Bacillus rossius redtenbacheri: 134539084
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Entry
134539084 CDS
T09888
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror04512
ECM-receptor interaction
bror04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134539084
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134539084
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bror04147
]
134539084
00536 Glycosaminoglycan binding proteins [BR:
bror00536
]
134539084
Exosome [BR:
bror04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
134539084
Glycosaminoglycan binding proteins [BR:
bror00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134539084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
134539084
NCBI-ProteinID:
XP_063236884
LinkDB
All DBs
Position
14:6212927..6290666
Genome browser
AA seq
2118 aa
AA seq
DB search
MGLRWLAALACLAWGASGQYRPPHNGSGSVGPYGRASPDSYDRRDGDIYHERGDIDTYDQ
TTTEGPEEDEDSYDQEGAGTEAAGGYDPYSGGRRRTDYSSGGGSGTYGRAGYPGGGSGTY
GSSGTYGSPGSPGEDGTPGEAGEPGRSDGYGSSRGYGSSGSYGNSGGYGSPGSPGEDGTP
GEAGEPGRSDGYGNSVSYGSSRGYGSSGTYGRSGGYGSPGSPGEDGTPGEAGEPGRAGGY
GSSRGYGSSGSYGSSGTYGNSGGYGSPGSPGADGTPGEAGEPGRVGGYGSSRGYGSSGSY
GSSGTYGGSGGYGSPGSPGADGTPGEAGEPGRAGSYGSSGGYGSSGSYGSSGRVGSGGYG
GAAGGSGGDQSSSGASWSYGNSGSSSYNTFPVLGPDGRPRGNCTGSGCCIPKCFAEKGSR
GSPGLPGLTGPKGQQGFPGTEGLPGSKGDKGEPGPQGTRGPKGDRGKMGMPGFPGINGIP
GLQGPPGSPGLPGLDGCNGTDGSPGLPGLPGESGPRGFPGQPGRSGPKGEPAYAGPYPKG
EKGEPGLDGVRGPPGNPGQEGLPGRAGLKGEIGPMGPQGLPGHKGEKGNMGLGYEGLKGQ
KGVKGERGPEGRPAILPATGQKGVNVGPKGEPGNKGDTGEQGPQGQKGEPGMTGDSGVPG
QIGMIGEKGLPGPAGPRGRDGFSGPPGPLGQKGDRGPDGLPGLNGQPGPKGEPGYDGPAG
PPGLRGPPGPPGGGLGRPGPPGPVGPRGYPGPRGPKGDDGWPGQPGLRGPTGPIGGPGVS
GQPGLEGLPGEKGAKGEPGLIGYPGQEGQIGYPGPPGPAGPRGFPGEKGASITGPKGLDG
IPGRNGEKGAKGEKGYPGPHGIPGDSVNGIPGLPGPSGARGEPGTPGRPGVQGPKGEPGF
AGRPGGTCAACLPGLNGEKGDRGLDGVPGLQGQRGPSGERGYPGVPGEDGLPGPVGLPGL
SGEPGIPGIPGSQGQKGDSPTLPANQVIYPAGDKGDRGEPGRPGPVGPRGLPGIKGDRGL
PGLPGIKGDTGERGFPGQDGIPGQPGYPGSKGDKGFSIKGDMGPSGLPGGRGEKGEPGYK
GTKGEPSNCPTPSDIRDKIKGAKGVSGEKGEPGPPGRDGYPGEKGLQGLRGDSGPQGPQG
LPGPVGPRGLPGPRGDKGDAGPMGFPGEPGRDGTRGMPGLSVKGDKGEQGVPGIGPPGPA
GPEGVKGERGLPGPAGKYGIPGSPGLQGLQGEKGDRGSDGLDGLPGSIGPKGDPGPWGPV
GPAGAPGLSGRDGTKGEPGLPGEPGRPGLAGFPGPKGNAGVPGADGPKGFQGQRGRPGDP
GPPGMDCFQGPPGEKGARGPDGFPGEQGFDGPAGLPGPAGLKGDMGPVGPAGISGLPGFT
GPKGDRGLPGPQGRKGDAGLVSEKGQKGEPGIPGLRGPEGRPGLDGLPGAKGDAGLPGIG
RPGIPGTKGERGVPGIDGLPGQYGDKGDKGYPGLPGAKGEAGLPGLYGETGPPGLDGLPG
