Bacillus rossius redtenbacheri: 134538284
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Entry
134538284 CDS
T09888
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
bror
Bacillus rossius redtenbacheri
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134538284
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
134538284
3'-5' decay
Other 3'-5' decay factors
134538284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
ResIII
PAM2
UvrD-helicase
AAA_22
AAA_14
TPR_4
TPR_14
AAA_18
AAA_16
AAA_24
Motif
Other DBs
NCBI-GeneID:
134538284
NCBI-ProteinID:
XP_063235527
LinkDB
All DBs
Position
13:17350455..17403776
Genome browser
AA seq
1562 aa
AA seq
DB search
MSELEVQAYELLRRREWFRAAELFDQLLSPVFLKSVSAAKIVCFLLGRAECMHELGQHET
VVSDCRHVLKLLGEVHSIGNYGIIARRCLVHSLFALGRFTEAEAVAREWLTTGGGPSNQP
EALKMLERLRIVSQMSNPRRSCSEGDSMDNHVGVNSVEHWPEQLSKQRKHPVRLLNDFSE
KTSNDNLVQKNHQEVFHREEAMLTGSANYEFHADHAGPGRDANVCSYCCLAFASRADLQA
HCQSDGHQTVVMSDEGRDWEWRPPPRGLTADAYTLCEGAPCRYGALCVEAHGPEELAEWR
ERFRYRSMKVQRAYEKELFGKSYTEQLLERWVQAASPEKIMRESVSGVEETCSDELVTTV
ASKTSHKQWLFVLKTNKLLRIVALLQDAHRNHFAIKYVSTRDLFRNVLSEWSPSNDQEWS
VPAIPGIEQGEEQPAPPYLHHHVKIEFATDIYGTFRQSVVFDFGEEPVLVRHLCVDVVPV
TDVDRLKEICKELVISTSERWDAANSDVVPFSSSVTPAIATPEGVAKDGERERGLLGAYP
CPRPETFSLTQSSVSEKKLTRNNYRARMHELLCVEEMARYEQVARYNLTAKLRLADCYLL
APNGIATSTAKYAHLGELFALINLGKDISEDTSAGRLILTNCTSVLLADSNVSLNSGSSQ
GQLSDGTRSRPGRVVYEALIEDKGKNMIYLRLSATTVKDLRLEPDTDFVAEVQFQLNRIP
YCEWHYAIDKIADFRVVFPDTYLEPSIPWTPQRQWSEILDSRLNLKQKEAVVAITTPVNC
PLPPILIIGPFGTGKTYTLAQAIKQLLIQPKARVLVCTHSNSAADLYIKEYLHPYVEEGH
EEARPLRIYYHKRWVATVNQVVQKYCLIEVVGGMRTFCVPTLEDVLKHRIIVVTLSISMY
LSSLGLPKGHFTHILLDEAAQAMECEAIMPLALANDDTRIVLAGDHMQLSPELFSQFAKE
RNLHVSLLERLYDHYPSTFPCKILLCENYRAHDAIIQFTSELFYDQKLVSSGNQPRHEKF
YPLTFFTARGEDVQDVNSTAFYNNAEVYEVVERVCELRKRWPPVWGKLDDQSIGIMTPYS
DQVFRIRSELRKRRMGGISVERVLNVQGKQFRAIFLSTVRTRRTCHSGTKPGAGGDEMDY
GFLSNSKLLNTAITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICDQNKSLFGITWLYL
RSQLDGVELKKTYVLNPLAPEFVPRRYLAESYINLPPPLLAPGVAPPPPFRLPPAPFPPC
VYPFPPVYYCRPPPPPPPPPPLPFNPWALNYPLVSPGGWQAAAVAVLASPGEKRPAAEGG
SAPEAPGDPPGFAAARPCADKPEQIQFLRNVHFPEKLPPLSQLFMNGHGPPRPAVVPPSL
PVPQSKQLEWSHLADASGVEAATKFMELLSLGSADGQAKLAQVPASRAAPSSGRLPPHCD
ESFPARPPQGSAKDDALWRGAAGGAEDLPREARRSAPLYRRQPQCDGSGAGSSSSGAFAG
YARAAVGSLRPAAAGDAGGSATYASVLRADPRRAPDQDPFVVLRALGSKGMQGASGLYHH
FS
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattagaagtccaagcttacgaactgttgcgacgccgcgagtggttccgtgca
