Bacillus rossius redtenbacheri: 134540870
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Entry
134540870 CDS
T09888
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03020
RNA polymerase
bror03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134540870
09124 Replication and repair
03420 Nucleotide excision repair
134540870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bror03021
]
134540870
03400 DNA repair and recombination proteins [BR:
bror03400
]
134540870
Enzymes [BR:
bror01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134540870
Transcription machinery [BR:
bror03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
134540870
DNA repair and recombination proteins [BR:
bror03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
134540870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
134540870
NCBI-ProteinID:
XP_063239961
LinkDB
All DBs
Position
17:25986584..26028471
Genome browser
AA seq
1175 aa
AA seq
DB search
MYELEEDQFEEDDGEEISNELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPQIDLQAEAQHTSGEIENPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIRDGEEPIESQHQKTFIGKIPIMLRSTYCLLNGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRIIAIMPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDQEMMEM
VKPSLDEAFVIQEQNVALNFIGARGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKTLMKEVRMYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMTTLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGKLLLKKRHIDMLKDKEYNNYGWQVLVASG
VVEYIDTLEEETVMIAMMTEDMKHEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNYHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSV
VAILCYTGYNQEDSVIMNASAVERGFFRSVFFRSYKDAESKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIISPGIRVSGDDVVIGKTITLPDNEDELEGTTKRFTKRDASTFLRNS
ETGIVDQVMLTLNAEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECLQGKVSSNKGEIGDATPFNDAVNVQKISALLQEYG
YQLRGNEVMYNGHTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMAMNIAPRLMVL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaattagaagaagaccagttcgaggaggacgacggggaggagatctcgaacgag
ctgtggcaggaggcgtgctggatcgtcatcaacgcctacttcgacgagaagggcctggtg
cggcagcagctggactccttcgacgagttcatccagatgtcggtgcagcgcatcgtcgag
gactccccgcagatcgacctgcaggcggaggcccagcacacctcgggcgagatcgagaac
cccccccgctacctgctgaagttcgagcagatctacctgtcgaagccgacccactgggag
aaggacggcgccccgtcgcccatgatgcccaacgaggctcgcctgcgcaacctcacgtac
tccgcgccgctgtacgtcgacatcaccaagaccatcatcagggacggcgaggaacccatc
gagtcacagcatcagaaaaccttcataggcaagatccccatcatgttgcggtccacgtat
tgcctgctgaacggcctgacggaccgagatctcacggagttgaacgagtgtccgttggac
ccgggagggtacttcataatcaacggctcggagaaggtgctgatcgcgcaggagaagatg
gccacaaacaccgtgtacgtgttcagcatgaaggacggcaagtacgcctacaaggcggag
atccgctcctgcctggagcactcttcgcgccccacctccaccctctgggtcaacatgatg
gcgaggggcggccagagcatcaagaagtctgcaattggccagcgcatcatcgctatcatg
ccctacatcaagcaggagatcccgatcatgattgtgttccgcgcacttggctttgtggcc
gacagagacatccttgagcacataatttacgattttgacgaccaagaaatgatggaaatg
gtgaagccgtctctcgacgaagcgtttgtgatccaagagcagaatgtggcactcaacttc
attggtgcgagaggagcgcgacccggggttacgaaggagaagaggataaaatacgcgagg
gaaatcctgcagaaggagatgttgcctcacgtcggcgtgtctgatttctgcgagacgaag
aaggcgtacttccttgggtacatggtgcaccgtctcttgctggcgtccctgggtcgccgg
gagctggacgacagggatcactacggcaacaagcgcctggatctcgccgggcccttgctg
gcgttcctcttcagagggctgttcaagacgctgatgaaggaggtgcgcatgtacgcccag
aagttcatcgaccgcggcaaggacttcaacctggagctggccatcaagaccaagatcatc
acggacgggctgcgctactcgctggccacgggcaactggggcgaccagaagaaggcccac
caggcgagggccggcgtgtcccaggtgctgaaccgcctgacgttcgcctcgacgctgtcc
cacctgcggcgggtgaactcccccatcgggcgcgacggcaagctggccaagccgcggcag
ctgcacaacactctgtgggggatgatctgccccgcggagacgcccgagggggcggccgtc
ggcctggtgaagaacctcgcgctcatggcctacatctcggtgggctcacagccctccccc
atcctggagttcctggaggagtggagcatggagaacctggaggagatcgccccgtccgcc
atcgccgacgccaccaagatattcgtcaacggctgctgggtgggcatccaccgggacccg
gagcagctgatgacgaccctgcgcaagctgcgtcggcagatggacatcatcgtgagcgag
gtgtcgatgatacgggacatcagggaccgggagatacgcatctacacggacgcggggcgc
atctgccgcccgctgctcatcgtcgagaacggcaagctgctgctgaagaagaggcacata
gacatgctcaaggacaaggagtacaacaactatggttggcaggtgctggtggcgagcggc
gtggtggagtacatcgacacgctggaggaggagacggtgatgatcgccatgatgacggag
gacatgaagcacgagaaggagtacgcctactgcaccacgtacacccactgcgagatccac
cccgcgatgatcctgggggtgtgcgcgtccatcatccccttcccggaccacaaccagagc
cccaggaacacctaccagagcgccatgggcaagcaggcgatgggcgtgtacatcaccaac
taccacgtgcggatggacacgctggcgcacgtgctctactacccgcacaagcccttggtg
acgacgcgctccatggagtacctgcggttccgggagctgcccgcgggaatcaactccgtg
gtcgccatcctgtgctacaccggctacaaccaggaggacagcgtcatcatgaacgcctcc
gccgtggagcgcggcttcttcagatccgtgttcttccggtcgtacaaggatgctgagtcg
aagcggattggggaccaggaagagcagttcgagaaacccacgcggcagacctgtcagggg
atgaggaacgcactttacgacaaactggacgacgacggtatcatatcacccgggattcgt
gtgtctggtgatgatgtggtcattggcaagaccatcaccttgccagacaatgaggacgag
ctggaaggcaccaccaagcgcttcaccaagcgggacgccagcacgttcctgcgcaacagc
gagacgggcatcgtggaccaggtgatgctcacgctcaacgccgagggctacaagttctgc
aagatccgcgtgcgctccgtcaggatcccgcagatcggggacaagtttgcgtcccgccac
ggccagaagggcacgtgcggcatccagtaccggcaggaggacatgcctttcacatgcgaa
ggtctcaccccagacatcatcatcaaccctcacgctatcccgtcacgtatgacgattggt
cacttgatcgagtgcctgcaaggcaaggtgtcatccaacaagggggagatcggcgacgcg
acgccgttcaacgacgcggtgaacgtgcagaagatctcggcgctgctgcaggagtacggc
taccagctgcgcggcaacgaggtgatgtacaacggccacacgggccgcaagatcaacgcc
cagatcttcctggggcccacctactaccagcgcctcaagcacatggtggacgacaagatc
cacagccgcgcgcgcgggccggtgcagatcctcgtgcggcagcccatggagggcagggcg
cgggacggcggcctgcgcttcggggagatggagcgggactgccagatcgcccacggcgcg
gcccagttcctgcgcgagcgcctcttcgaggtgtccgacccctacaggatccacgtctgc
aacttctgcgggctgatagccatcgccaacctgcgcaacaacaccttcgagtgcaagggc
tgcaagaacaagacccagatctcgcaggtgcggctgccgtacgccgccaagcttctcttc
caggagctcatggcgatgaacatcgccccccgcctcatggtcttgtga
DBGET
integrated database retrieval system
