Bacillus rossius redtenbacheri: 134539459
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Entry
134539459 CDS
T09888
Name
(RefSeq) ribonuclease 3-like isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134539459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134539459
03009 Ribosome biogenesis [BR:
bror03009
]
134539459
03036 Chromosome and associated proteins [BR:
bror03036
]
134539459
Enzymes [BR:
bror01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
134539459
Messenger RNA biogenesis [BR:
bror03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
134539459
Ribosome biogenesis [BR:
bror03009
]
Eukaryotic type
90S particles
RNase
134539459
Prokaryotic type
rRNA processing factors
134539459
Chromosome and associated proteins [BR:
bror03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
134539459
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Motif
Other DBs
NCBI-GeneID:
134539459
NCBI-ProteinID:
XP_063237579
LinkDB
All DBs
Position
15:41500399..41573212
Genome browser
AA seq
1183 aa
AA seq
DB search
MHIPRFTAPPPPLPTVPATAMPVPMVPPGAPPCLPPVPPPACHVNVKPGLTDPRAQPQYY
SSFPKPVANLGVPAVGPIPQHAQPFCYAPVEMPQFQQTPFGPAPHFPVRDPSQMPANCFP
EPARYVSVPAGTPFHPVQPAVNVAGPFRGNMTCSGFPPQFPVGAPVGESIGSVMAVPHSL
KYDYRVSYKESHVKESSASSSRVSEHFYHKSHDSVPVQQTGMERADKYSKGSMSDCRNTS
PHTKRRCSGERESREMSVSIMRKDSKMSRSSRGKRSESRCSSVSRRNRSSSRRRSSSRRR
SSSRRRSSSRRRSSSRRRGSSRRRSVSRRRSGSRRRSGSRRRSVSRRRRSRNRSGSRRRR
SGSRRRSSSRMSSRRRSGSRSRSGMVVQSRSSRQWEHERVFARRGSEKRSVHTSQSDSRC
EAEGGRVSPKANTAQCDGGRASPASPGRDSQGQAGDKRDGSDDTAGHRLRSHRAGSHLAA
PRSSKHSASSAARMKAADTEREMLLKKWRQSYCATSQEMRERLELLAKMTPEEILEAEKK
VWTRAAPADLFYAACETNHTVKEATPLLIKLCEEFQERLVLRAEKVRAGQVAPEAPGIKP
KKHSKHAVKDDSSDSSSNSTDEDEFTMEELRRKSQHPYRLHPELWFNDPGEMNDGPLCRC
SAKAQRCGIRHGIYSGETNMKRCDPSTNNANSLHHYRITISPPTNFLTKTPTIIKHDGHE
FIFEGFSMLSHYPLTMLPTCKVIRFNIEYTILYVEEKLPDNFTIRQLDLFYDYLFRELLE
LVDLDFRAYGDDLGCPQFHFMPRFVRDLQDNGKEILSMNVVMQYLLNNSGPLFEESSLDF
YMKMPQFEWQNFADEIKGMVVTYPGMKPCSLRVDQLDRDQHAEKPERYPEIVHFGVRPPQ
LSYAGNPEYQKAWREYVKFRHLLANMPKPSFEDKRRLEGKEMKLQEMRTQSRMKRDVTVA
VSAAGFHRTGIMCDVVQHAMLIPVLVCHLRFHRSCDALEDVIDYKFRNRYLLQLALTHPS
YRENFGTNPDHARNTLTNCGIRQPEYGDRRIHYMNTRKRGKSCCCCCCCCCCCCRCCGCC
CRCGCCCRCDCRCGCCLFFLPCLFPLVMGQITIFLDRESRFRIPESDPNVPLESKPQSQG
VKNKVMYSKCKLSTMGLEYCNPLNGCFINQVCRNSRYCNFINL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcccgaggttcacggctcccccgccgccattacccacggtgccggcaaccgcg
atgccggtgcccatggtaccgccgggggccccgccctgtctcccccccgtgccgccgccc
gcgtgccacgtgaacgtgaagccgggtttgactgacccccgcgcgcaaccgcagtattac
agtagtttcccgaaacctgtggcgaacctcggtgttccagcagtggggccgataccgcag
cacgcgcaaccgttctgctacgctcccgtggagatgccgcagttccagcagacaccgttc
ggaccggccccccacttccccgtgagagacccgtcgcagatgcccgccaactgcttcccg
gaaccagcacggtacgtgtccgtgcccgcagggacgccgttccatccggttcagccggcc
gtcaacgtggcgggtcctttccgaggaaacatgacctgcagcggtttcccaccccagttt
cctgtcggtgctcccgtgggtgagagtatcggcagtgtgatggcagtccctcactcactc
aagtacgattacagggtgagttacaaagaaagccacgttaaagagtctagcgccagcagc
tcaagagtttcggaacacttctaccacaagagtcatgattcagtgcctgttcagcagacg
