Bacillus rossius redtenbacheri: 134538868
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Entry
134538868 CDS
T09888
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134538868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bror03021
]
134538868
Enzymes [BR:
bror01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134538868
Transcription machinery [BR:
bror03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
134538868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
134538868
NCBI-ProteinID:
XP_063236510
LinkDB
All DBs
Position
14:complement(46905473..46970249)
Genome browser
AA seq
1703 aa
AA seq
DB search
MEFPRMNAVSASFSLFSGEEIKKLSVVRISTPLVFNVLGHPLPGGLYDPSLGPMSERSDP
CKTCHRNYTLCPGHFGYIELPLPVVNPMYYKHVYTLLRMLCLSCRAFQVPEYLRHLLSTQ
LELLDAGLLSEAQDAELVVAEAVASCKQPSALHEEAFGIAVRERLDAYRREVLGGAPDDD
QTCAQTKNTEYMRNRLMEAVWKLVAEVKKCWKCKKHIKKITSFQNRLLISVTKVETSSKF
QTSSKDPIMQSAKSKSEITMIMPTEQREYLRKMWEANADFVACLFPVLKKCSYEHPTDLF
FLDIVPVIPPRMRPVNFVDGRLVEHPQNEVYKHILEESMVLRNATKAEQAGRVDGLSEEG
KTAVEQARGATFLEKVHFVWQQIQAHVDHLLDAGFSPAVSSGKNISGLKQLMEKKEGLIR
MHMMGKRVNYAARSVITPDPYLNIDEVGVPEVFASVLTYPTRVTTWNVKELRQMIINGPK
IYPGAVMVELSGGRKVLLKHDDEMQRSSYAKRLLTQDESNANNIKVVHRHLLSGDVLLLN
RQPTLHKPSIMAHTARILPGEKTLRLHYANCKAYNADFDGDEMNAHFAQSELGRSEAYNL
LSVNNQYAVPKDGTPLSGLMQDHVISGVQISLRGRFFTREDYQQFVFVSLANKRGHIRLL
PPAILKPRQLWSGKQILSTIIINSIPKGKHPINLAGVAKIASKAWEVRKPRRWKAGGTPF
PDASTMSEAEVVVRRGELLCGVLDKAHYGATPYGLVHCMYELYGGACSGRILSSFSKLFT
SFLQRRGFTLGIEDILILDGAERERTAVIEEARKVGPEVVMSVLSLEEGDEGKVEAELEK
LYRTGVKGRAVIDRAYKTTLDTVTDKINKACLPAGLLRQFPANNLQLMIESGAKGSKVNA
MQISCLLGQIELEGKRPPLMKSCKSLPSFARLDTTPRAGGFIDGRFLTGIQPQEFFFHCM
AGREGLIDTAVKTSRSGYLQRCLIKHLEGVTVQYDQTVRDSDGSVIQFCYGEDGRDVLRA
QFLKLQHMPFLAENCQAILESEKEMTKLLDDEDMEAVQKQRRAIHKWMKKNGSVLQKRLP
RPFTRFSREVDPSTVTNSPDKLLKKQGRVRSAHKLCKMWSSEDAETRARRQRCEGRWGRC
PDPVAAAVSPARTLGAVTEQLEQVMAQYRGGKLASGRDPFQDMVYLKSLTSLAVPGEPVG
LLAAQSIGEPSTQMTLNTFHFAGRGDMNVTLGIPRLREILMIASKNIKTPSMEIPFRTDV
RRLGREAERLRRRLTRVTVSSVLEHITVTDCISLHPSRRRVYVVRLQFLPWSCYRTDYCV
KPSHILHHVEKKLVTRILTEMKKRLKFHGGLLHSENEGQRKKRNEDEDEGGEGEAVETEA
SLERMKRSSRHDDEDSSEEEFEGEEADATEARTHAKHSEEQEYDDPGDSDRDEEEEEGSA
DEEKEAGKLDNTVPDPQSRDSGEDDSDEEDEDKVPLVEEHSGKVRRSHVVGIHTFVEDYE
YDKENELWCEITFGLPLMKKKLDMSTLLRNVVEKSVVWEVADIRRAFTFVSPDTGLLTLK
TEGINIHEMFKFRHLLDLDKLYTNDIYGMSQTYGIEAARRVIIKEVQDVFRMYGITVDPR
HLLLVADYMTSGGQFDPFSRKGLDLNVSPLQKMSFEASLGFLRTATLQGKTDVLKSPSSR
IMVGQPCLSGTAVCSVFQKLVVT
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggagttccctcgcatgaacgccgtgtcggcatccttctcgctgttctccggcgaggaa
ataaagaagctgagtgtggtgaggatctcgacgccgctggtcttcaacgtcctcggccac
