYTSHFENFQEHVSSNAPQKVLSVDEFLS
LRREVLQLLKQYDSPKAEEAAPGEEVEAPPGEEPEEMPSVSDEETTALRERIVSLRRKVH
KATVAAVADRWNFEEGIKRPYFHVKPLERCQLKNWKEYLDFEIEKGDKERIVILFERCLI
ACALYEEFWLKFVRYLENEKDEDMVDKIRDVYERACTIHHPKKPNLHLHWSVFEESHKNF
DKAAEILTNLEKAVPNLVQVSYRRINLERRRGNLDKVCSLYEHYINGSKNKVIANNMAIK
YARFCWKVKGDVERAISILNKALEKDKENPRLYLQLIDMGMQRSTLDEAEIISTIDLFLS
RDVDPEQKVLFAQRKVEFLEDFSSDIVSVQKSHDEFLRYCKQIKDRKKKSADEAKSSDSA
SKKAKPSGGSGGDASLHVSQSHAGAQSQAVQPAGGQSTAGQYAAQGYAQGGYSQAPPVQG
SYQGGQYAAGSQPGPYGQAAYGQQYGQSGDQNYANYQNWGYSQTGYGGYNQGWGNYNYY
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggttgaagatgttgatgtaaatttacaagagtcagcgcctgtgcgtcgatcg
aaaaatgtggcgaagcgtggtcgaagcaagaagaggggcgcagcgacagtgtccaccaga
gccactcggtccaagaaggtgttgtcgagctctatggactcggaggaggaagaggaggca
gaggaaacatctcaaaatgatgtagaggctcaagatgatcaggaagttggacgcgacctt
gattcgtctgatgagtccaagaacactgttgttgaaaacgatgtaataaaaaatggagtg
gaagaaactgcatctcctgaaattaagacaaaacctaaagaaataaaatcagaaagtggt
cttacggaagaagatgatgcagaggttacgaccaagtcgagaggcgagactggtcctgag
gtggatctcgctaatgtagaaagtgagacaaaggtgaaagttgaagcagacaagaccatt
agtgcaagtaatgaaactgaatgtgtcaaagcagaatcaactgtagaaagtgaagtcccc
aagtcagatgcaaagatagctagcaatgatgacgaagcagatgagggagtagttgtagaa
aaagataagaaggctgctgagaagacggcagaaaagtctattgtcaaagaagagaaaacc
gctgctgtatatgtaatccctatagaggatgatgtagctatgattaaagaaggtgtgtct
acatctgatgagaatgctgctagcaccaaagttactgtcactgtgaaagatgagtctgcc
actgtagaagataagcccatcactgtggaagataagtctgccactgtagaagataagccc
atcactgtggaagataagtctgccactgtagaagataagcccatcactgtggaagataag
tctgtcattttagaagatgaggctgtgcctggagaaaataagtctgctgacaacaagtct
gtcagtgcagaagataagactgccattactaaagccaaaaataagtctgctgctgagcgc
aagatgacagatgcagatgatactggagatgtgacgatgattggcaaggaaaaagtttca
cctctagtaccatcaaagaagaaacaagtctcgtctgaaggtggtagtagtgaaaaacaa
aatggggccaagcccgtcgactcgtcaagcgcggggagccccatggacgtggacgggagc
cagtccgcggagacgccggccggcggcaggaaggagcgcgagcagtcccccgaggcggga
gacatgaagaacgccagcatggacgacatgacggtgatcgacgaggtcgacgacgagggg
gacgagaaggaggagggcggcaaggcgggcgataaaactcacacgcagctggacgacacg
gagatggtgtcggaggacgaactgccgacggagaccgcgaaggagccggagacagaggcc
gtgtcggacgaggagctgccggagccggcggcgtcgggagacctgcccgagacggaggaa
gtgtccgaggacgagctcccgccggagaaaaccgagaagaagaagaaggattccaaaccg
gcggcaccagtcgagccagacaaagcatcagaacaagcaaagaagaaaaggaagagcaga
tttgaagctcagaagaggaagctagctgaaggggacacatatgatcccagctcaccaaca
tccgaaaatagctgtgacgagactccttcggccaagagagccgccttgtcatccggaagc
acggacggcaaagtgaaacaatctgttaaaggtcgtaaaactcttccagaactggagaaa
tattggaaagcggttaaggaagacgcatctgatttcacaggatggacatatcttcttcaa
tacgtggatcaggagaatgacattgatgctgctcgcgaggcatacgatgcatttctttcc
cactatccgtattgctatggatactggcgcaagtatgcggactacgagaagaggaaaggc
aacaaggagaaatgcgaggaggtgtttgatcgtggtttgaaagcaatcccgctcagcgtg
gatctgtggatccattacctgcactactgcaaaacagcatttgcagatgatgaggagttt
cttcgagcacagttcgaaagagctctcactgcatgtgggatggaattcagatccgacagg
ctctgggagagctacatcaagtgggagacggagggcaaacgactgcagaacgtcacagct
atttacgatcgtcttttaaacatgccaacccaaggttacacgtcacattttgagaacttc
caggagcacgtgagcagcaacgccccgcagaaggtgctgtcggtggacgagttcctgtcg
ctgcgccgcgaggtgctgcagctgctgaagcagtatgactcgcccaaggcggaggaggcg
gcccccggcgaggaggtggaggccccgcccggcgaggagcccgaggagatgccttccgtg
agcgatgaggagacaacagctctgagggaaagaattgtttcgttgcgacgaaaagttcac
aaggccaccgtcgctgctgtggctgaccgatggaatttcgaagaaggcatcaagcgaccc
tacttccacgtgaaaccactggagcgatgtcaactaaaaaactggaaggaatatcttgat
tttgaaatagagaaaggagataaagaacgtattgtcatattgtttgagagatgtctcatt
gcctgtgctctttatgaagagttttggcttaagtttgtgcgttatcttgaaaatgaaaaa
gacgaggacatggtcgacaaaataagagatgtatacgagcgtgcttgcacgatccatcat
ccaaaaaagccaaacctccacttacattggtccgtgtttgaagaaagccacaaaaatttt
gacaaagctgcggagatcctgactaacttggagaaggctgtgccgaacctggtccaggtg
tcataccgacgcatcaacctcgagaggcggcgtggaaatctagacaaagtgtgttccttg
tacgagcactacatcaacggctcgaagaacaaagtcatcgccaacaacatggcaatcaag
tacgccaggttctgctggaaagtgaagggcgacgttgagagagccatttccattttgaac
aaagcgctggagaaagacaaggagaatcctcgtttgtacttgcagttaatagacatgggc
atgcagaggtccacgttggatgaagcggagataatatccacaatagacttgttcctcagc
agggacgtggaccccgaacagaaggttttgtttgcccagaggaaagtcgagttcttggaa
gatttcagttcggatatcgtcagtgttcagaagagccatgatgaatttttacgttactgc
aaacaaataaaagatcggaagaagaagagtgctgatgaggcaaaaagcagcgacagcgcg
tcgaagaaggccaagccgagcggaggcagcggcggagacgcgtcgcttcacgtgtcacag
tcccacgcgggggcacagtcccaggccgtgcagccggccggcggccagagcacggccggc
cagtacgccgcgcagggctacgctcagggcggctactcccaggccccgcccgttcagggc
agctaccaggggggccagtacgccgctgggtcccagccggggccctacggccaggctgcc
tacggccagcagtacggccagtccggggaccagaactacgccaactaccagaactggggc
tactcgcagaccggctacggcggctacaaccagggctgggggaactacaactactactaa
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