KEGG   Bacillus rossius redtenbacheri: 134539682
Entry
134539682         CDS       T09888                                 
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
bror  Bacillus rossius redtenbacheri
Pathway
bror03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bror00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    134539682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bror03400]
    134539682
Enzymes [BR:bror01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     134539682
DNA repair and recombination proteins [BR:bror03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     134539682
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP LIG3_BRCT DNA_ligase_A_C RNA_ligase Tim54 Permu_RdRp_palm Spectrin_5 BRCT_2
Other DBs
NCBI-GeneID: 134539682
NCBI-ProteinID: XP_063237947
LinkDB
Position
15:26983399..27437644
AA seq 1038 aa
MSVKSSVRVREGFCACPCVRLESPRIRFGVHETNFMAPAFPSDHQKLFPSHVAQLCILLK
YLDFWAVAASEANCITDVSVGIAVAIIKLREMSDAEAGGEEEGDQKKFFAERAKTGRAAC
KKCKQKLETGKLRLAKAGYNPFGPGLLKLWHHVACLFEVFSRQRKTTARIESPEDIEGWS
DLEDEDKDEILHFLPGCSRDTQSPKKRKEEASGDPKAGSKAGKQASGEGSQKAGAPLKNG
KGGGGGRDHKDNSFREFRKLCMDVENVSSYTAKTAVVEKMFTKGTDGESFKGDLLLWCRL
LLPGHVKRVYNLQSKQLVKLFSRLFRADQDEMLEDLEKGDVAETVSTFFEKSKHCQPVKK
SALTLYEVDEFLEELAKLTKEDDQIEHFQRILPRCTSNDLKMIIRLVKHDLRINAGPKHI
LEAVHPDAYQAFQTSRDLGAVLSKATTKTEAGVSSPSKKKNITITAKLMTPVLPMLAEAC
KSVEYAMKKCPNGMYAEVKYDGERVQLHKQGAEYKYFSRSLKPVVPHKVNHFKDFIPKAF
PHAKDLILDCEVLMIDTHTGKPLPFGTLGVHKKTAFKDANVCLFVFDCIYYNGEVLLDKP
IKERRKILLDNMIEIPNHVLFSEVEEVHEPKDLESLITKVLKQGLEGLVLKDLMSTYEPG
KRHWLKVKKDYLFGGAMADSADLVVLGAWFGTGHKGGMKSVFLMGCFNPACQKWCTVTKV
HTGHDDKTLERLQDELDMVKISKDASKVPDWLLCTKTMIPDFVARDPEAMPVWEITGAEF
TKHDVHTAHGISIRFPRVTKIRADKDWKTATSLPELEALFKKSKDTADFAIPPGFSNKCD
DNVGSNETSPSKAGTTSKNVSEKSETTVSNKTSYSTHKKKEKPQNKTDGNRSNYGDDDND
ESDNEKKPIVRKRKLDYSSADEDEEPKLKIKKPLPDVFLGVKIPRLQGEIELQDELSRYF
IAYGGSFLRADEADSCTHVVHTDTSASQVSPHGHWPPSARHVTADWLRDSVRLGELQDAS
RYAVRAPAPVGHRSGQVT
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgtccgtgaagagttctgtgcgtgtccgtgaagggttctgtgcgtgtccgtgcgtgcgc
ttggagtcgccacgcattcggttcggagtgcacgaaacaaactttatggcgcctgccttc
ccatcggaccaccaaaagctgtttccaagtcacgtggcgcaactttgcattttactgaag
tatcttgacttctgggctgtagccgcgtccgaggcgaactgtatcaccgacgtttcggtc
ggcatcgcagtcgccatcatcaagctgcgggagatgtccgacgcggaggcgggcggcgag
gaggaaggcgaccagaagaagttcttcgcggagcgcgccaagacggggcgagccgcctgc
aagaagtgcaagcagaagctcgagacgggcaagctgcggctggccaaggccggctacaac
cccttcgggccgggcctcctgaagctgtggcaccacgtggcctgcctcttcgaggtgttc
tcgcgccagcgcaagaccacggcgcggatcgagtcgccggaggacatcgagggctggagc
gacctcgaggacgaggacaaggacgagatactgcacttcttacccgggtgctcccgagac
