Bacillus rossius redtenbacheri: 134541911
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Entry
134541911 CDS
T09888
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134541911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134541911
03036 Chromosome and associated proteins [BR:
bror03036
]
134541911
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134541911
Chromosome and associated proteins [BR:
bror03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134541911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
HARP
Motif
Other DBs
NCBI-GeneID:
134541911
NCBI-ProteinID:
XP_063241724
LinkDB
All DBs
Position
4
Genome browser
AA seq
1822 aa
AA seq
DB search
MFPNLKPAFGQQTATPAFGSGFTGATSASPFGASTTFGKTPTTGFGTPAFGSTSTPLFGS
STQNTGGLFGQTATPVFGQTQTTQPSFGGFGSNTSGGLFGAQPNANTGGLFSNTGSSAFG
QSKPAFGGFGSSIGTGLFGQTQQTQAQTPGTTSLFGQSSGTTSTGLFGSGGFGVSTNATA
AVGTPLKFNPVTGTDTMVKNGVSQTINTRHHCITCMKEYESKSLEELRMEDYAANRKGPQ
QATQAGGLFGGAAQPLFGGASTSTAGTSGMFGEKSLFGSTTGMGFGSSPGFGSTTQSGGL
FSKPPQFGALATTSSTGFSFNTTTTANPFGAAAQAKPFGAVAPQQSNLFGTPASQPSTGF
GTTNFGFSTQPNQSIGLFNQNKPFSLNTTSTGFSFGQNTVTNTGSLFGAKPGGTTSFGTF
GSTPSTGFGATGTSLFNQPFKPASTGFTFNQTGATNTGGLNLGGQPSLFNNPANKPGGLF
GTTGSLFGSGGLGTGSTFGTGTGLGGSALNFGTTTMLGGANAGLQTSQQPNNQIHQQIMA
LASMPFGDSPLFRNLLPATGKTEELLKSSRPITQKDSPNQFKVTPKGTSKVKVRPIGITT
TTKNSLFDGIDDEDALLATTFRPKTNSVRRLLIKPKPNNDSSDAVVTGSSPSFAYRTAQA
GSDKENEPDTSTIGSSRKLSWLQNHSAQASPSEELHPEEKGKSNSPNKWSPGNDENNVVL
TDTISDLRLGRNNFGADSRRDRKISGSSSDESVVVEDIAPLSASGDAHPAGIVLRRAEYY
TIPSLAELATLVAEDGSCVVDNFTVGREGYGNVYFPDSFDVAGLNLDEIVHFRHKEVTLY
PDDDNKPPVGQGLNRRAQVTLDRVWPMDKAKRKPIVDPERLAQMGYEEKLLRVCAKLNTR
FLDYRPQTGSWVFKVDHFSKYALSESDEEDDPPDNASKPKKATILVKKHVGETLVASQQH
LKISSSETSIAKDVSRHGLSLVEDDQDMEDSMFKTPEHDFGDLETAVSPTSQLARHVGAS
PHMTRLMKASLFMDDDDDDELQNDLEAARMTNSAFGSLLRVRTSKQQAMEDVVEELEVTP
VPGSIIRSKFTTDDTKIVPHVVKEQVVPVPTSPLPMTLPTWVPVPTTRPTVRVLKHQHER
VHLAESMCGRVGAACFADVSLMMGWKFGASWGPAGSFVTLTTRNMAAVVPLRAGLLDLGA
FTCGRPQGDYSPCIVQRLRLTGGDCYSLSGSFQETVEGHLEVQLKNSVLKMEEECPLFSP
SPGLDALDLHSQLANQLQEQAGPDRYLTYCAQVLQLCVALWGSLPLSGEEVSAHQKALLR
REAVSQWLQEVVSPRVEQETAEIQQKPSEDVERHIPAVLSLLSAYKIKEACDQLQNAGDH
VAAMLLSLTGSTPKVNKTVQQCLADWNYVELDYFVNPKRLRMFLLVSGMPIFSSKHGMIN
VFKNLDWKRTFAVHLWYMCSRVATVVDALLLYEEAFRAQDTEPYACPPHPPYVEDDLLHV
EVSSGRPVWDLCFHLLKLYSDHSYPLQQMLNPSTHTPDPLDYRLSWLVMVIMDAIGYSNL
SEYCAAQIHTSFASQLESHGLWHWAVFVLLHLKQKASRKAAVLEVLGRHVELNTQKDYQD
KEAFVIEHLKIPKKWIFGSRATLALSQKRYKDAAWFLIQGELWKDSHDVIMEHIAADAII
YEDYEYLHELLQELAPSERSATISKWPTMGQVLWDFINMQSGLKRLLSEPDEVTAYHLEK
LQYELANLCSRIGSLPVPTAKHTLCQVEIAERISALFRSLSACAQSQNQLRASAMLCDSL
PLPGDYTQQALNQISSQYVLPS
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaaatctgaagccagctttcggccagcaaactgccacaccagcgtttggtagt
ggatttactggagccaccagcgccagtccttttggtgcatcgacgacatttgggaagacc
ccgacaactggttttggtaccccggcatttgggtcgaccagcaccccattgtttggcagt
agcacccagaacactggcggcctctttggtcagaccgcaacgccagtgtttggccagact
cagaccacccagccctcgtttggcggctttggttctaacacgagtggcggtctgttcggt
gcccagccgaatgctaacactggggggctgttcagtaacactggctcatctgctttcggc
cagagcaaaccagcttttggaggctttggctcatccattggcactggcctgtttggacag
acgcagcaaactcaggcccagacaccagggaccacttcactgtttggtcagtcaagtgga
accactagcacaggactctttggatcaggagggtttggggtgagcaccaatgccacagct