ccgctcccgggcgggctgtacgacccgtcgctagggcccatgtcggagaggagcgacccc
tgcaagacgtgccacaggaactacacgctgtgcccgggccacttcggctacatcgagctg
cccctgccggtggtgaaccccatgtactacaagcacgtctacacgctgctgcgcatgctg
tgtctctcctgccgcgccttccaggtgccagagtacctgcggcacctgctgagcacccag
ctggagctgctggacgctggcctcttgtccgaggcccaggacgcggagctggtggtggca
gaggcggtggcgtcctgcaagcagccctccgccctccacgaggaggccttcggcatcgca
gtccgcgagcggctggacgcgtaccgccgggaggtgctgggcggtgcccctgacgacgac
cagacgtgcgcgcagaccaagaacacggagtacatgcgcaacaggctgatggaagcggtg
tggaaactcgtcgccgaggtgaagaagtgttggaagtgcaagaagcacatcaagaagatc
accagcttccagaacaggctcctcatttccgtgacgaaagtggagacctcgagcaagttt
cagacttcgagcaaagatccgatcatgcagtcggccaagtccaagtccgagataacaatg
ataatgccgaccgagcaaagggagtatctccgcaagatgtgggaggcgaacgcagacttc
gtcgcctgtctgttcccggtgctgaagaagtgcagctacgaacaccccacggacctgttc
ttcctggacatcgtgccagtgataccaccgcgcatgaggccggtgaacttcgtggacgga
cgcctggtggagcacccccagaacgaggtgtacaagcacatcctggaggagagcatggtg
ctgcgcaacgccaccaaggcggagcaagcggggcgcgtggacggcctgtcggaggagggc
aagacggccgtggagcaggcgaggggggcgaccttcctggagaaggtgcacttcgtgtgg
cagcagatccaggcgcacgtggaccacctgttggacgccggcttcagccccgccgtcagc
agcggcaagaacatcagcggcctcaagcagttgatggagaagaaggaggggctgatacgc
atgcacatgatgggcaagcgcgtcaactacgcggcgcggtccgtcatcacccccgacccg
tacctgaacatcgatgaggtgggcgtgcctgaggtgtttgcctcggtgctgacgtacccc
acccgcgtcaccacgtggaacgtgaaggagctccggcagatgatcatcaacggacccaag
atataccccggggccgtgatggtggagttgagtggcggccgcaaggtgcttctgaagcat
gacgatgagatgcagcgtagcagttacgctaaacgtcttctaacacaagacgaaagcaac
gccaacaacatcaaagtggtgcacaggcacttgctgagcggagacgtgctgctgctgaac
cgccagccgacgctgcacaagcccagcatcatggcgcacacggcgcgcatcctgccgggg
gagaagaccctgcgcctgcactacgccaactgcaaggcctacaacgcagacttcgacggc
gacgagatgaacgcgcacttcgcccagagcgagctggggcgcagcgaggcctacaacctg
ctgagcgtgaacaaccagtacgcggtcccgaaagacggcacgcctctcagtggcctcatg
caggaccacgtcatctccggagtgcagatatcgctccggggtcgcttcttcaccagggag
gactaccagcagttcgtgtttgtgagcctggccaacaagcgcggccacatacgcctgctg
cccccggccatcctgaagccgcggcagctgtggtccggcaagcagatactgtccaccatc
atcatcaactccatccccaagggcaagcatcccatcaacctggcgggcgtcgccaagata
gccagcaaggcgtgggaggtgaggaagcctcggaggtggaaggcggggggcaccccgttc
cccgacgccagcaccatgagcgaggcggaggtggtggtgcggaggggggagctgctgtgc
ggggtgctcgacaaggcccactacggggcgaccccgtacggactggtgcactgcatgtac
gagctgtacggcggtgcgtgttctggtcgcatactgagctccttctccaagctgttcacg
agcttcctgcagagacgaggcttcaccctcgggatcgaagacatcctcattctggacggg
gcagagcgggaacgcactgccgtcatagaggaagccaggaaggtcggaccggaagtcgtg
atgtcggtgctgagcctggaggagggggacgaggggaaggtggaggcagagctggagaag
ctgtatcgaacgggcgtcaaagggcgagcggtgatcgaccgggcgtacaagacaaccctg
gacacagtcacagacaagataaacaaggcgtgcctccccgccggcctgctccgccagttc
