Bacillus rossius redtenbacheri: 134540737
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Entry
134540737 CDS
T09888
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
134540737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bror03400
]
134540737
DNA repair and recombination proteins [BR:
bror03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
134540737
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
134540737
NCBI-ProteinID:
XP_063239704
LinkDB
All DBs
Position
17
Genome browser
AA seq
1273 aa
AA seq
DB search
MAQKTLFSFFSKSPSVNKSSNPKEGDGSPGIRKRERSPGKSDEDRKTPKKINNGPRVNDV
VWARLDGHPWWPGLVTNDPKGGPFVRAGEVHVQFFDRPPSRAWVRRRAVEAFRSGDDKPC
PKKDAEKWRASCREAVSALRLPLADRNELVVDFARIEREEPAGTAVSADEGEGDVDKENV
SADPETPVSKKRKVLAYDSEDSGDEYKPKKEEMEVDSDSASSGVPSETLSDPEMSDVEES
PVKEKRSKASAGCAPARKSAGGAGGISPSAARVSQGTKAKLALFPSTEAQGGGQASETRG
QAPGEDSWAHLKLDFLKPDRIRDARRRPPSHPEYDPKTLYVPEDFMRNQTPAIRQWWEMK
SKHFDCVLFFKVGKFYELYHMDAVTGVNELGLMFMKGDKAHSGFPEVAYGRFSSSLIEKG
YKVARVEQTETPDMVAERCRSASKTTKFDKVVKREICQIGSRGTKVYNVIDGESKQPESS
YLLALTEKAGADKSTFGVCFVDTSIGLFHLGQFDDDRHCSRLRTLLAHQPPVQVLYERGA
LSERTQRLLRTALASVLKEALAPESEFWTAGRTLVTLAEGGYFASGGVHSWPEGLKEFLS
ESSSLGLSARDDAELAVRALGAVTWCLTRGHLDQQVLAMGRFRRYTPADQEPPAAPDAAA
FPRHMILDGVTLHNLNVLENRDGGRDGTLLGRMDLCCTPFGKRLLHRWVCSPLCSVDSIR
ARQAAVGQLLDRPAVLQEARGLVSQLPDLERLLTRIHGQGNAERSKTHPDSRAIFFEDNL
YSKKKIQDFNAVLSGFKCAERVAEMFQDRELDVTAELLVQCTRSAPEGSFPDMTESLHFF
ETAFDQEEATKHGRIIPRAGVDPEYDSVTQELQEIQSELDRYLQEQRSFFGCKVVYHGTD
KKRFQLEVTDTAAKKAGRGYELQSQRKGFKRFTTERTKDLLARQISAEDQKKAVLKDLSR
RIFSQFSAKYAEWSAAIQCLSVLDVLMAFAEYCLTEPDTCVPEFVQPSADVQPHVKVVEG
KHPCLCSSDGFIPNDTALGCDGAASVVLVTGPNMGGKSTLMRQLGLLVVMAHMGCRVPAA
GMRLTPVDRVFTRLGANDDLMAGESTFLVELSETSCILRCASPHSLVLVDELGRGTSTYD
GTAIAAAVVDRLVRRSCRTLFSTHYHGLVEDYKGNPLVTLGHMACMVENESEDPSEETVT
FLYKFAGGACPKSYGFNAARLAGVPAGVVRRGREKAERLERHGLERRLFQDLCRPAASAP
ELCAALRRLCSLA
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaactttgttcagtttcttttcaaaatcaccttctgtcaacaaaagttct
aaccctaaagaaggcgatggctctccaggtattcggaaaagggaaaggagtccaggaaaa
tcggacgaagataggaaaacgccaaagaaaattaacaatgggccgcgagtgaacgacgtg
gtgtgggccaggctggacggccacccctggtggccgggcctcgtcaccaacgaccccaag
ggcggccccttcgtgcgggcgggcgaggtgcacgtgcagttcttcgaccggccgccctcc
agggcctgggtccgcaggcgggcggtggaggcgttccggagcggcgacgacaagccgtgc
cccaagaaggacgcggagaagtggcgggcgtcgtgccgcgaggcggtctccgcgctgcga
ctgccgctcgcagacaggaacgagctggtggtcgacttcgctcgcatcgagcgggaggag
ccagccggcacggccgtctcggcggacgaaggcgagggagacgtcgacaaggagaacgtg
agcgccgacccagagacgcccgtctccaagaagcgcaaggttctcgcctacgacagcgag
gactccggggacgagtacaaaccgaaaaaagaagaaatggaggtggattcggattcggcg
agttccggggtgccgtcagaaaccttgtccgatccggaaatgtccgatgttgaagaatct
ccagttaaggagaagaggtcgaaggccagcgccgggtgcgcgcccgcgcggaagagcgcg
ggcggggcgggcggcatctctccctcggccgcgcgcgtcagccagggcaccaaggccaag
ctggccctcttcccctcgaccgaggcgcagggaggcgggcaggcgtcggagacgaggggg
caggcccccggcgaggacagctgggcgcacctcaagctggacttcctgaagccggacagg
atccgggacgccaggcgacgcccgccctcccacccggagtacgaccccaagactctgtac
