Bacillus rossius redtenbacheri: 134540221
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Entry
134540221 CDS
T09888
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134540221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bror03041
]
134540221
03009 Ribosome biogenesis [BR:
bror03009
]
134540221
Enzymes [BR:
bror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134540221
Spliceosome [BR:
bror03041
]
Complex A
U1 snRNP components
U1 related factors
134540221
Complex B
134540221
Ribosome biogenesis [BR:
bror03009
]
Eukaryotic type
Pre-60S particles
Helicases
134540221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134540221
NCBI-ProteinID:
XP_063238905
LinkDB
All DBs
Position
1:94002894..94169289
Genome browser
AA seq
1182 aa
AA seq
DB search
MFRDRSRNRDRGRRGGGGGFGDDRGGGLGMGGGLKGKQPGERLRRPRWDMSTLQPFRKDF
YVPHPNVLHRPMEEVIRYRASKEITVSGRDVPNPNLSFEEGNFPDYVMNEIRRQGFVEPT
AIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQPRLTRGDGPVALVLAPTRE
LAQQIQQVANDFGEETQVRNTCVFGGAPKGPQARDLERGVEICIATPGRLIDFLERSTTN
LRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRNLAEEFLTDYI
QINIGSLQLAANHNILQIVDVCQEYEKESKLMQLLSEIASEKENKTIIFVETKRKVDQIT
RSIGRYGWPAKSIHGDKSQQERDFVLAEFRNGKAAILVATDVAARGLDVEDVKFVINFDY
PSSSEDYVHRIGRTGRSQKTGTAYAFFTPSNAKQANDLISVLQEANQVVNPKLHEMADMA
RSGGFGRSRNRWSRPSNDRGGRAGDRDRETPRGGDRDSRGATGDKGLSRGGRNDRDRNDR
SGERDRGRERERSTRRPSRFSDAGPQQNDESDSGGLPPPLLNQPPMLPQTALLGSGPATQ
NSLLGNAPGAQNSLLGGAATGYQMNQPPPLLGNKVQNPNEPIDNRGPSGGLMDVDNRRSG
GLMDMRGPPGGLLDSGNPAVDKGGLMDARGNMGNRGGGMDNRRGGMLDNRGPGGMIDNRG
FGMDNRGPGGMMDHRGPGGMMDNRGPGGMMDNRGPGGMMDNRGSGGMMDNRGPGGMMDNR
GPGGMMDNRGPGGMMENRGAGGLLNRGPGGMMDNRGPGGMMDSRGTGGMMDNRGPGGMMD
NRGPGGLLDNRGAGGMMDNRGPGGMMDNRGPGGLLDHRGGGGLLDNRGPGGLLDNRGPGG
LLDNRGPGGLLDNRGPGGIMDNRGPGGLLNNRGPGGMMDNRGPGGMLDNRGPGGMMDNRG
PGGMMGNRGQGGLMDNRGQGGLMDNRGQGGLMDNRGQGGMIDNRGQGGMMDMRGQGGLMD
GRGQGGMMDGRGQSGMMDGRGQGGMMDGRGQGGMMDGRGQSGMMGNRGQGGILDRRSGGM
MDRDGRGSSGRIMDRDGRAPSGGLMGNAPPNYGQGSREGPTPLLGSKLAPPPFFQGGGNP
NVSSNPDLANSAALGGFTSLSQLQQVMNGFPFGQPPPPPPSN
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcgaccgcagcaggaacagggatcgaggacggcggggtggcggtggaggcttc
ggtgacgaccggggcggcggcctgggtatgggcggcggactgaagggcaagcagcctggc
gagaggctgcgccggccgcgctgggacatgagcaccctgcagcccttccgcaaggacttc
tacgtaccgcaccccaacgtgcttcacaggcctatggaggaagtcattcggtaccgagcc
agcaaggaaataactgtgagtggacgtgacgtgcctaacccgaatctcagctttgaggaa
gggaacttcccggactacgtgatgaatgagatcaggaggcaaggcttcgttgagcccaca
gctattcaagcgcagggctggccaattgcactgagtggtcgtgacatggttggaatagcc
cagacagggtctggaaagacgcttgcttacatcctgccagcgatcgtccacataaaccac
cagccgcgcctgactcggggcgacggtccagtcgccctggtgctcgcaccgacccgggag
ttggcccagcagatacagcaggtcgccaatgactttggggaggagacacaagtgcgaaac
acttgcgtttttggtggtgcacccaagggcccgcaggctagggacctggagaggggagtg
gagatctgcatcgccacgccgggccgcctgatagacttcctggagcggagcaccaccaac
ctgcgtcgctgcacctacctggtgctggacgaggccgaccgcatgctggacatgggcttc