gctgaactgtttgatcagcttttgtctccggttttccttaaaagcgtctctgctgcaaaa
atcgtgtgttttttactcggccgcgccgaatgcatgcatgagttgggtcagcacgaaacg
gtggtctcggactgccgacacgttctgaaacttcttggcgaagtccacagtatcgggaac
tacggcatcattgcacggcgatgtctggttcactcgctgttcgccctcgggcgtttcacc
gaagcagaggcagtagctcgcgagtggctgacgacgggaggagggccatccaatcagccc
gaagccctgaaaatgcttgagcgattgaggatagtttcgcaaatgtcaaatccccgcagg
tcatgcagcgaaggggacagcatggacaatcatgtgggtgtgaacagtgtggagcattgg
ccggaacagctttcgaaacagaggaagcacccagttcgtttgttaaacgattttagtgaa
aaaacaagtaatgataatttagttcagaaaaatcaccaagaagtctttcatagagaagaa
gcaatgttaacaggatcagcaaattatgaatttcatgctgatcatgcgggaccggggcgc
gacgcaaacgtctgctcgtactgctgcctggcgttcgcgtcgcgtgctgacctgcaggcc
cactgccagtccgacggccaccagacggtggtgatgtcggacgagggccgggactgggag
tggcggccgcccccgcgcgggctcaccgccgacgcctacaccctgtgcgagggcgcgccg
tgccgctacggggcgctgtgcgtcgaggcgcacggcccggaggagctggccgagtggcgc
gagcgcttccgctaccgctccatgaaggtgcagcgggcctacgagaaggagctgttcggc
aagtcctacacggagcagctgctcgagaggtgggtccaggcggccagcccagagaaaatc
atgcgggagtcggtgtctggagttgaagagacttgtagcgatgagttggtgacgacggtg
gcatcgaaaaccagccacaaacagtggctgtttgtactgaaaactaacaagctgttacga
atagttgccttgttgcaagatgcccatcgtaaccatttcgccatcaagtacgtgtcgacc
agggatttattccgtaacgttctgtcggagtggtcgccgagtaacgaccaggagtggagt
gtcccggccatccccggcattgagcagggcgaggaacagcccgccccgccctacttgcac
caccacgtgaagatagagttcgcgacggacatctacgggacgttccggcagtctgtggtg
ttcgacttcggggaggagcccgtgctggtgcgccacctgtgtgtcgacgtcgttccggtg
acggacgtcgatcgcttgaaggagatctgcaaggagctggtgatctcaacgtcggagcgc
tgggacgccgccaactccgacgtcgtgccgttctcgtcgtccgtcacgcccgccatcgcc
accccggagggcgtggccaaggacggggagcgggagcgggggctgctgggcgcgtacccc
tgcccaaggccggagaccttctccctcacgcagagctcggtgtcggagaagaagctcacc
aggaacaactaccgggctcgcatgcacgagctgctgtgcgtcgaggagatggcgcgctac
gagcaggtggcgaggtacaacctgacggccaagctgcgcctggccgactgctacctgctg
gcgcccaacgggatcgccaccagcaccgccaagtacgcgcacctcggcgagctcttcgcg
ctcatcaacctgggcaaggacatctccgaggacacctcggcgggccgcctcatcctcacc
aactgcaccagcgttctgctggctgattccaatgtttcgttgaactcgggctcgtcccaa
gggcagctgtcggacgggaccaggagccggccaggccgggtggtctacgaggcgctgatc
gaggacaagggaaagaacatgatctacctccggctgtccgcgaccaccgtcaaggatctc
cgcctggagccggacaccgacttcgtggcggaggtgcagttccagctgaacaggatcccg
tactgcgagtggcactacgccatcgacaagatcgccgacttccgggtcgtattcccggac
acgtacctggagccgagcataccctggacaccgcagaggcagtggagcgaaatcttggat
tcgcggttgaacctgaagcagaaagaagcggtcgtggctatcaccaccccagtcaactgc
cctttaccgcccattctgatcataggtccattcggaactgggaaaacttacacgctcgcg