PVAELGPQGPQGLPGVKGERGFPGRNGMDGPKGDQGLPGPFGPVGLPGQIGDKGDRGPPG
PMETVKGEKGEPGPSGLPGRPGAKGERGFDGIPGRDGEKGVQGLPGPRGLSGPMGAPGAK
GETGMEGIVGPPGLTVKGEKGLPGLPGKNGRHGAPGLVGQKGEQGLPGLPGMKGETGWPG
PLGPAGEKGDRGLEGPPGQPGLDGAPGLPGRDGTPGIPGEKGELGPPGLYGAPGQKGEAG
PPGRDGFPGTPGAKGDRGLDGRPGPPGAPGEKGDRGFPGQPGLAGERGFPGDRGDKGERG
VGLLGQKGERGPPGIPGRHGERGPPGLDGLSGLPGPKGEPGLPGLEGLPGPLGPPGPQGE
MGLDGIAGAQGQRGDIGLPGEPGQPCETQGDYTTGILLVKHSQSPEVPACEPGHIRLWDG
YSLLYIEGNEKAHHQDLGYAGSCVRKFSTMPFLFCDFNNVCNYASRNDKSYWLSTSAPIP
MMPVEENNIRPYISRCVVCEAPANVIAVHSQGLNIPDCPRSWTGLWLGYSFVMHTAAGAE
GGGQALASPGSCLQDFRATPFIECNGARGTCHYFANKLSFWLATIEGDSQFRQPQSETLK
SGNQRMRVSRCQVCIKNT
NT seq
6357 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgcggtggttggcggcccttgcgtgcctggcttggggtgcctcagggcagtac
cgccctccgcacaacggctccggctctgtggggccgtacggccgcgccagcccggacagc
tacgacaggcgggacggcgacatctaccacgagcggggtgacatcgacacctatgaccag
acgaccacggagggccccgaggaggacgaagattcctacgaccaggaaggcgcggggacc
gaggccgccggcggctacgacccgtactctgggggcaggagaaggacagactactcctcc
ggtggtggttcggggacatacggccgcgccggataccctgggggagggtccgggacctac
ggttcctctggcacttatggcagccctggttccccaggtgaagatggaacacctggtgag
gcaggcgaacccggaagatcagacggttatgggagttccagagggtacggctcctctggg
agttatggcaattctggtggatatggcagccctggttctccaggtgaagatggaacacct
ggtgaagcaggcgaacccggaagatcagacggttatgggaattccgtaagttacggctcc
tccagaggttacggctcgtctggcacatacggcagatctggcggctatggcagccctggt
tccccaggtgaagatggaacacctggtgaagcaggggaacccggaagagcaggcggttat
gggagttccagaggttacggctcttccgggagttatggttcctccggcacgtatggcaat
tctggcgggtatgggagccctggttcccccggtgcagatgggactcctggcgaggcaggg
gaacccggaagagtaggaggatacggaagttccagagggtacggctcctctgggagttat
ggctcctctggtacctatggcggttctggtgggtatgggagccctggttcccctggtgca
gatgggacacctggagaggcaggggaacctggaagagcaggcagttacgggagttccggt
gggtacggctcctccgggagttatggctcctccggcagggtagggtccggtgggtacggc
ggggcggcgggcggctctggcggtgaccagagcagctctggggcttcgtggagctacgga
aactccggcagcagcagctacaacacattcccagtgctggggcctgacggccggccgcga
ggaaactgcacgggctcaggctgctgcatccccaagtgctttgctgagaagggatctcgg
ggttctcccggactgccaggcctgacgggacccaaaggacagcaagggttccccggcacg
gaaggacttccgggatcgaagggcgacaagggcgagccagggccccaggggacaagagga
ccaaaaggagacagaggcaagatggggatgccgggatttcccggaatcaacggtattcca
ggactgcagggtccacctgggtcacctggacttcccggacttgacggttgcaatggcaca
gatggatctcctggcttgcccggcctgccgggcgagagcggaccccgtggcttccccggg
cagccggggcggtcgggccctaaaggggagcccgcctacgcgggaccctaccccaagggc
gagaagggtgagccgggactcgacggcgtgcggggcccgcccggcaaccccgggcaggag