cccgccaacaacctgcagctgatgatcgagtcgggggccaagggctccaaggtgaacgcc
atgcagatctcctgcctgctggggcagatcgagctggagggcaagcggccgccgctcatg
aagtcctgcaagtccctgccgagcttcgccaggctcgacaccacgccccgcgcggggggc
ttcatcgacggtcgcttcctcaccggcattcagccgcaggagttcttcttccactgcatg
gccgggcgggagggcctgatagacacggcggtgaagaccagccgcagcggctacctgcag
cgctgcctcatcaagcacctggagggggtgacggtgcagtacgaccagaccgtcagagac
agcgacggcagcgtcatacagttctgctacggggaggacggcagagacgtgctcagggct
cagttcctgaagctgcagcacatgccgttcctcgccgagaactgccaggccatcttggag
agcgagaaggagatgaccaagctgctggacgatgaggacatggaggccgttcagaagcaa
cgcagagctattcacaagtggatgaaaaagaacgggagtgttctgcaaaaaaggctgcct
aggcccttcacgagattctctcgagaagtcgacccgtccacggttaccaactctccggac
aaactgctgaagaagcaggggagagtgagatcggcccacaagctgtgcaaaatgtggtcc
agcgaagacgcggaaactcgggccaggcggcagcggtgcgaggggaggtgggggcggtgc
ccggaccccgtggcggcggcggtgagtcccgcccgcaccctgggggccgtcacggagcag
ctggagcaggtgatggcgcagtaccgcggcggcaagctggcgagcggcagggaccccttc
caggacatggtgtacctcaagtccctgacctcgctggcggtcccgggcgagccagtcggc
ctgctggcggcgcagtcgatcggggagccgtccacgcagatgaccctcaacacgttccac
ttcgcggggcgcggggacatgaacgtgacgctgggcatcccccggctgcgggagatactc
atgatcgcctccaagaacatcaagactccgagcatggagatcccgttcaggacggacgtg
cggcgcctggggcgggaggcggagaggctccggcgccggctgacgcgcgtcaccgtgtcg
agcgtgctggagcacatcaccgtcaccgactgcatctcgctgcatccgtccaggcggagg
gtttacgtagtgaggctgcagttcctgccgtggtcctgctacaggacggactactgcgtg
aagccgtcgcacatactgcaccacgtcgagaagaagctggtcaccaggatcctcactgag
atgaagaagaggctgaagttccacggagggctactgcactcggagaacgagggccagagg
aagaagcggaacgaagacgaggacgaaggaggggagggggaggctgtggagacggaggcg
agtctggagagaatgaagaggtccagcagacacgatgatgaggacagctccgaagaagag
tttgagggggaggaggcagacgcgacggaggctcgcacccacgccaagcactcggaggag
caggagtacgacgatcccggggacagcgaccgggacgaggaggaggaggaaggttcggca
gatgaagagaaagaagctggtaaacttgacaacactgttcctgatcctcagtccagagac
agtggagaggatgatagtgatgaggaagacgaggacaaagttcctttggttgaagaacat
tctggaaaagtgcggagaagtcacgtggttggaattcatacatttgtggaagattacgag
tatgacaaagaaaatgaactgtggtgtgaaataacatttgggctgccgctgatgaagaag
aagctggacatgtcgacgctgctgaggaacgtggtcgagaagtctgtggtgtgggaggtg
gcggacatcaggcgggccttcacgttcgtcagcccggacaccggcctgctgaccctcaag
acggagggcatcaacatccacgaaatgttcaagttccgacatctcctggacctggacaag
ctgtacacgaacgacatctacggcatgtcccaaacgtacggcatcgaagcggcaagaagg
gtcataatcaaggaggtgcaggacgtgttcaggatgtacggcatcacggtggacccccgc
cacctgctgctggtggccgactacatgacctccgggggccagttcgacccgttcagccgc
aaggggctggacctgaacgtgtccccgctgcagaagatgtccttcgaggcgtcgctcggc
ttcctccgcaccgccaccctgcaaggcaagacggacgtgctgaagtctccgtccagccgc
atcatggtgggacagccgtgcctcagtgggactgccgtgtgctccgtcttccagaagctg
gtcgttacgtag
DBGET
integrated database retrieval system
