Bacillus rossius redtenbacheri: 134540160
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Entry
134540160 CDS
T09888
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
bror
Bacillus rossius redtenbacheri
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134540160
Enzymes [BR:
bror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134540160
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
134540160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
zf-C2H2_DHX34
DEAD
OB_NTP_bind
HA2_C
AAA_19
AAA_22
nSTAND3
HA2_N
ATPase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
134540160
NCBI-ProteinID:
XP_063238775
LinkDB
All DBs
Position
16:19264859..19310038
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AA seq
1190 aa
AA seq
DB search
MERFNYDDNYRRNSSSKHSHRRSYHGETSHSSRHSDGTRSSNRETSPIRQARHHTSDNDR
YSKDKDKTFQSSDSSKDGQSFSFLTYRYELSHIWFSDKFCFLDQEDFWKFLRKYEAVKKK
SHGKGNISTTSCGSEGGDNALGLPGAFDKGHLLRVHVASSVDDDYKRLPSRSLSRQQLAE
FRGVLHLYLDFQQREKFAKLKKLRKSQASLPVAQFREEIVSSVQKNRVVVIAGDTGCGKS
TQVPQYLLKAGFNKIVCTQPRRIACISLCKRVAYETLNEYGTDVGFQIRFEKSKTQHTRI
VFVTEGLLLRQVSTDPCLSGYDVVVLDEVHERHLHGDFLLGVVKCLLYQRSDVKVVLMSA
TINIQLFAGYFGDYAAVVQVPGRLYPIKLLYQPVSAEEKSSKSARINPAPYVRIMQLIDE
KYPRAEKGDLLIFLSGMSEISTVVDAARQYAQQNQGWIVLPLHSTLSIAEQDKCFDYSPD
GVRKCVVSTNIAETSITIDGVRFVVDSGKVKEMSYDPVCKMQRLKEFWISRASAEQRKGR
AGRTGPGVCYRMYSEEEYRAMAQYTTPEILRVPLDSLLLQMVAMGLPDARKFPFIESPPA
DSIENAIVTLKHQGALTEDEKLTAMGGMLARLPVDISLGKMLIMGSLFHQVDPILSLAAA
LSVQSPFTNRSYRDPDCETSRKELESDHGDPVTLLNALRGWLEVKHTGGDSRAGGGSRLW
CRRRGLEEQRFYEMVKLRSQFRDLLQDAGLLRSDAVPPEQMSSAERALRHGELQALRALK
RSHRDAAPQRRKTLRPDVWEACMEGDEERDGRAGEVDIKDVEFRLSNDSSQVRSLVSGAT
ACSYKDVMMLKVILCAGLYPQLAVADEFNHSKSVSEQLFHTPGKAYVALHPTGFFGNHPQ
VLQLEESDIVVPDGFGSKLPVSSRHQLLCYMSLLETTKPYLVTTMRMPAAQTLLLFAQSI
DTNVDFSRLVCDSWLQLEFPVPEAAMTLLLKAARLRNKWEQLLKLRLQDSVPSVENKATS
AIATARLERELSEDLPRFMHTEVVYTLKRLLPADLKGLHAGTGRGDGCWPVGPNPFHESW
ELCPHPIKGGVQLASYLTFDCLESRGEEVEYETWRCPKCELVASFSMFEQLQHRHACQDA
QEAEDASKAEEDESTMPRKPNSERFSCEQCNKTYYFTPTEILRHKKQHKQ
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaaagatttaactatgatgataattatagaagaaattcttcatccaaacatagtcac
agaaggagttaccatggtgaaacatcacactcgtctcgtcatagtgatgggaccagatcc
tcaaacagggagacatcacctattcgacaagccaggcatcatacatcagataatgacaga
tactctaaggataaggataaaacatttcagtcttcagattctagtaaagatggacaaagc
ttttcatttttaacgtatcgttatgaactcagtcatatttggtttagtgacaaattctgc
tttttagatcaagaagacttttggaagtttttacgaaaatatgaagctgttaaaaagaaa
tcgcatggtaaaggcaatattagcaccacttcgtgtggctcagaagggggcgacaacgcc
ctggggctcccgggggccttcgacaagggccacctcctgcgagtgcatgtggcatccagc
gtcgacgacgactacaagcgcctgccgtcccggtcgctgtcccggcagcagctggccgag
ttccgcggcgtcctgcacctctacctcgacttccagcagcgggagaagttcgccaagctc
aagaagctccgcaagagccaggccagccttcccgtcgcccagttcagggaggagatagtg
tcgtcagtgcagaagaatcgtgtggtggtcatcgccggagacaccggctgtgggaagtcc
actcaggttccgcagtacttgctgaaagccggcttcaacaagatagtttgcacgcagccg
cgaaggatagcttgtatttccttgtgcaagcgcgtggcctacgagacgctgaacgagtac