ggcttgccgggccgagcgggcttgaagggagagatcggaccgatgggcccgcaagggctg
ccgggccataagggcgagaagggcaacatgggactgggctacgagggcctgaaagggcag
aagggagtgaagggcgagcggggaccggaaggcaggcccgccatcctgcccgccaccgga
cagaagggcgtcaacgtcggcccgaagggagaaccaggcaacaaaggagacaccggcgag
caaggccctcagggccagaagggcgagccgggaatgaccggcgactcgggagtgcccggg
caaatcggaatgatcggcgagaaaggactgcccgggccagccggtcccaggggccgggac
gggttctcgggcccgccggggccgctgggccagaagggcgaccgcgggccggacggactg
ccggggctgaacggccagcccgggcccaagggggagccgggttacgacggtcccgcggga
cctccgggcctccggggaccgccgggccctcccgggggtggtctgggccggcccgggccg
cctggtccggtcggaccgcgggggtaccccggaccgcgaggccccaagggagacgacggg
tggcccggacagccgggacttcgcgggcccacgggtcccatcggaggccccggagtgtct
ggtcagcctgggctggaaggacttcccggagagaagggcgcgaagggagagccgggactc
ataggataccccggccaagaagggcagatagggtacccgggacccccgggccccgcaggg
ccaagaggtttccccggcgagaagggagcgtccatcacgggacctaagggcttggacggc
atcccaggacgcaatggcgagaagggggcgaagggagagaagggctacccagggccgcac
ggcatcccgggagactctgtgaacggcattcccggactgcccggaccatcgggggcccgc
ggagagcccggcaccccaggaagacccggagtccagggacccaaaggagagccggggttc
gccgggcgcccgggcgggacgtgtgcggcctgcctcccggggctgaacggcgagaagggc
gaccgggggctggacggagtgccggggctgcagggccagaggggtccctccggggagagg
ggctaccccggggtgcccggcgaggacgggctgcccggcccggtgggactccccggtttg
tcgggagagcccgggatcccgggaatcccggggtcgcaagggcagaagggagactcgccg
acgctgccggccaaccaggtgatctaccccgcgggcgacaagggcgaccggggggagccc
gggcggccgggccccgtcggaccgcgggggctgccggggatcaagggcgaccgcggcctg
ccagggctgcccggcatcaagggagacacgggcgagagaggcttccccggccaggacggc
atcccgggccagcccggctacccgggcagcaagggggacaagggcttcagcatcaagggc
gacatggggccctcgggcctcccaggcgggcgcggcgagaagggcgagccgggctacaag
ggcaccaagggcgagcccagcaactgccccacgccgtccgacatcagggacaagatcaag
ggcgcgaagggcgtatccggggagaagggcgagccgggtccgccgggcagggacggctac
ccgggagagaagggactccaagggctgaggggagactccggaccgcagggaccgcaaggc
ctgccgggaccggtgggcccacgcggcctgccggggccccgcggagacaagggagacgcc
ggaccaatgggcttccccggagagccgggacgggacggcaccaggggaatgccaggactg
tcggtcaaaggcgacaagggggagcagggcgtgcccgggataggtcccccgggaccggcc
ggccccgagggcgtgaagggggagagggggctgcccggacccgccgggaagtacggcatc
ccgggaagcccagggctgcaagggctgcagggcgagaagggtgacaggggcagcgacggc
ctggacggactgcccgggagcatcgggccgaagggagacccggggccctggggcccggtg
ggacccgcgggggcgcccggcctgtccgggcgcgacggaaccaaaggagagcctggcctg
cccggagagcccgggcgaccggggctcgccggcttcccgggccccaaaggaaacgccggc
gttcccggcgcggacggtcccaaaggattccaaggacaacgcggacgacccggcgaccca
gggccgccgggcatggactgcttccagggccccccgggcgagaagggggcccgggggcca
gacggcttccccggggagcaaggcttcgacggcccggccggactgcccggccccgcgggc
