KEGG   Bacillus rossius redtenbacheri: 134541271
Entry
134541271         CDS       T09888                                 
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
  KO
K15542  polyadenylation factor subunit 2
Organism
bror  Bacillus rossius redtenbacheri
Pathway
bror03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bror00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    134541271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bror03019]
    134541271
Messenger RNA biogenesis [BR:bror03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     134541271
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_IFT140_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd ASA1 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin DSE1_N Beta-prop_EIPR1 CFAP251_N WDR90_beta-prop_4th WD40_MABP1-WDR62_1st eIF2A Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_NOL10_N Beta-prop_WDR41 PEP5_VPS11_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_WDR11_2nd PAC11
Other DBs
NCBI-GeneID: 134541271
NCBI-ProteinID: XP_063240646
LinkDB
Position
18:29796802..29819675
AA seq 1139 aa
MLQVSPFSQPPPQIGLGLPNLSVPPPHHFPNRFHNDRGGHRGHFFQPFRPYPRPGPGGAA
TDAEFDGKRLRKSVMRKTVDYNSSVIKMLEGRVWQRDHRDRRALQPDVLYYPDLQPPHSY
ADNPINAVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQ
AHDSPVRTMVWSHNDVWMVTGDHAGYVKYWQSNMNNVKMFQAHKEALRGLSFSSTDHKFV
TCSDDGTLRIWDFMRCHEERILRGHGADVKCVDWHPQKGLIVSGSKDNQQPVKLWDPKTG
QSLATLHAHKSTVMDIKWNRNGNWLVTASRDHLLKLFDVRNLSQEVQTFRGHKKEASSVS
WHPCHEGLFASGGSDGAILFWHVGADKEVGGIEQAHDSIVWTLAWHPMGHILCSGSNDHS
SKFWTRNRPGDSMTDKYNLNTTPAGLPGIDELDMDEPAVIPGMGPEDKVDVEAGPEVASI
PGLDMAEAQDDKTKASQKKVPYSKPIPRNFQAQWNETGHSMIDESRDDDEAGRKDSLSEA
ISQLMETNPPPGVVPVAELQPQAIIIYGKLLQVEGNPLLQKAIAGGAEALSKLIHSGQLE
ELTDVLPQDELRSEGDEPGQGPTREDLDMRGPPPLYPPPLPDQDMRFAPGDVDLRRLPLD
EDLRGPPPGHAHFFADEDMRVPGSDVDLRRGPVALGPVHLDSPPPRRDSPAHGDAGDAPG
GARKVLLTTPQFRPGAPEQPPWMGSPHEAGPEYDHSAARGRGTFPHRDFGRGGRGSGVMN
MRPPFGPDVPGPFGRGRGMGPPPPFAPNANFQGARFPPGDVNAPGGMFQEENMHADGYGQ
FASRTGDADEREVGNVYGDNFGPGRPVEGTPEGMEYGPGENVPPAGTGFGPPRQQMGEMR
GAYGRGGRVHMVGAPRGHGGFYPPGRHGAGEGDGGNSAGPDRQPDPGFDARFGRGGMMSA
DRARGRGGFHQPARQRPGDGEENHRTDSTQDLRFGPAGRAGGGMRGRGAYHAPFRHGRAE
EELAFSEPDDDDMEEDPLELAQRIDKDLRDDEDGERAEYGSEGRQFAQQRRGYDEGGESD
GEGGKGEGWAAPPIRRVGQEDWAPARGSRGVQRGFRRPRGAARGRFRGGRPRRAGAPSF
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgttgcaagtttcaccattttctcaaccacctcctcaaataggcttgggccttccaaat
ctttcggttccaccaccgcatcattttccaaatcgtttccacaatgatcggggcggacac
agggggcatttctttcagccgttcaggccgtacccccggccgggccccggaggcgcggcg
actgatgccgagttcgatggcaaaagattgcgaaaatctgttatgcgaaaaactgttgac
tacaactcgtctgttatcaaaatgttggaggggcgcgtgtggcagcgcgaccaccgcgac
aggcgcgcgctgcagccggacgtgctctactaccccgacctgcagcccccgcacagctac
gcggacaaccccatcaacgcggtgacgacgcgcttcgtcaagacggccaccaacaagatg
cgctgccccatcttctgcatggcgtggacgcccgagggccggcgcctggtgacgggggcc
tccagcggggagttcacgctctggaacggcctcaccttcaacttcgagaccatcctgcag
gcacacgacagtcccgtgcgcaccatggtgtggtcccacaacgacgtgtggatggtgacg