ggaacagacgtcgggttccagatacgcttcgagaagagcaagacgcagcacaccaggatc
gtattcgtgacggaaggtttgctgctgcgacaggtgtcgacggacccttgcctgtcgggc
tacgacgtggtggtgctggacgaggtccacgagcgccacctgcacggggacttcctgctg
ggggtggtcaagtgcctgctgtaccagcgctccgacgtcaaggtggtgctcatgtccgcc
accatcaacatccagctcttcgccggctacttcggggactacgccgccgtcgtccaggtg
ccaggccgactttaccccatcaagctgctgtaccagcccgtgtcggcggaagagaagtca
tccaagtcagcgaggatcaacccggcaccgtacgtgcggatcatgcagctcatagacgag
aagtatccgagagcggagaagggcgacctgctgatcttcctgagcggcatgagcgagatc
tcgacggtggtggacgctgcgaggcagtacgcgcagcagaaccagggctggatcgtcctg
cccctgcacagcacgctctccatcgccgagcaggacaagtgtttcgactactcccctgac
ggcgtgcggaagtgcgtggtctcgaccaacattgcggagacctccatcacgatcgacggc
gtgcggtttgtggtggactctgggaaggtgaaggagatgagctacgaccccgtgtgcaag
atgcagcggctcaaggagttctggatcagccgagcgagcgccgaacagaggaagggtcgg
gcgggacgcacgggaccgggagtttgctaccggatgtactcggaggaggagtaccgggcc
atggcccagtacacgacgccggagatactgagggtgccgctcgactcgctgctgctgcag
atggtcgccatggggctgcccgacgcgaggaagttccccttcatcgagtccccgcccgcg
gacagcatcgagaacgcgatcgtcaccctcaagcaccagggagcgctgacggaggacgag
aagctgactgcgatgggcggcatgctggcgcggctgcccgtcgacatcagcctgggcaag
atgctcatcatgggctccttgttccaccaggtggaccccatcctgtcgctggcggccgcg
ctcagcgtccagagcccgttcaccaaccggtcctaccgcgaccccgactgcgagacgtcc
aggaaggagctggagtcggaccacggggaccccgtgacgctgctgaacgcgctgcgcggc
tggctggaggtgaagcacacggggggggactcccgcgcgggaggcggctcgcggctctgg
tgccgtcggcgcggcctcgaggagcagcgcttctacgagatggtgaagctgcgctcgcag
ttccgggacctgctgcaggacgcgggcctgctgaggagcgacgcggtgcccccggagcag
atgagcagcgcggagcgcgcccttcggcacggcgagctgcaggcgctgcgcgccctgaag
cgctcgcaccgggacgccgccccgcagcgcaggaagaccctaaggccggacgtgtgggag
gcttgcatggagggcgacgaggagcgcgacgggcgcgccggcgaggtcgacatcaaggac
gtggagttccgcctcagcaacgacagctcccaagtcaggagcctggtgtccggtgcgacg
gcctgcagctacaaggacgtcatgatgctgaaggtgatcctgtgtgccgggctgtaccct
cagctggcggtggccgatgagttcaaccactccaagtcggtgtcggagcagctgttccac
acgccgggcaaggcgtacgtggccctccacccgaccgggttcttcggcaaccacccgcag
gtgctgcagctggaggagtcggacatcgtcgtgccggacggcttcggctccaagctgccc
gtcagctcgcgccaccagctgctgtgctacatgtccttgttggagacgacgaaaccctac
ttggtgaccacgatgcggatgccggccgcccagacgctcttgctgtttgcccagagcatt
gacaccaacgtggacttctctcggctcgtatgcgactcgtggctgcagctggagttcccg
gtgccagaggcagccatgaccttgctcctgaaggccgccaggctgcgcaacaagtgggag
cagctcctcaagctacgcctgcaagactcggtgcccagcgtggagaacaaagcgacgagc
gcgatcgcgacggcgaggctggagcgggagctgtccgaggacctgccccggttcatgcac
acggaggtggtgtacaccttgaagcggctgctgcccgccgacctgaaggggctccacgcg
gggaccgggcggggagacggctgctggcccgtcggccccaaccccttccacgagtcctgg
gagctgtgcccgcacccgatcaagggcggcgtccagctcgccagctacctcaccttcgac
tgcctggagagcagaggggaggaagtggagtacgaaacttggcgttgtccgaagtgcgag
ctggtggcgagcttcagcatgttcgagcagctccagcacaggcacgcctgccaggacgca
caagaagcagaggacgcatcaaaggcagaagaagatgaaagcacaatgcctcggaaacca
aactcggaacgattcagctgcgaacaatgcaacaaaacgtattacttcacacccacagaa
atattgagacataagaagcaacacaaacaatga
DBGET
integrated database retrieval system
