Bacillus rossius redtenbacheri: 134541407
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Entry
134541407 CDS
T09888
Name
(RefSeq) uncharacterized protein LOC134541407 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134541407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bror03041
]
134541407
03009 Ribosome biogenesis [BR:
bror03009
]
134541407
Enzymes [BR:
bror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134541407
Spliceosome [BR:
bror03041
]
Complex A
U1 snRNP components
U1 related factors
134541407
Complex B
134541407
Ribosome biogenesis [BR:
bror03009
]
Eukaryotic type
Pre-60S particles
Helicases
134541407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
134541407
NCBI-ProteinID:
XP_063240904
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All DBs
Position
18:6312731..6389356
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AA seq
550 aa
AA seq
DB search
MIYPVTRRALSGVRLVTGCINCNVVRAASAAVSRRHYCMSSRGGSRFGSRWGGGGGGGGG
GGGGGRRGDDFGQDLAAQTWNISSLRPFLKDFYVPHRNVLKRHPHDVEDYRAERQITVKG
KDVPNPIQEFAEGNFPDYVMKGIQAAGFDTPTPIQAQGWPIALSGQNMVGIAQTGSGKTL
AYILPAIVHINHQEHLSSGDGPIALVLAPTRELAQQILVVAKEFGSTSRVRSTCVFGGAP
KHSQMRDLRQGVEICIATPGRLIDMLKTKVTNLRRCTYLVLDEADRMLDMGFEPQIRKII
GQIRPDRQVLMWSATWPKEVRKMAEDFLKEYSQINVGSLELCANHNIVQIVDVCQEHEKE
EKLGKLIQEISSERDAKTIIFVGTKRKVELITKLLCRYGYPAVCMHGDKTQIERDRVLNQ
FREGRAPILVATDVAARGLGECSPCARQVAVGTRGESQTVRAEPHCHICSCLPGHARLHF
LQFLPSVARAELNFMEATFSPVYRHIGCSVVRAELNYECTVKFFFNYYIPDAFNGLRILL
SLDYRTLSLG
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcctgtcacgcggcgggccctgtccggagttaggctggtcactggttgcatt
aattgtaatgttgtgcgggctgcgagcgcggctgtttctcggcgacactattgcatgtcg
tcccgtggtggcagtcgcttcggcagcaggtggggcgggggcggtggagggggtggtgga
gggggagggggcggcaggagaggagacgacttcggacaggacctggcggcccagacgtgg
aacatcagctcgctgcgtcccttcctcaaggacttctacgtgccccacaggaacgtgctc
aagagacatccgcacgatgtagaagactacagagctgaacggcagatcacggtcaagggt
aaagacgtgcccaatcccatccaggagtttgctgaaggcaactttcctgactacgtcatg
aagggaatacaagctgcagggttcgacactcccacgccgatccaggctcagggctggccc
attgctctgagcggccagaacatggtcggcatcgcacagacgggctctgggaagaccttg
gcttacatcctgccggccatcgtgcacatcaaccaccaggagcacctctcgtcgggcgac
gggcccatcgcgctggtgctggcgcccacccgggagctggcccagcagatactcgtggtg
gccaaggagttcgggtccacgtcgcgcgtgcgcagcacttgcgtgttcggaggcgcgccc
aagcactcgcagatgagggatctccggcaaggggtggagatatgcatcgccacgcccggc
cgcctgatcgacatgctcaagaccaaggtgacgaacctgcgtcgctgcacctacctggtg
ctggacgaggcggaccgcatgctggacatgggcttcgagccgcagatacgcaagatcatc
ggccagatcaggccggacaggcaggtgctgatgtggtccgccacgtggcccaaagaggtg
cgcaagatggcggaggacttcttgaaggagtactcgcagatcaacgtcggctcgctggag
ctgtgtgccaaccacaacatcgtccagattgtcgacgtgtgccaggagcacgagaaggaa
gagaagctgggtaaacttattcaagaaatttcatcagaacgagatgccaaaaccattata
tttgtgggaaccaagaggaaagttgaactaatcacgaagctgttatgcagatatggctac
cctgctgtgtgcatgcatggagacaagacacaaattgagagagaccgtgttctaaaccag
ttccgggagggaagagcgccgatcctggtggcgactgacgtggcggcgcgcggactgggt
gagtgctcgccgtgcgcgcgtcaagttgcggtggggacgaggggagagtcccagactgtc
cgtgccgagccacactgccatatttgctcatgccttcccggccacgccaggctgcatttt
ctccagttcttaccgtctgtagcgcgcgccgagctaaactttatggaggctacattttct
ccagtttaccgtcacattggctgttcagtagtgcgcgccgagctaaactatgaatgtaca
gtgaagtttttttttaattactacattcctgatgcctttaatggtcttcgaatactgcta
tctttggactatcgaactctcagtttaggttaa
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