acgcagtctcccaagaagaggaaagaggaggcgtctggcgatcccaaggccgggtccaag
gcggggaaacaggcctctggggaagggtcccagaaggcgggagcgccgctgaagaacggc
aaaggcggcggcgggggccgcgaccacaaggacaactctttccgcgagttccgcaagctg
tgcatggacgtggagaatgtgagcagctacacggccaagacggccgtcgtcgagaagatg
ttcaccaagggcacggacggcgagagcttcaagggcgacctgctgctgtggtgccgcctg
ctgctgcccggacacgtgaagcgagtatacaacctgcagagcaagcagctcgtcaagctg
ttcagcaggttgtttcgagccgaccaggacgagatgctggaggacttggagaaaggcgac
gtggccgagactgtcagcacttttttcgagaaaagcaaacactgccagccggtgaagaag
agtgcacttactctctacgaggtagatgagtttctggaagaacttgccaaacttaccaaa
gaggatgatcagattgagcacttccaaagaattcttcccagatgtacctctaacgacctg
aagatgatcatcaggctggtgaagcatgatttacgcataaatgctggacctaaacacata
ctggaagctgtacatccagatgcttatcaggcgttccagacgtctcgtgaccttggggcc
gtgctgtccaaagccacgacaaagactgaggcaggagtcagctcgccatccaagaagaaa
aacatcacaatcacagctaaactcatgactccagtgttacctatgttggcggaggcctgc
aagtcggtggagtacgccatgaagaagtgtccgaacggcatgtacgcggaggtgaagtac
gacggcgagcgcgtacagctgcacaagcagggcgcggagtacaagtacttctcgcgcagc
ctcaagcccgtggtcccccacaaggtaaaccatttcaaagacttcatcccaaaagcattc
cctcatgcaaaggacctcatcctagactgtgaagtccttatgattgacacacacaccggc
aaacctctccctttcgggactctaggagttcataagaaaactgctttcaaagatgctaat
gtgtgcttgtttgtctttgactgtatatattacaatggagaagttttattagacaagcct
ataaaagagagaaggaagatacttctggacaatatgattgagatacccaaccatgtcctt
ttttctgaagtagaagaagtacacgaaccaaaggatctggagtctttgataacaaaggtt
ttgaaacaaggactggaaggtttagtcctgaaagatttaatgagcacgtatgaacctggc
aagagacactggctgaaggtgaagaaggactatctgttcgggggagcgatggcggactct
gccgacctggtggtgctcggagcgtggttcggaactggtcacaaaggtgggatgaagtct
gtgtttctgatgggctgcttcaatccagcctgccagaagtggtgtacagtcacaaaagtt
cacacgggccatgatgacaaaaccctggaaagattgcaggatgaattggatatggtcaag
atcagcaaagacgcaagtaaagtacctgactggcttctttgtaccaagacaatgatccca
gactttgtggcaagggacccagaggcgatgccagtgtgggagatcacgggagcggagttc
acgaagcacgacgtacacacggcgcacggcatctccattcgcttccctcgcgtcacgaag
atacgggcggacaaggactggaagaccgctacatctctgcctgagctggaggctctgttc
aaaaagtctaaagacactgctgattttgccatcccacctggatttagtaacaaatgtgat
gacaatgtaggcagcaatgagacatcgcctagcaaagctggtacgacaagtaaaaatgta
tcagaaaaaagcgagacaacggtttccaataaaacttcatattccactcataagaaaaaa
gaaaaaccacaaaacaagactgatggtaacagaagcaattatggtgatgatgataatgat
gaaagtgataatgaaaagaagcctattgtgaggaaaaggaagttagattattcttcagct
gatgaagatgaggaacctaaactgaaaattaagaagcccctgcctgacgtattcctcgga
gtgaagataccacggcttcaaggcgagatagaacttcaggacgagttgtctcgatatttc
attgcctacggcgggtcgttcttgcgcgccgacgaggccgactcgtgcacgcacgtggtg
cacaccgacacgtctgccagccaggtgtccccgcacggtcactggccgccctccgcacgc
cacgtgaccgctgattggctgcgcgactccgtcaggctcggggagctgcaggacgcctcc
agatacgccgtgcgcgcgccggcgccggtcggacacaggtctggacaagtgacatga

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