KEGG   Bacillus rossius redtenbacheri: 134538869
Entry
134538869         CDS       T09888                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
bror  Bacillus rossius redtenbacheri
Pathway
bror03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bror00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134538869
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bror03041]
    134538869
Spliceosome [BR:bror03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    134538869
 Complex C
   U5 SnRNP specific factors
    134538869
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 ANAPC4_WD40 Beta-prop_SPT8 eIF2A WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_RIG_2nd WD40_RFWD3 Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_Nup120_160 WD_LRWD1 Phage_min_tail
Other DBs
NCBI-GeneID: 134538869
NCBI-ProteinID: XP_063236511
LinkDB
Position
14:46971230..46973941
AA seq 350 aa
MPVTDLKRRADELAMVSVPKRARNEVSTADSGTSVVESDIGIPRYSNLAAPIMLMEGHQG
EIFTAEFHPDGKYLASAGFDRQIFIWNVYGNCENISLMSGHGGAIMELHFSTDGNTIYTA
STDHTVGLWDLETGVRIKKLKGHTTFVNSCSPVRRGPQLVVSGSDDCTVKMWDPRKRGQC
STFNNTYQVTAVAFSDTAEQVLSSGIDNDIKVWDTRKNAVAYRLKGHADTVTGLALSPDG
SYVLSNSMDNTVRIWDVRPFAPQERCVKILTGHQHNFEKNLLRCGWAPDGSKVSAGSADR
FVYLWDTTTRRILYKLPGHKGSVNDVDFHPSEPIILSGSSDKSLYMGEFE
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcctgtaacagacttgaaaagaagggccgacgagttagcgatggtctcagtacctaaa
cgcgcacggaacgaagtcagcaccgccgacagcggcacgagcgtggtggaaagtgacatc
gggatcccgaggtactccaacctcgcggctcccatcatgctgatggaaggacaccagggc
gagatcttcaccgccgagttccaccccgacggcaagtacctcgcgtcggcgggcttcgac
cggcagatcttcatttggaacgtgtacgggaactgcgagaacatctcgctgatgagcggc
cacggcggcgccatcatggagctgcacttctcgacggacggcaacacgatctacacggcc
agcacggaccacacggtggggctgtgggacctggagacgggcgtgcgcatcaagaagctg
aaggggcacacgaccttcgtgaactcgtgcagcccggtgcggcgcggcccgcagctggtt
gtcagcggctcggacgactgcacggtgaagatgtgggaccccaggaagcgcggccagtgc
tccaccttcaacaacacctaccaggtgacggcggtcgccttcagcgacaccgcggagcag
gtgctgtcctcgggcatcgacaacgacatcaaggtgtgggacaccaggaagaacgcggtc
gcgtaccgcctgaagggccacgcggacaccgtgacggggctggcgctgtcgcccgacggc
tcctacgtgctgtccaactccatggacaacacggtgcgcatctgggacgtgcggccgttc
gcgccgcaggagcgctgcgtcaagatcctcaccggccaccagcacaacttcgagaagaac
ctgctgcgctgcggctgggcgcccgacggctccaaggtgtcggcggggtcggcggaccgc
ttcgtgtacctgtgggacacgaccacgcgcaggatcctgtacaagctgcccggccacaag
ggcagcgtcaacgacgtggacttccacccctccgagccgatcatcctgtccggctccagc
gacaagtccttgtacatgggcgagttcgagtag

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