Bacillus rossius redtenbacheri: 134540481
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Entry
134540481 CDS
T09888
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134540481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bror03021
]
134540481
03019 Messenger RNA biogenesis [BR:
bror03019
]
134540481
Transcription machinery [BR:
bror03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
134540481
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134540481
U7-dependent histone pre-mRNA processing factors
134540481
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
DUF4457
Motif
Other DBs
NCBI-GeneID:
134540481
NCBI-ProteinID:
XP_063239333
LinkDB
All DBs
Position
16
Genome browser
AA seq
688 aa
AA seq
DB search
MSTKRKSDSQVPAEESDLLLIRPLGAGQEVGRSCIMIEFKGKKIMLDCGIHPGLSGMDAL
PFVDLVEADEIDLLLISHFHLDHCGALPWFLQRTSFKGRCFMTHATKAIYRWLLSDYIKV
SNISTEQMLYTEADLETSMDKIETINFHEEKDVCGIKFWAYNAGHVLGAAMFMIEIAGVK
ILYTGDFSRQEDRHLMAAEIPNVRPDVLITESTYGTHIHEKREEREARFTTLVHDIVNRG
GRCLIPVFALGRAQELLLILDEYWSLHPELYDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RRQIAINNPFVFKHISNLKGIDHFDDIGPCVVMASPGMMQSGLSRELFETWCTDAKNGVI
IAGYCVEGTLAKAVLSEPEEIATASGQKLPLKMSVDYISFSAHTDYQQTSEFVRQLKPPH
VVLVHGEQNEMGRLKAALQREYEDDPDTRMEVHNPRNTAAVELYFRGEKTAKVMGALAVD
RPRPGHRLSGVLVRRNFNYHMLAPCDLSKYTDMSMSQVVQRQSVHYSGTLQILKYMLTLV
AGPLEPAEERKFRAFQCIDVSVEGKVVTLEWVATPVNDMFADAVLAAVLQAEIIDSPPSF
FPVQSKMDRMHFKECLIEMLQEIFGEDSVPKIFKGEKLYVTVDGKKANIDLLNLDVTCEE
DETFQQIVQTAVTKLYQSLSPPRTEAIL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaaaagaaaaagtgattcacaagttccggctgaagaaagtgacctattactc
attcgtccgttgggcgctggacaggaagttggacgctcatgcatcatgatagaatttaaa
gggaagaagatcatgctggactgcgggatccacccgggcctctccggcatggatgctctg
ccattcgtggatctggtggaagcggacgagatcgacttgcttcttatctctcatttccac
ttggaccactgcggtgctctgccctggttcctccagaggaccagcttcaagggtcgatgc
ttcatgacgcacgcaacgaaggccatctacaggtggctgctctcggactacatcaaagtc
agcaatatatccacagagcagatgctgtacacggaagctgatctggagacgagcatggac
aagatcgagacgataaacttccacgaagagaaggacgtgtgcggcatcaagttctgggcg
tacaacgccggccacgtcctgggagctgcgatgttcatgatcgagatcgcaggtgtcaag
atcttgtacaccggtgacttctcccggcaagaagacagacatctcatggctgcggaaata
cccaacgtacgtccggacgtcttgatcactgagtcgacgtacggcacgcacatccacgag
aagcgcgaggagcgggaggcgcggttcaccacgctggtgcacgacatagtgaaccgcggg
ggccgctgcctcatccccgtcttcgccctgggacgagctcaggagctgctgctcatcctg
gatgaatattggagcttgcatccagaactgtacgatatccccatctattatgcatcgtcc
ttggcaaaaaaatgcatggctgtttatcagacatacgtcaatgccatgaatgataaaatc
aggaggcagattgctattaacaacccttttgtgttcaagcatatttccaacttgaaaggc
atcgaccacttcgacgacatcgggccgtgcgtggtgatggcgtcgccgggcatgatgcag
agcgggctgtcgcgcgagctgttcgagacgtggtgcacggacgccaagaacggcgtgatc
atcgcgggctactgcgtggagggcacgctggccaaggcggtgctgtcggagccggaggag
atcgccacggcgtcgggccagaagctgccgctcaagatgtccgtggactacatctcgttc
tcggcgcacacggactaccagcagacgagcgagttcgtgcgccagctcaagccgccccac
gtggtgctggtgcacggggagcagaacgagatgggccggctcaaggccgcgctgcagcgg
gagtacgaggacgaccccgacacgcgcatggaggtgcacaacccgcgcaacacggccgcc
gtcgagctgtacttccgcggggagaagacggccaaggtgatgggggcgctcgcggtggac
cggccccgcccgggccaccggctgtcgggcgtgctcgtcaggcgcaacttcaactaccac
atgctggccccctgcgacctctccaagtacacagacatgagcatgagccaggtggtgcag
cgccagagcgtgcactactcgggcacgctgcagatcctcaagtacatgctgaccctggtg
gccggccccctggagcccgcggaggagcgcaagttccgcgcgttccagtgcatagacgtc
tccgtcgaggggaaggtcgtcacgctcgagtgggtggcgacacctgtcaacgacatgttc
gcggacgctgttctcgctgcggtcttgcaagctgagataatagactccccgccgtcgttc
ttccccgtgcagtcgaagatggacagaatgcatttcaaggaatgcctgattgaaatgttg
caagaaatttttggtgaagattccgttccaaagatcttcaaaggggaaaaactgtacgtt
acagtggacggcaaaaaagcaaacattgaccttttgaatctggacgtgacgtgtgaagaa
gacgagacgttccagcagattgttcagactgccgtcacaaagttgtatcagtcgctgtcc
ccgcctcgaactgaagccatactatga
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