gggatggaaagggctgacaagtatagtaagggaagcatgagtgattgtcggaacacaagc
ccacacaccaaacgaagatgcagtggggagagagagagcagggaaatgagtgtcagtatc
atgagaaaagatagcaagatgagtagaagcagtagggggaagagaagtgaaagcagatgt
agtagtgttagcagaagaaatagaagtagtagtagaagaagaagtagtagcagaagaaga
agtagtagcagaagaagaagtagtagcagaagaagaagtagtagcagaagaagaggtagt
agcagaagaagaagtgttagcagaagaagaagtggtagcagaagaagaagtggtagcaga
agaagaagtgttagcagaagacgaagaagcagaaatagaagtgggagcagaagacgtaga
agtggtagtaggagaagaagtagtagcaggatgagcagtagaagaaggagtggcagccgg
agcagaagtggaatggtagtacaaagtagaagtagcaggcagtgggaacacgagagggtg
tttgcgaggagaggaagtgaaaagagaagcgtgcacacaagccaaagcgacagcaggtgt
gaagctgagggcggcagggtgtcacctaaagcaaacacagcacagtgcgatggtggtagg
gccagccccgcctctcctggtagagacagccagggccaggcgggagacaagagagatgga
tcggacgacacagcaggccacaggctcaggtctcaccgggccggcagccacttggccgcg
cccagaagcagcaagcattcggccagctccgctgctaggatgaaggcggctgacacggaa
cgggaaatgctgttgaagaagtggaggcagagctactgcgccacgagccaggagatgcgc
gagcggctggagctactggccaagatgacgcccgaggagatactggaggcggaaaagaag
gtgtggacccgcgctgccccggccgacctcttctacgccgcctgcgagaccaaccacacc
gtgaaagaagccacgccgctgctgatcaagctctgcgaggagttccaggaaaggctggtc
ttgcgggcggagaaggtgcgtgcggggcaagtggcaccggaggctccaggcatcaagccc
aagaagcactcgaagcacgcagtgaaggacgactccagcgactccagcagcaactccacg
gacgaggacgagttcaccatggaggagctgaggcgcaagagccagcatccgtacaggctg
catccggagctgtggttcaacgacccgggggagatgaatgatggacctctttgtcgttgc
agtgcgaaggcacaaagatgtggcattcgccacggaatatattcgggagaaaccaacatg
aaacgctgcgatccgtcgaccaacaatgcaaacagtttacaccactatcgcatcactata
tcccctccgacgaatttcttgaccaaaacaccgacgataatcaaacacgatggtcatgaa
tttattttcgaaggattctctatgctgtctcattatccacttacgatgttgcctacctgc
aaagttatacggtttaacatagagtacacaatattgtatgtagaagaaaaacttccggat
aacttcaccatccgtcagctggatttgttttacgactacttgttccgggagctgttggag
ctggtcgacctggacttcagagcctacggcgacgacctgggctgccctcagttccacttc
atgcctcgcttcgtgcgcgacctgcaagataatggcaaggaaattctctcaatgaatgtt
gtgatgcagtatttattgaacaatagtggaccattatttgaagaatcaagtctggatttt
tacatgaagatgccacagtttgagtggcagaatttcgcggatgaaatcaaaggcatggtg
gtgacgtaccccggcatgaagccgtgctcgctgcgcgtggaccagctggaccgggaccag
cacgccgagaagccggagcgctacccggagatagtgcacttcggggtgcgcccgccgcag
ctcagctacgccggcaaccccgagtaccagaaggcatggcgggagtacgtcaagttccgc
cacctgctggccaacatgcccaagccctccttcgaggacaagcgccggctggagggcaag
gagatgaagctgcaggagatgcgcacgcagagccgcatgaagcgcgacgtcacggtggcc
gtgtcggccgcgggcttccaccgcacgggcatcatgtgcgacgtcgtgcagcacgccatg
ctgatcccggtcctggtgtgccacctgcgcttccaccgctcctgcgacgcgctggaggac
gtcatcgactacaagttccggaaccgctacctgctgcagctggccctgacgcacccctcg
taccgggagaacttcggcaccaacccggaccacgcgcgcaacacgctcaccaactgtggc
atcaggcagcccgagtacggtgaccgcaggatccattacatgaacaccaggaagagaggt
aagagttgctgctgctgctgctgctgctgttgttgttgttgtcgttgttgtggttgttgt
tgtcgttgtggttgttgttgtcgttgtgattgtcgttgtggttgttgtctttttttttta
ccttgtttatttccattagtgatgggccaaataacgattttcttggatcgtgaatctcga
tttcgaatcccagagagtgacccgaatgtacccctcgaatccaaacctcagtctcaaggg
gtcaaaaataaagtaatgtacagtaaatgtaaattatcaactatggggttggaatattgt
aaccctttaaatggttgtttcataaaccaagtctgtagaaacagtaggtattgtaatttt
attaatctataa
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