ctcaagggcgacatgggcccggtcgggccggcaggcatctccgggctgcccggcttcacg
ggacccaagggagaccgggggctgccaggaccacagggcaggaaaggtgacgccggcctg
gtgtcggagaaggggcagaagggcgagcctggtattcccgggctccgcgggcccgagggc
cgccccggcctcgacggcctgcccggggccaagggagacgccggcctgccggggatcggc
cggcccgggatccccgggacgaagggcgagcgcggggtgcccgggatcgacggcctcccg
ggccagtacggagacaagggcgacaaggggtacccggggctgcccggagcgaagggagag
gcgggactgccgggtctgtacggcgagaccgggccccctggccttgacggcctgccgggg
cccgtggcagagctcggcccgcagggaccccagggactgccgggcgtgaagggggagagg
ggctttcccggacggaacggcatggacggacccaaaggagaccaaggactccccggtccc
ttcggcccggtggggctgcccggccaaatcggcgacaagggcgaccgcggcccgccgggg
cccatggagaccgtcaagggggagaagggcgagcccgggccatcgggactgcccggccgg
ccgggcgccaaaggagagcgcggcttcgacggcatcccgggcagggacggcgagaaggga
gtgcagggcctgcccggaccccggggcctcagcgggcccatgggagcacctggggctaaa
ggagaaacgggcatggagggaatagtggggccgcccggcctcaccgtcaagggggagaag
gggctgccgggactcccgggcaagaatggacgacacggcgcccccggcctggtgggacag
aagggcgagcaagggctgcccggcctgcccggcatgaagggcgagacgggctggcccggg
ccgctggggccggccggggagaagggcgaccggggactggagggcccgccgggacagccg
ggcctggacggggcccccgggttgccgggacgggacggcacgcccgggatcccgggcgag
aagggggagttggggccgcccggcctgtacggcgccccgggacagaagggagaagcggga
ccgccaggacgggacggcttccccgggacgccgggcgcgaagggggaccggggcctcgac
ggacggcccggcccgcctggcgcgccgggcgagaagggcgaccgagggttcccgggacag
ccggggctcgccggggagcggggcttccccggggaccggggcgacaagggcgagcgcggg
gtcggcctgctcggccagaagggcgagcggggcccgccagggataccgggccgccacgga
gagcgcggcccgccgggactggacggactgtcgggactgcccggaccgaagggagagcca
ggcctgcccggactcgagggactgcccggaccgctgggcccgccgggcccccagggagag
atgggactcgacggcatcgcgggagcgcaggggcagcggggagacatcggcctgcccggg
gagccgggccagccgtgcgagacgcagggcgactacaccaccggcatcctgctggtgaag
cacagccagagcccggaggtgccggcgtgcgagccggggcacatccggctgtgggacggc
tacagcctgctgtacatcgagggcaacgagaaggcgcaccaccaggacctaggctacgct
ggctcctgcgtgaggaagttcagcaccatgcccttcctgttctgcgacttcaacaacgtg
tgcaactacgccagccgcaacgacaagtcctactggctgtccacgtccgcacccataccc
atgatgcccgtcgaggagaacaacataagaccgtacatttcgaggtgcgtggtttgcgag
gcgccggccaacgttatcgcggtccacagccagggactgaacattccggactgccctcgc
agttggacgggactctggttgggctacagtttcgtcatgcacactgcggcgggggcggag
ggagggggccaggccctggccagccccggctcctgcctccaggacttccgcgccacgccc
ttcatcgagtgcaacggggcgcgcggcacctgccactacttcgccaacaagctcagcttc
tggctggccaccatcgagggcgacagccagttccgccagccccagagcgagacgctcaag
agcggcaaccagcgcatgcgcgtcagccggtgccaggtgtgcatcaagaacacgtag
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