Bacillus rossius redtenbacheri: 134538461
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Entry
134538461 CDS
T09888
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134538461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bror03021
]
134538461
03041 Spliceosome [BR:
bror03041
]
134538461
03036 Chromosome and associated proteins [BR:
bror03036
]
134538461
Transcription machinery [BR:
bror03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
134538461
Spliceosome [BR:
bror03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
134538461
Complex B
134538461
Complex C
U2 SnRNP specific factors
134538461
Chromosome and associated proteins [BR:
bror03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
134538461
TFTC complex
134538461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
WDR55
Beta-prop_EML
DUF7343
Motif
Other DBs
NCBI-GeneID:
134538461
NCBI-ProteinID:
XP_063235861
LinkDB
All DBs
Position
13:complement(39993965..40137490)
Genome browser
AA seq
1216 aa
AA seq
DB search
MHLYNLTLQRATGITHAVHGNFSGTKQQEVLVSRGKSLELLRPDANTGKVHTLYTVEVFG
IVRSLMSFRLTGGTKDYIVVGSDSGRIVILEYVPAKNVLEKVHQETFGKSGCRRIVPGQH
LAIDPKGRAVMISAVEKQKLVYIMNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADMDPTGEAAHKTQQTLTFYELDLGLNHVVRKYSEALEEHANFLVSVPG
GYDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACQVADLANEDT
PQLYMLCGRGPRSTVRVLRHGLEVSEMAVSELPGNPNAVWTVKRRADEDYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEEALMQIYPDGIRHIRADKRINEWKTPG
KKMIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMPSEAVCMALANVPAGEQ
RSRFLAVGLADNTVRIISLDPADCLSPLSMQALPAAPESLCIVEMGTGEAGPEGEPGARG
VLYLNIGLQNGVLLRTVLDQSKGDLADTRTRYLGSRPVKLFRIRMQGSEAVLAMSSRSWL
SYYYQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFPV
DYTPRKFVIHQDSSHLIITETEHNAYTEETKKQRRIQMAEEMQEAAGEEEQELAREMAEA
FLNEDLPEHTFSAPKAGPGMWASVIRLLDPVEGRTEQVVKLDQNEAALSIALVKFSNQPD
NQYVVVGVAKDYQLNPRQVGGGFLYTYKVNADCTNMELLHKTVMDEVPLAICPFQGKVLI
GVGRMLRLYDLGKKKLLRKCENKHIPNLIVNIQAMGQRVFVSDVQESLYFVRYKRQENQL
IIFADDTHPRWVTAATMLDYDTVATADKFGNIAVIRLASNVTDDVDEDPTGNKALWDRGL
LNGASQKASVIANFHVGEICMSLQKATWIPGGSESLVYTTLSGTVGVLVPFTSHEDQDFF
QHLEMHMRSENPPLCGRDHLSFRSYYYPVKNVLDGDLCEQYNSIDVSKQKSIADDLDRTP
SKVSEKLEDIRTRYAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgtacaacctgacgctgcagcgcgccacgggcataacgcacgcggtgcacggc
aacttcagcggcacgaagcagcaggaggtgctggtgtcgcggggcaagtccctggagctg
ctgcggccggacgccaacacgggcaaggtgcacaccctgtacaccgtcgaggtgttcggg
atcgtgcgctcgctcatgtccttccggctcacgggcggcaccaaggattacattgtggtt
ggatcagattctggaagaattgtcatcttggaatacgtcccagccaagaatgtcttggag
aaagtccaccaagagacgtttggcaagagtggttgccgcaggattgtcccgggccaacac
ttggctattgatccgaaaggcagagctgttatgattagtgcagtggagaagcagaagctg
gtgtacataatgaacagagacgcggaggccaggctgaccatctcgtcgcccctggaggcc
cacaagagcaacaccctcgtgtaccacactgtcggggtggacgtgggctttgagaacccc
atgttcgcctgtctggagatagactacgaggaggcggacatggaccccacgggggaggcg
gcccacaagacgcagcagacgctgaccttctacgagctggacctgggcctgaaccacgtg
gtgcgcaagtacagcgaggcgctggaggagcacgccaacttcctggtgtcggtgccgggc
ggctacgacggccccagcggcgtgctcatctgctcggagaactacctcacctacaagaac