ggcgaccacgccggctacgtcaagtactggcagagcaacatgaacaacgtgaagatgttc
caggcccacaaggaggcgctgcgcgggctcagcttcagctcgacggaccacaagttcgtg
acgtgctccgacgacgggacgctgcgcatctgggacttcatgcgctgccacgaggagagg
atcctccgagggcacggcgcggacgtcaagtgcgtggactggcacccgcagaagggcctc
atcgtgtcgggcagcaaggacaaccagcagcccgtcaagctgtgggaccccaagacagga
cagtccctcgccaccctgcacgcgcacaagagcacggtgatggacatcaagtggaaccgg
aacggcaactggctagtcacggcctcgcgtgaccacctgctgaagttgttcgacgtgcgc
aacctgtcgcaggaggtacagacgttccgaggccacaagaaggaggcgagcagtgtgtcg
tggcacccctgccacgaggggctgttcgccagcggcggctctgatggtgcaatcctcttc
tggcacgtgggggcagacaaggaggtgggcggcatcgagcaggcccacgacagcatcgtg
tggacgctggcctggcaccccatgggccacatcctctgctccggctccaacgaccacagc
agcaagttctggacgcgcaaccgcccgggcgactccatgacggacaagtacaacctcaac
accacgcccgctggcctgccgggcatcgacgagctggacatggacgagccggcggtgatc
cccggcatggggcccgaggacaaggtggacgtggaggcggggcccgaggtcgcctccatc
ccggggctggacatggccgaggcccaggacgacaagaccaaggcgtctcagaagaaggtg
ccgtactcgaagcccatccctcgcaacttccaggcgcagtggaacgagacgggccactcc
atgatcgacgagtcacgagacgacgacgaggcaggccgcaaggactccctgtcagaggcc
atctcccagctgatggagacgaaccccccgcccggagtggtgcccgtggcggagctgcag
ccccaggccatcatcatctacggcaagctgctgcaagtcgagggcaacccgctgctgcag
aaggcgatcgcgggcggggcagaggccctcagcaagctgatccactcgggccagctggag
gagctgacggacgtgctgccccaggacgagctgcgctccgagggcgacgagccgggccag
ggccccaccagggaggacctggacatgaggggccctcccccgctctacccgccgcccctg
cccgaccaggacatgcgcttcgccccgggcgacgtggacttgcgccgcctgcccctggac
gaggacttgcggggcccgcccccgggacacgcccacttcttcgcggacgaggacatgcgg
gtgccgggcagcgatgtggacctgaggcgtggccccgtggcgctggggcccgtgcacctg
gactcgcctccgcctcgcagggactcgccggcccacggggacgccggcgacgctccgggc
ggggcgaggaaggtgttgctgaccacgccccagttcaggcccggggcccccgagcagccg
ccctggatgggcagcccccacgaggccggcccggagtacgaccactccgccgcacgaggt
cgcggcaccttcccccaccgagactttggcagagggggccgcggttcgggcgtcatgaac
atgaggccaccgttcggcccggacgtgcccggccccttcggccgtgggaggggaatgggc
cccccgccacccttcgccccgaacgccaacttccagggcgctcgcttcccgccgggggat
gtgaacgccccgggaggcatgttccaggaggagaacatgcacgcagatggctacggccag
ttcgcgagcaggacgggcgacgctgacgagcgtgaggtaggcaacgtgtacggagacaac
ttcgggcccgggcggcccgtggaaggcacacccgagggtatggagtacggcccgggagag
aacgtgccgcccgccgggacggggttcgggcctcccagacagcagatgggtgaaatgcgc
ggtgcctacggtcgtggcggcagggtgcacatggtgggagctccgcggggacacggtggc
ttctaccctcccgggaggcacggcgcgggggagggcgacggaggcaactcggcaggcccc
gaccggcagccggaccctggcttcgacgccaggttcggacgcgggggcatgatgtccgcg
gaccgcgcgagggggcgaggcggcttccaccagcccgcgaggcagcggccgggcgacggc
gaggagaaccacaggacggacagcacgcaggacctcaggttcggccccgccgggagagcg
ggaggcggcatgcgcggccgaggggcgtaccatgcgcccttcaggcacggccgagcggag
gaggagctggcgttctcggagccggacgacgacgacatggaggaggacccgctggagctc
gcgcagcgcatcgacaaggacctgcgcgacgacgaggacggcgagcgcgcggagtacggc
tcagaggggaggcagttcgcgcagcagcggcgcggctacgacgagggcggcgagagcgac
ggcgagggtggcaagggggagggctgggcggccccgcccatcaggcgcgtgggtcaggag
gactgggctccggcgcgcgggagccgtggcgtgcagagggggttccgtcggccgcgcggg
gctgctcgcggcaggttcagaggcgggcggccacgccgcgcgggcgccccgagcttctga

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