caggcaatcaaacagttgctgattcagccaaaagctcgtgttctggtatgcacacattcc
aacagcgcggcggacctgtacatcaaggagtacctccacccgtacgtggaggagggtcac
gaggaggcgcggcccctgaggatatactaccacaagcggtgggtcgccaccgtcaaccag
gtggtgcagaagtattgcctgatcgaagtagtcggtgggatgaggacgttctgtgtgccg
accttggaggacgtgttgaagcaccgcatcatagtggtgaccctgagcatatccatgtac
ctgtcttctctcggtcttccgaaaggacacttcacgcacattctgctggatgaggcggca
caggccatggagtgcgaagccatcatgcctctagcgctggccaatgacgacactaggata
gtgctcgctggtgatcacatgcagttgagcccggagctgttttctcagttcgcgaaggag
cgaaatctccacgtgtcccttctggagaggttgtacgaccactatccctcgacgttcccg
tgcaagatcctgctgtgtgagaactacagagctcacgatgcgatcatccagttcacgtcg
gagctgttctacgaccagaagctggtgagcagcggcaaccagccccgccacgagaagttc
taccccctgacgttcttcacggcgcggggcgaggacgtgcaggacgtcaactccacggcg
ttctacaacaacgcggaggtgtacgaggtggtggagcgcgtgtgcgagctcaggaagcgc
tggcccccggtgtggggcaagctggacgaccagagcatcggcatcatgacgccgtactcg
gaccaggtgttccggatccgctcggagctgcgcaagaggcgcatgggcggcatctcggtc
gagcgagtcctcaacgtgcaagggaagcagttccgcgccatcttcctgagcacggtgcgg
accaggcgcacctgccactcggggaccaagcccggcgcgggcggcgacgagatggactac
ggcttcctgtccaactcgaagctgctgaacacggccatcacgagggcccagagcctggtg
gccgtggtgggcgaccccgtcgcgctctgctccatcggcagatgtcggaaggtgtgggag
cgcttcatcgagatctgcgaccagaacaagagcctgttcggcatcacgtggctctacctg
aggagccagctggacggcgtggagctgaagaagacctacgtcctgaaccctctggccccg
gagttcgtcccccggcgctacctggccgagtcgtacatcaacctgccccctccgctgctg
gcccccggggtggcccccccgccccccttccgcctgcccccggcgcccttccccccctgc
gtgtacccgttcccccccgtgtactactgccgcccgccgccgcccccgccgccccctccg
ccgctgccgttcaacccgtgggcgctgaactacccgctggtgtcgcccgggggctggcag
gccgccgccgtggccgtgctggcgtccccgggcgagaagcggccggccgctgaggggggc
tcggcccccgaggctcccggggacccgccggggttcgcggcggcgcggccgtgcgccgac
aagcccgagcagatacagttcctgcgcaacgtgcacttccccgagaagctgccgcctctc
agccagctcttcatgaacggtcacgggccgccccgtcccgccgtggtgcccccgtccctc
ccggtgccgcagtccaagcagctcgagtggtcccacctggccgacgcttcgggcgtggag
gcggccaccaagttcatggagctgctctcgctggggagcgccgacggccaggcgaagctc
gcgcaagtccccgcctcccgggccgcgccgtcctcgggccggctgcccccgcactgcgac
gagtccttcccggcccggcccccgcaggggagcgcgaaggacgacgccctgtggcgcggc
gcggcggggggggcagaagatttgccgcgggaggcgcggcgctccgcccccctgtaccgc
cgccagccccagtgcgacggctcgggagcgggcagcagcagcagcggggcgttcgcgggc
tacgcccgggcggcggtggggagcctgcggcccgcggcggccggcgacgctgggggctcg
gccacgtacgccagcgtgctccgggccgacccccgcagggcccccgaccaggaccccttc
gtcgtcctgcgggcgctgggcagcaagggcatgcagggcgcgtccggcctctaccaccac
ttcagctag
DBGET
integrated database retrieval system