ctgggcgaccagcacgacatccgctgccccatcccccgacgcaggaatgaccttgatgat
ccggaacgagggatgatatttgtgtgctctgccactcacaagactaagtcgatgtttttc
tttttggcacaaacagagcaaggtgacatcttcaagatcactttagaaactgatgaagat
atggtcactgaaatcaagctcaagtattttgacactgtccctgtggccactgcaatgtgt
gtcctgaagacaggctttttgtttgtggcatcagaatttggcaatcactacttgtaccaa
attgcacacctgggagatgatgacgacgaaccagagttcagttctgccatgcctctggaa
gagggcgacacattcttcttcgcaccgcggcctttgcgcaatcttgttttggtggatgag
atggactccctctctcccatactggcctgtcaagttgcagacttggcgaacgaggacacg
ccgcagctgtacatgctgtgtgggcgcgggcctcgctccaccgtcagggtgctgcgccac
gggctggaggtgtcggagatggcagtgtcggagctgccgggcaaccccaatgctgtctgg
accgtcaagcgcagggccgacgaggattatgacgcatacatcatagtatcatttgtgaat
gcgacactggtgttgtctatcggggagactgtggaggaggtgacggactctggcttcctg
gggaccactccgaccctgtcctgctccgctctgggagaggaggcgttgatgcagatctat
cccgatgggatcagacacattcgtgcagacaagcgtataaacgagtggaagactccgggc
aagaagatgattgtgaagtgtgctgtgaaccagcgccaggtggtgattgctctgacggga
ggcgagctggtctattttgaaatggatcccacaggccaattgaacgagtacacggagcgg
aaagagatgccgtctgaagctgtgtgtatggcactggcgaatgttcctgcaggcgagcag
aggtccaggtttctggcagtggggcttgctgataacacagtccgcatcatctctcttgat
cctgctgactgcctgtcgcccctgagcatgcaggcgctgccggcggcgccagagtcgctg
tgcatagtggagatgggcacgggcgaggcggggcccgagggggagccgggggcccggggc
gtgctgtacctcaacatcgggctgcagaacggcgtgctgctgcgcaccgtgctggaccag
tccaagggcgacctggcggacactcgcacgcgctacctgggctcccgccccgtcaagctg
ttccgcatccgcatgcagggcagcgaggccgttcttgctatgtcgagtcgctcgtggctg
agctactactaccagaacagattccacttgacaccgctgtcttacgaatctctggagtat
gcttctggtttctcatctgagcaatgccctgaaggcattgtagccatttccacaaacaca
cttcgaatattggcgcttgaaaaacttggagcagtcttcaaccaggtgtcgtttccggta
gactacactcctaggaaatttgtaatccatcaggattcttctcatttgataatcacagag
actgaacacaacgcatacactgaggaaacaaaaaagcagaggaggatacaaatggcagag
gagatgcaggaggcggccggcgaggaggagcaggagctggcccgcgagatggcagaggcc
ttcctgaacgaggacctgcccgagcacacgttcagcgcgcccaaggcggggccgggcatg
tgggcctccgtcatccgcctgctggaccccgtcgagggccgcaccgagcaggtcgtcaag
ctggaccagaacgaggccgccctcagtattgctctggtgaagttctccaaccagcctgac
aaccagtacgtggtggtcggagtggccaaggattaccagttgaaccctcggcaagtcggc
ggaggatttctctacacgtacaaggtgaacgcagattgcaccaacatggaactactgcac
aagacggtgatggatgaagtcccgctggcgatttgtcctttccagggcaaggtcttgatt
ggcgttggtcgcatgttgcgcttgtacgatctcggcaagaagaaacttctgcgcaagtgt
gaaaacaagcacatccccaacctgatcgtgaacatccaggcgatgggccagcgagtgttc
gtgtcggacgtgcaggagagcctctacttcgtgcgctacaagcgacaggagaaccagctc
atcatcttcgcggacgacactcaccctcgctgggtgacggccgccacgatgctggactac
gacacggtcgccaccgcggacaagttcggcaacatcgctgtgatccggctggccagcaac
gtcaccgacgatgtggacgaggatccgaccggcaacaaggccctgtgggaccgcggcttg
ctcaacggcgcctcgcagaaggccagcgtcatagccaacttccacgtgggggagatatgc
atgtcattgcagaaggccacgtggatcccggggggcagcgagtccctggtgtacaccacg
ctgtccggcacggtgggcgtgctggtgcccttcacctcgcacgaggaccaggacttcttc
cagcacctggagatgcacatgcggtcggagaaccccccgctgtgcggccgcgaccacctg
tcgttccgctcctactactaccccgtcaagaatgtcttggatggagatttatgtgagcag
tacaactctattgacgtatcaaagcaaaagagcattgctgatgatttggacagaactcct
agcaaagtttcagagaaactagaagacataagaactcgctatgcgttttaa
DBGET
integrated database retrieval system