gtgccggaggacttcatgcgcaaccagaccccggccattcggcagtggtgggagatgaag
tccaagcacttcgactgcgtcctgttcttcaaagttggcaagttctacgaactgtaccac
atggacgcagttacaggcgttaatgagttgggcctgatgtttatgaagggagacaaggcg
cactcggggttcccggaggtggcgtacggccggttctcgtccagcctcatcgagaagggc
tacaaggtggcgcgcgtcgagcagacggagacgcccgacatggtggccgagcgctgcagg
agcgcttcgaagaccaccaagttcgacaaggtggtgaagcgagagatctgccagataggc
tcacggggcaccaaggtctacaacgtgatcgacggagagtcgaagcagccggagtccagc
tacctgctggcgctcaccgagaaggctggtgcggacaagtccactttcggcgtgtgcttc
gtggacacgtccataggcctgttccacctgggccagttcgacgacgatcgccactgctcg
cggcttcgcacgctgctggcccaccagccgcccgtgcaggtgctgtacgagcgcggcgcg
ctgtcggagaggacccagcggctgctgcgcacggcgctggccagcgtgctgaaggaggcg
ctcgccccggagtcggagttctggacggccggcaggacgctcgtcacgctggcggagggc
gggtacttcgcgtcgggcggcgtccacagctggcccgagggcctcaaggagttcctcagc
gagagcagctcgctggggctgtcggcgcgggacgacgcggagctggcggtgagggcgctg
ggggcggtcacctggtgcctgacgcgcggccacctggaccagcaggtgctggccatgggt
cgcttccggcgctacacgcccgccgaccaggagccgccggctgcgcccgacgctgccgcc
ttcccccgccacatgatcctggacggcgtgacgctccacaacctgaacgtgctggagaac
cgcgacggaggcagggacggcacgctgctcgggaggatggacctgtgctgcacgcccttc
ggcaagaggctgctgcaccggtgggtgtgcagcccgctgtgctccgtggacagcatccgt
gcgcgccaggcggccgtgggccagctgctggaccggccggccgtgctgcaggaggcgcgg
ggcctggtgtcccagctgcctgacctggagcgcctgctcaccaggattcacggccagggc
aacgctgagagatccaagactcatccggacagccgagccatcttcttcgaagacaacctt
tactccaagaagaagatacaagacttcaacgcagtcctgtcgggtttcaagtgcgcggag
agggtagcggaaatgttccaagaccgggagctggacgtcacggctgaactgctggtgcag
tgcacgcgctccgccccggagggcagctttcccgacatgacagagtccctgcacttcttc
gagactgcgtttgaccaggaggaagccacgaagcacggccgcataatcccgagagctggc
gtcgacccggagtacgactccgtgacgcaggagctgcaggagatacagtccgagctcgac
agatacctgcaggagcaacgcagcttcttcgggtgcaaggtggtgtaccacggcacggac
aagaagaggttccagctggaggtgacggacacggcggccaagaaggccggccgcggctac
gagctgcagtcccagaggaaaggcttcaagaggttcaccacggagagaaccaaggacctt
ctggctcgacagatttctgctgaagaccagaagaaggcagtgctgaaagatctcagtcgc
agaattttctctcagtttagtgcaaagtacgcggagtggagcgccgcgatacagtgcctg
tccgtgcttgacgtgctcatggccttcgcggagtactgcctcacggagcccgacacgtgc
gtgccagagttcgtgcagccatctgcagacgtgcagccgcacgtgaaggtcgtggagggg
aagcacccgtgcctctgctcctcggacggcttcatccccaacgacacggcgctgggctgc
gacggcgcggcctccgtggtgctggtgacgggccccaacatgggcggcaagtccacgctc
atgcggcagctgggcctgctggtcgtcatggcgcacatgggctgcagggtgccggcggcc
ggcatgcggctgaccccggtggaccgggtgttcacgcgcctgggggccaacgacgacctg
atggccggggagagcaccttcctggtggagctgagcgagacctcgtgcatcctgcgctgc
gcctcgccgcactccctggtgctggtggacgagctggggcgcggcacgtcgacctacgac
ggcacggccatcgcggcggccgtggtggaccggctggtgaggcggagctgccgcaccttg
ttctccacgcactaccacggcctggtggaggactacaagggcaatccgctcgtcaccctg
ggccacatggcgtgcatggtggagaacgagagcgaggacccgtcggaggagacggtgacg
ttcctgtacaagttcgcgggcggggcgtgccccaagtcgtacggcttcaacgcggcgcgg
ctggcgggcgtgccggcaggcgtggtgaggcgtgggcgcgagaaggccgagcgcttggag
cggcacggcctggaacgacgcctgttccaggatctgtgccggccggcggcgtccgcgccc
gaactctgcgccgccctgcgccggctgtgctccctggcgtga
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