KEGG   Bacillus rossius redtenbacheri: 134540334
Entry
134540334         CDS       T09888                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
bror  Bacillus rossius redtenbacheri
Pathway
bror03013  Nucleocytoplasmic transport
bror03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bror00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134540334
  09122 Translation
   03013 Nucleocytoplasmic transport
    134540334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bror03019]
    134540334
   03041 Spliceosome [BR:bror03041]
    134540334
Messenger RNA biogenesis [BR:bror03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     134540334
Spliceosome [BR:bror03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    134540334
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR3_2nd WD40 Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I Beta-prop_NOL10_N NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR36-Utp21_1st WD40_Gbeta DSE1_N Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_ACSF4 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_CAF1B_HIR1 WDR54 Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 134540334
NCBI-ProteinID: XP_063239066
LinkDB
Position
16
AA seq 336 aa
MVEKLLYNTVLAQTFSACGNYLIASNTYGEIATFDLQKMVSPGEGLGPPCREAEYHFSPR
GDAEVCSLATTDRFLVAGLAGEITGWDWKTVTSGTSPKQSWSIQIATAKDAVDKPDVNCM
AYSRDDNLLYAGCGDSKIHVFSLEDGRLVRTLSGHEDYVHCVDKFRGQLASAGEDGCVKL
WDTRQKECVASLQPHLKEKVARPELGKWVGAVALSEDWMVCGGGPRLSLWHLRSMDVMTA
FPLDDAGVHVAAFQDDRILVGGTMPHFYHLNYSGAVYAQVPSSSTTVYSVVYQESPVKVM
CLAGSSSKIDVCTNFTYRDQIISFAPKIKSSFPANY
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggttgagaagttgttgtacaacactgttcttgcacaaacattttctgcttgtggaaac
tatctgattgcgtcaaatacgtatggagagatagcaacatttgacctgcagaagatggtg
agccccggggaagggctgggcccgccctgccgggaggcggagtaccacttctctccgagg
ggcgacgcggaggtgtgcagcctggcgaccacggaccgcttcctggtggcggggctggcc
ggcgagatcaccggctgggactggaagaccgtcacctcgggcaccagccccaagcagagc
tggagcatccagatcgcaaccgcaaaggacgcggtggacaagcccgacgtgaactgcatg
gcgtacagcagggacgacaacctgctgtacgcgggatgcggcgacagcaagatccacgtg
ttcagcctggaggatggcaggctggttcgcaccctgtccggtcacgaggactacgtccac
tgcgtcgacaagttcaggggccagctggcgtcggccggcgaggacggctgcgtgaagctg
tgggacacgcggcagaaggagtgcgtggcctcgctgcagccgcacctcaaggagaaggtg
gcgcggcctgagctcggcaagtgggtcggcgccgtcgccctcagcgaggactggatggtg
tgcggcgggggcccgcgtctctcgctctggcacctgcgctccatggacgtgatgacggcc
ttcccgctggacgacgccggcgtccacgtggccgccttccaggacgaccgcatcttggtg
ggcgggaccatgccccacttctaccacctcaactactcgggcgcggtgtacgcccaggtg
cccagctcgtccaccaccgtctactcggtcgtgtaccaggagtcccctgtcaaggttatg
tgccttgctggttccagtagcaagatcgatgtctgcacaaacttcacttacagagatcag
atcatatcgtttgctcccaaaatcaagtccagctttccagctaattactag

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