Bacillus rossius redtenbacheri: 134539595
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Entry
134539595 CDS
T09888
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134539595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bror03041
]
134539595
Spliceosome [BR:
bror03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
134539595
Complex C
U5 SnRNP specific factors
134539595
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Ortholog
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GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
134539595
NCBI-ProteinID:
XP_063237830
LinkDB
All DBs
Position
15:4608151..4668864
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AA seq
2392 aa
AA seq
DB search
MALPPYLLGPHPWATMMAQQQAAHAQLAAAAQAQAHAQAAAAHAHAHAHAAHQAHMQAQA
QQAQQAHHHGPAPAQPHKQHEVISEEKLQEKAQKWQQLQSKRFSEKRKFGFVDAQKEDMP
PEHIRKIIRDHGDMSSRKYRHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHI
TGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNV
LDVEPLEAIQIELDPDEDAAVAKWLYDHKPLVGTKYVNGSTYRRWNLTLPQLATLYRLAN
QLLTDLVDTNYFYLFDLKSFFTAKALNMAIPGGPKFEPLIKDSNPADEDWNEFNDINKII
IRQPIRTEYRIAFPYLYNNMPHYVHLSWYHTPNVVYIKTEDPDLPAFYFDPLINPISHRH
SLKATEPLPEDDEEFELAEDVSPFLQEIPLYTDNTAHGIALLWAPRPFNIRSGRCRRAID
VPLVKSWYREHCPPGQPVKVRVSYQKLLKYYVLNALKHRPPKPQKKRYLFRSFKATKFFQ
TTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNA
FHLCREILRLTKLIVDSHVQYRLNNVDAFQLADGIQYIFAHVGQLTGMYRYKYKLMRQIR
MCKDLKHLVYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGR
HSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKAN
IPWKVPGLPTPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLY
LKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILSL
ERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYS
HLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWVKPSDTEPPPLLVYKWCQGINNLQ
DVWDVTEGECNVLLESKFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMN
HTNSYGIIRGLQFASFIVQYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVATEGAH
PIRLYCRYVDRVHVFFRFTAEDARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLM
KHDVNLGRAVFWDIKNRLPRSTTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTT
HEEFTHRDGVWNLQNEVTKERTAQCFLRVDEESLQRFHNRVRQILMASGSTTFTKIVNKW
NTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELG
GLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQ
RVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFK
QYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFW
EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
GKIPTLKISLIQIFRAHLWQKVHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMN
SSCADILLFAAYKWNVSRPSLLADSKDTMDNTTTQKYWIDVQLRWGDYDSHDIERYARAK
FLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVL
RERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPI
NGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV
TRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDW
LKTISSYTAFSRLILILRALHVNTERTKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQL
KDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATT
TRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYT
YILPKNVLKKFVTISDLRAQIAGYLYGLSPADNPQVKEIRCIVMAPQWGTHQTVHLPHQL
PQHQYLKDMEPLGWIHTQPNELPQLSPQDITTHARVMAENTSWDGEKTIVITCSFTPGSC
SLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPTQGSWNYNF
MGVRHDPNMKYELQLSNPKEFYHEIHRPAHFLNFSSLEDGDGVGADREDMYA
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atggccctgccgccctacctgctggggccgcacccctgggccacgatgatggcccagcag
caggcggcccacgcgcagctggccgcggcggcccaggcccaggcgcacgcccaggcggcg
gcggcgcacgcccacgcccacgcccacgccgcccaccaggcccacatgcaggcccaggcg
cagcaggcgcagcaggcgcaccaccacgggcccgcgcccgcccagccgcacaagcagcac
gaggtcatctccgaggagaagctgcaggagaaggcccagaagtggcagcagctgcagtcg
aagcggttctcggagaagaggaagttcggctttgtggacgcccagaaggaagacatgccc
ccggagcacatccgcaagatcatccgcgaccacggcgacatgagcagccgcaagtaccgg
cacgacaagcgcgtgtacctgggggccttgaagtacatgccacacgccgtgatgaagctg
ctggagaacatgcccatgccctgggagcagatccgcgacgtcaaggtcctctaccacatc
acgggtgccatcaccttcgtgaacgagataccctgggtcatcgagcccgtctacatcgcg
cagtggggcacgatgtggatcatgatgcggcgggagaagcgggaccgccggcacttcaag
cgcatgcgcttcccgcccttcgacgacgaggagccgcccctggactacgcggacaacgtg
ctggacgtggagcccctggaggccatccagatcgagctggaccccgacgaggacgccgcg
gtggccaagtggctgtacgaccacaagcccctcgtcggcaccaaatacgtgaatgggtca
acctaccgccgctggaacctcaccctcccacagttggcaacactgtaccggctggccaac
cagctgctgacggacttggtcgacacaaactacttctacttgttcgacctgaagtccttc
ttcactgccaaggcgcttaacatggccatccccgggggccccaagttcgaacctcttatc
aaggattccaaccccgcggatgaagattggaatgagttcaatgacatcaacaagatcatc
atcagacaaccgatccgaacagaatacaggattgcgtttccttacttatacaacaacatg
ccgcactacgtgcatctatcgtggtaccacacacccaacgtggtgtacattaagacagaa
gacccggatctacctgcgttctacttcgatcccctcatcaaccccatatctcacaggcac
agcctcaaggcgacggagccgctgccggaagatgacgaggagtttgagctggcggaggac
gtgtctccgttcctgcaggagatcccgctgtacacggacaacacggcgcacggcatcgcg
ctgctgtgggcgccccgcccgttcaacatccggtccgggaggtgcaggcgcgccattgac
gtgcccctggtcaagtcctggtaccgggagcactgccccccgggccagcccgtcaaggtc
cgggtcagctaccagaagctgctcaagtactacgtgctcaacgccctcaagcaccgcccg
cccaagccgcagaagaagaggtacctgttccgctccttcaaggccaccaagttcttccag
acgacgaccctggactgggtggaggcgggcctgcaggtgtgccgccagggctacaacatg
ctcaacctgctcatccaccgcaagaacctcaactacctccacctcgactacaacttcaac
ctgaagcccgtcaagacgctcaccaccaaggagcgcaagaagtcccgcttcggcaacgcg
ttccacctgtgccgcgagatcctgcggctgaccaagctgatcgtggactcgcacgtgcag
taccgcctcaacaacgtggacgccttccagctggcagacggcatccagtacatcttcgcg
cacgtgggccagctcaccggcatgtaccgctacaagtacaagctcatgaggcagatccgc
