Bacillus rossius redtenbacheri: 134541405
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Entry
134541405 CDS
T09888
Name
(RefSeq) uncharacterized protein LOC134541405 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134541405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bror03041
]
134541405
03009 Ribosome biogenesis [BR:
bror03009
]
134541405
Enzymes [BR:
bror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134541405
Spliceosome [BR:
bror03041
]
Complex A
U1 snRNP components
U1 related factors
134541405
Complex B
134541405
Ribosome biogenesis [BR:
bror03009
]
Eukaryotic type
Pre-60S particles
Helicases
134541405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
DUF1744
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134541405
NCBI-ProteinID:
XP_063240898
LinkDB
All DBs
Position
18:6398853..6463019
Genome browser
AA seq
702 aa
AA seq
DB search
MYSNSFANQMYRGANREQMGSKNRYWRSQQAQSEVVDQKPGSKGRQPGENLRKPHWDSGS
LQPFLKNFYVPHANILGRSVEEIDKYRNSKAITVKGNNVPHPNQFFEEGNFPDYVMQEIL
KQGFAEPTAIQAQSWPIVLSGRDLVGIAQTGSGKTLAYVLPATVHINNQQRLGWGEGPIV
LILAPTRELAQQIQTVARDFGSSSLIRNTCVFGGAPKGPQARDLERGVEIVIATPGRLID
FLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALA
EDFLTDYIQVNIGSLQLAANHNIIQIVDVCQEHEKEEKLSKLLREIGADKGNKTIIFVET
KKKVDDITKAIRREGSFPAISIHGDKSQPERDYVLTDFRNGKSSILVATDVAARGLDVED
VKYVINFDYPNTSEDYIHRIGRTGRCNLTGTAYAFFTPNNARQAKDLIAVLEEAEQKINP
KLVEMANLAKNSFGGRNRWNSRNKEGGSGQAHAKASGSPTWSQGSQGARFAGVNGSVRGQ
EAYRGGGSGGGYHYGQQGGYQQQGGYGQQGGHYQQQGGSPAGRAYAGQGMGGGYQGHQGH
QGHQGQRFNRGNQGYAGGGSGGSAQQHSPHHGMYSVPPPFVLQPTTEASMQSILNSKFFQ
SSRPPPTNPCAYQNMAANPFGQYHQPVPPYAYGYGQPAAVQQ
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcaacagttttgccaatcaaatgtaccggggggctaaccgggagcagatgggg
tctaagaataggtactggaggagccagcaggctcagagcgaagtagtggaccagaagccc
gggagcaagggcaggcagccgggcgagaacctcaggaagccccactgggactcgggcagt
ctgcagccgttcctcaagaacttttacgttccgcacgcaaacattctcggcaggtcggtg
gaggagatagacaagtaccggaacagcaaggccatcaccgtcaagggaaacaacgtccct
catccgaaccagttcttcgaggagggcaacttcccggactacgtgatgcaggagatcctg
aagcaggggttcgcggagcccacggccatccaggcccagagctggcccatcgtgctgagc
gggcgcgacctggtgggcatcgcgcagacgggctcaggcaagacgctggcctacgtgctg
cccgccacggtgcacatcaacaaccagcagcgtctcggctggggcgagggccccatcgtg
ctgatcctggcgcccacgcgcgagctggcccagcagatacagaccgtggcgcgggacttc
ggctcctcctcgctcatccgcaacacctgcgtcttcggcggcgcccccaagggcccgcag
gccagagacctggagcgtggtgtggagatcgtaattgcgactcctggacggctgattgat
ttcctggagagaggcattactaatctccggcgctgcacctacttggtcctggacgaagca
gacagaatgctggatatgggtttcgaaccacagattcgcaaaattatcgagcagattcgg
cccgatcgccaggtgctgatgtggtcggcgacgtggcccaaggaagtgcaggctctcgcc
gaagactttttgacagattacattcaggtaaacattgggtcactgcaacttgctgccaat
cataacatcattcagattgtggacgtgtgtcaagaacacgagaaggaggagaagctgtcg
aaacttctcagagaaattggagcagacaaggggaataaaacgataatcttcgtagaaaca
aagaagaaagttgatgacatcaccaaggcaattcgtcgtgaaggcagttttccagcaatc
agcattcatggtgacaaatctcaaccagagagagattatgttctcacagattttagaaat
ggcaagtcatctatcctggttgcaacagatgtagcagcaagaggtcttgatgttgaggat
gtgaagtatgtcatcaactttgactacccaaacacatcagaagattacatccatcgcatt
ggacgcactgggcgttgcaatttgacaggaacagcctatgcattcttcacgccaaacaac
gcgcgccaggccaaagacttgatagcagtgctggaagaagctgagcagaagataaatccc
aaactggttgaaatggctaacttggctaagaactcttttggaggccgtaaccgctggaac
agccgcaacaaggagggcggcagcgggcaggcgcacgcgaaggccagcggctcgcccacc
tggagccagggctcgcagggcgcgcgcttcgcgggcgtgaacggcagcgtgcgcggccag
gaggcgtacaggggcggcggcagcggcggggggtaccactacggccagcagggcggctac
cagcagcagggaggctacggccagcagggcggccactaccagcagcaggggggcagtccc
gcggggcgcgcctacgccggccagggcatggggggaggctaccagggccaccagggccac
cagggccaccagggccagaggttcaacaggggcaaccagggctacgcggggggtggcagc
gggggctctgcccagcagcactcgccacaccacggcatgtactcggtgccgccgcccttc
gtgctgcagccgaccaccgaggccagcatgcagagcatcctcaacagcaagttcttccag
tcgagccgcccgccgccgaccaacccctgtgcctaccagaacatggccgccaaccccttc
gggcagtaccaccagccggtgccgccgtatgcctacggctacggccagcccgcggccgta
caacagtaa
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