gagccccagatacgcaagatcatagagcagatcaggccggacagacaggtgttaatgtgg
tcggcgacgtggccgaaggaagtacgcaacctggcggaggagttcctcaccgactacatc
cagatcaacattggctcgctgcagctggcggccaaccacaacattctgcagatagttgac
gtgtgccaggagtatgagaaagagagcaagctaatgcagttgctgtccgaaattgcttcg
gagaaggagaacaaaaccataatttttgttgaaaccaaaagaaaggtggatcagataaca
agaagcattggaagatatggatggccagcgaaaagcatacatggtgacaaatctcaacag
gaacgtgattttgttttagcagagttccggaatgggaaagcagccattctggtagcaacc
gacgttgctgcgcgggggctggatgttgaagatgttaagtttgtgatcaactttgactac
ccatcctcatccgaagactacgttcatcgtattggtcgtactggtcgctctcaaaaaact
ggcactgcttatgccttcttcacacccagcaatgccaagcaggcaaacgaccttatctca
gttttgcaagaagccaatcaggttgtgaaccctaagttacacgagatggccgacatggct
cgctcgggaggctttggccgcagtcgaaatcgatggagcagaccaagtaatgaccgaggc
ggccgtgcaggagacagagacagggagacacctcgtggtggagacagggacagcagggga
gccactggggataaaggtctttccagaggtggcagaaatgatagagacagaaatgatcgc
agcggggagcgtgatcgtggacgtgagcgagaacgcagcacccgtagaccatcacgtttt
tcagatgctggaccccaacagaatgatgagagtgattcagggggcttacctcctccactg
ttaaaccaaccacccatgttgccgcagacagctctcttgggcagcgggcctgcaacccag
aattccctgttgggtaatgcccccggagcccagaattcattgttgggcggtgccgctact
ggataccagatgaaccagccaccacccttgcttggcaacaaggtgcaaaaccctaatgag
ccaatagacaacagaggcccctctggtggcttgatggatgtggataacaggcggtctggt
ggcttgatggacatgagaggtcctcctggtggcctattagatagtggaaatccagcagtt
gataaaggtgggctaatggatgcaagaggaaatatgggaaacaggggtggtggcatggac
aacaggagaggtggaatgttggacaatagaggacctggaggaatgatagacaacagaggc
tttggcatggacaatagaggaccaggtggtatgatggaccacagaggacctggtggtatg
atggacaacagaggacctggtggtatgatggacaacagaggacctggtggtatgatggac
aacagagggtctggtggtatgatggacaacagaggacctggtggtatgatggacaacaga
ggacctggtggtatgatggacaacagaggacctggtggtatgatggaaaacagaggagct
ggaggtttgttgaacagaggacctggtggtatgatggacaacagaggacctggaggtatg
atggacagcagaggaactggaggtatgatggacaacagaggacctggaggtatgatggac
aacagaggacctggaggtttgttggacaacagaggagctggtggtatgatggacaacaga
ggacctggtgggatgatggacaacagaggacctggaggtttgttggatcacagaggtggt
ggaggtttgttggacaacagaggacctggaggtttgttggacaacagaggacctggtggt
ttgttggacaacagaggacctggtggtttgttggacaacagaggacctggtggtataatg
gataacagaggacctggaggtttgttgaacaacagaggacctggtggtatgatggacaac
agaggacctggaggcatgttggacaacagaggacctggtggtatgatggacaacagagga
cctggaggtatgatggggaacaggggtcaaggtggtttgatggataacagaggtcaaggt
ggtttgatggataacagaggtcaaggtggtttgatggataacagaggtcaaggtggaatg
atagataacagaggtcaaggtggaatgatggatatgagaggtcagggtggcttgatggat
ggaagaggccagggtggtatgatggatggtaggggtcagagtggcatgatggatggaaga
ggccagggtggaatgatggatggaagaggccagggtggtatgatggatggtaggggccag
agtggcatgatgggaaacagaggtcaaggtggtattttggatagaagatcaggaggcatg
atggatagagatggaagagggtcatctggaaggattatggatagagatggaagggcacct
tctggtggtcttatgggtaatgcaccacccaattatggacaaggtagtagagaaggtcct
actcctctgcttggcagcaaactcgcaccgcctccattcttccaaggtggaggtaatcca
aacgttagcagtaacccagatctagccaacagtgcggctcttggtggcttcacttcactg
agtcaactccagcaagtcatgaatggttttcccttcggccagccacccccaccacctcca
agcaactga
DBGET
integrated database retrieval system