atgtgcaaggacctcaagcacctcgtctactaccgcttcaacacgggccccgtgggcaag
ggccccggctgcgggttctgggccccgggctggcgcgtgtggctgttcttcatgcgcggc
atcacgcccctgctggagcgctggctgggcaacctgctgtcgcgacagttcgagggccgc
cactccaagggcgtggccaagaccgtcaccaagcagcgggtcgagtcccacttcgacctg
gagctgcgcgcctccgtgatgcacgacatcgtggacatgatgccggagggcatcaagcag
aacaaggccaggaccatcctgcagcatctgtccgaggcgtggcgctgctggaaggccaac
atcccgtggaaggtgccggggctgcccacgcccatagagaacatgatcctgcgctacgtg
aagatgaaggcggactggtggaccaacaccgcccactacaaccgcgagcgtatccggcgg
ggggcaaccgtggacaagacagtgtgcaagaagaacctgggccgcctcacccgcctctac
ctgaaggccgagcaggagcggcagcacaactacctcaaggacgggccgtacatctcgccc
gaggaggcggtggccatctacaccacgacggtccactggctggagtcccggaggttcgcc
cccatccccttccccccgctgtcgtacaagcacgacaccaagctgctcatcctgtcgctg
gagcgcctcaaggaggcatacagcgtgaagtcgcgtctgaaccagagccagcgggaggag
ctggggctgatcgagcaggcgtacgacaacccccacgaggctctgtcccgcatcaagcgg
cacctgctcacccagagggccttcaaggaggtggggatagagtttatggacctgtacagc
cacctggtgccagtgtacgatgtggagcccctggagaagatcacggacgcctacctggac
cagtacctgtggtacgaggcggacaagcgccggctgttccccccatgggtcaagccctcc
gacacggagcccccgcccctgctcgtctacaagtggtgccaaggcatcaacaacctgcag
gacgtgtgggacgtgactgaaggggagtgcaacgtgctgctcgagtcaaaattcgagaag
atgtacgagaagatcgacctgacgctcctcaacaggctgctgcgactcatcgtcgaccac
aacatcgccgactacatgaccgccaagaacaacgtcgtcatcaactacaaggacatgaac
cacaccaacagctacggcatcatccgcggcctgcagttcgcctcgttcatcgtgcagtac
tacggcctggtgctggacctgctggtgctggggctgcagcgggcctccgagatggccggc
cccccgcagatgcccaacgacttcctcaccttccaggacgtggccaccgagggcgcccac
cccatccgcctgtactgccgctacgtggaccgcgtgcacgttttcttcaggttcactgcg
gaggacgcgagggacctgatccagcgctacctcacggagcacccggaccccaacaacgag
aacattgtcgggtacaacaacaagaagtgctggccgcgtgacgcccgcatgcggctcatg
aagcacgacgtgaacctgggtcgagctgtgttctgggacattaagaaccgcctgccgcgc
tccaccacgaccatccagtgggagaacagcttcgtcagcgtgtactccaaggacaacccc
aacctgctgttcaacatgagcggcttcgagtgccgcatcctgcccaagtgccgcaccacc
cacgaggagttcacgcaccgggacggggtgtggaacctccagaacgaggtgaccaaggag
cgcaccgcccagtgcttcctgagggtcgacgaggagagcctgcagcgcttccacaaccgc
gtgcgccagatcctcatggccagcggctccaccaccttcaccaagatcgtcaacaagtgg
aacacggcgctgatcggcctgatgacgtacttccgggaggctgtggtgaacacccaggag
ctgctggacctgctggtgaagtgcgagaacaagatccagacccgcatcaagatcggcctc
aactcgaagatgccgtcccgcttccctccggtggtcttctacacgcccaaggagctgggc
ggcctgggcatgctgtccatgggccacgtgctcatcccccagtccgacctccgctggtcg
aagcagacggacgtgggcatcacgcacttccgctccggcatgagccacgacgaggaccag
ctgatccccaacctgtaccgctacatccagccgtgggagtcggagttcatcgactcgcag
cgcgtgtgggccgagtacgcgctcaagcggcaggaggccaacgcccagaaccgccgcctc
acgctggaggacctggaggacagctgggaccgcggcatcccgcgcatcaacacgctcttc
cagaaggaccgccacacgctggcctacgacaagggctggcgcatccgcaccgagttcaag
cagtaccaggtgctgaagcagaacccgttctggtggacccaccagcggcacgacggcaag
ctgtggaacctcaacaactaccgcacggacatgatccaggcactgggcggcgtggagggc
atcctggagcacacgctcttcaagggcacctacttccccacctgggagggtctgttctgg
gagaaggcatcaggttttgaagagtccatgaagtacaagaagctgacgaacgctcagaga
tctggtttgaaccagatcccgaaccgtcggttcacgctgtggtggtcccccaccatcaac
cgtgccaacgtgtatgttggtttccaggtgcaactggaccttaccggcatcttcatgcac
gggaagatccccacgctgaagatttccctcatccagatattccgtgcccacttgtggcag
aaagtgcacgagtcgatcgtcatggatctgtgccaggtgtttgaccaggagctggacgcc
ctggagatagagacggtgcagaaggagaccatccacccccgcaagtcctacaagatgaac
tcctcctgcgccgacatcctgctgttcgccgcctacaagtggaacgtgtcccgcccgtcg
cttctggccgactccaaggacacgatggacaacacgaccacccagaagtactggatcgac
gtgcagctgcggtggggggactacgactcccacgacatagagcggtacgcccgcgccaag
ttcctggactacaccacggacaacatgagcatctacccctcgcccaccggcctgctcatc
gccatcgacctggcgtacaacctgcacagtgcgtacggcaactggttcccgggctgcaag
ccgctgatccagcaggccatggccaagatcatgaaggccaaccccgccctctacgtgctg
cgggagcggatcaggaaggccctgcagctgtactcctcggagcccaccgagccctacctg
tcgtcccagaactacggcgagctcttctccaaccagatcatctggttcgtggacgacact
aacgtgtaccgggtcaccatccacaagacgttcgagggcaacctcaccacgaagcccatc
aacggggccatcttcatcttcaacccgcgcacgggccagctgttcctgaagatcatccac
acgtcggtgtgggccggccagaagcgcctgggccagctggccaagtggaagacggcggag
gaggtggcggcgctgatccgctccctgcccgtggaggagcagcccaagcagatcatcgtc
acccgcaagggaatgctggatcccctcgaggtccacttgctggacttccccaacatcgtg
atcaagggctcggagctccagctccccttccaggcctgcctcaaggtcgagaagttcggc
gacctcatcctcaaggccacggagccccagatggtgctcttcaacctctacgacgactgg
ctcaagaccatctcgtcgtacacggcgttctcgcgcctgatcctgatcctgcgggcgctg
cacgtgaacacggagcgcaccaaggtgatcctgaagccggacaagacgaccatcaccgag
ccgcaccacatctggcccacgctcaccgacgaggagtggatcaaggtggaggtgcagctc
aaggacctcatcctcgccgactacggcaagaagaacaacgtgaacgtggcgtcgctgacg
cagtcggagatcagggacataatcctgggcatggagatcagcgcgccgtcggcgcagcgg
cagcagatcgcggagatagagaagcagaccaaggagcagtcgcagctgacggcgaccacc
acgcgcaccgtcaacaagcacggggacgagatcatcacctccaccacgtccaactacgag
acgcagaccttcagttcgaagactgagtggcgcgtgcgagctatctctgccactaacctc
cacctccgtacgaaccacatctacgtctcgtctgacgacatcaaagagacgggatacacc
tacattcttcccaagaacgtccttaagaagtttgtgaccatttccgacctcagggcacag
atagcgggctacctgtacggcctgagccccgcggacaacccccaggtgaaggagatccgc
tgcatcgtgatggccccgcagtggggcacgcaccagacggtccacctgccccaccagctg
ccccagcaccagtacctcaaggacatggagcccctgggctggatccacacgcagcccaac
gagttgccgcagctctcgccccaggacatcaccacgcacgcccgcgtcatggccgagaac
acttcctgggacggcgagaagaccatcgtcatcacctgcagcttcacgccgggctcctgc
tcgctcaccgcctacaagctcacccccagcgggtacgagtgggggcggcagaacacggac
aagggcaacaaccccaagggctacctgcccagccactacgagaaggtgcagatgctgctg
tcggaccgcttcctcggcttcttcatggtgccgacccagggctcctggaactacaacttc
atgggcgtgcgtcacgacccgaacatgaagtacgagctgcagctgtccaaccccaaggag
ttctaccacgagatccaccggccggcgcacttcctcaacttctcctcgctggaggacggc
gacggcgtgggggccgaccgcgaggacatgtacgcctag
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integrated database retrieval system