gcagttggtacccccctgaagttcaaccctgtgaccggcactgacacgatggtcaagaac
ggggtgtctcagaccataaatacacggcaccactgcatcacttgcatgaaggagtacgag
tctaaatccctggaggagctgcgaatggaggactacgcagccaaccgcaaaggaccgcag
caggcgacccaggcgggtggtctcttcggtggcgctgcacagccgctgtttggtggcgcg
agcaccagcaccgctggcaccagtgggatgttcggcgagaagtccctctttgggagcacc
acaggaatggggtttggttcgagccctggttttggatcaaccacacagtcaggtggactg
ttttctaaaccacctcaatttggagcgcttgcaactacttcaagtacaggattttctttc
aatactaccactactgcaaacccatttggggctgctgctcaggcaaagcctttcggagct
gtggcaccacagcagagtaacttatttggaacacctgcatcacaaccttctacaggattt
ggaacaactaattttgggttcagcactcagcctaatcagagtattggcctgttcaaccaa
aataagccattcagcctcaatacaacaagtacaggattttcctttggtcagaacacagtt
accaacactggaagcttgtttggggcaaaaccaggtggcacaacaagttttggaacattt
ggaagcactccatccactggttttggagctactggtacatctttgttcaaccagcccttc
aaaccggcatctacaggatttactttcaatcagacaggtgctactaacacaggtggtttg
aatctgggagggcagccatcactgttcaataacccagcaaacaagcctggaggtcttttt
ggcaccactggaagtctttttggcagtggtggcctcggcactggatccacttttggcaca
ggaacagggctgggtggatccgcccttaacttcgggacaaccacaatgcttggaggagca
aacgctggtctgcagacgagccaacaacccaacaatcagatccaccagcagatcatggcg
ctcgcttctatgcctttcggagactctcccttgtttcgaaacttgcttcctgccacagga
aaaactgaagagctgttaaagtcaagcagacccattacacagaaagactctcccaatcag
tttaaagtcacacctaaaggaacaagcaaagtcaaagtgaggcctattgggattacaaca
acaacaaagaactctctctttgatggtatagatgatgaagatgcattgttggccaccact
ttccgccccaagaccaacagtgtgcggcgtttactgatcaagccaaagcctaataacgat
tcgtcagatgcagttgtaactgggagctctccttcgtttgcgtaccgcacagcacaggct
gggtctgataaggaaaatgaaccagatactagtacaattggaagcagtcgaaaactatct
tggttgcaaaatcattcagcccaggcctctccatcagaagaattacacccagaagaaaaa
ggaaaaagtaattcgcctaacaagtggagccctggcaatgatgaaaataatgttgtgctg
acagacacaatatcagatctgagacttggaagaaataattttggtgctgattccagacgt
gatagaaaaatcagcggcagtagttcagatgagagcgtggttgtagaagacattgccccg
ctatcagccagtggggatgcccaccctgcgggtatagtcctgcgcagggcagagtactac
accattccgtcgcttgctgagctggccacgcttgtggccgaggacgggagctgtgtcgtc
gacaacttcactgtcggcagggagggctatggcaacgtgtactttcccgactcgtttgat
gtggcaggtctcaatttggatgaaatagtgcacttccgacacaaagaggtgacgctctac
ccagacgatgacaacaagccacctgtgggccagggcttgaaccggagagcacaggtgacg
ctggatcgtgtgtggccgatggacaaggcaaagcgaaagcccatcgtagatccagagcgt
cttgctcagatgggctatgaggaaaaactacttagagtatgcgcaaaactgaataccagg
tttttagactatcggcctcaaaccggatcatgggttttcaaggttgatcacttctcaaaa
tatgctctcagtgaatcagatgaagaagatgacccacctgataatgctagcaaaccaaag
aaggcaacaatattagtgaagaaacatgtaggtgaaactttagttgcctctcagcaacac
ttaaaaatatccagttctgagactagtattgctaaagatgtcagcagacatggtttatct
ctggttgaggatgatcaagatatggaagatagcatgttcaagacaccagaacatgatttt
ggtgaccttgagacagcagtcagtccaacttcgcagcttgcaaggcatgtgggggcttca
ccacacatgacacgactaatgaaggcttctttgttcatggatgatgatgatgatgatgaa
ttgcaaaatgatttggaagctgccaggatgactaattctgcattcggcagtctcttgcga
gtccgtacttcaaaacaacaggcaatggaggatgttgttgaagaattagaagtgactcct
gttcctggttccattattcgatcaaagttcaccactgatgacactaaaatcgtgcctcat
gttgtgaaagaacaagtggtgccagtacccaccagccctctaccaatgactctaccaaca
tgggtgcctgtgccaaccacacgccccactgtgcgtgttttgaaacaccagcacgaacgc
gtacatttggcagaatccatgtgtggacgtgtgggcgcagcgtgcttcgcagacgtgagc
ctcatgatgggttggaagtttggtgccagctggggcccggcgggatcctttgtgacgctc
accacgcgcaacatggcggctgtggtgcccttacgcgctgggctgctcgacctgggggcg
ttcacttgcggccggccgcagggcgactactccccgtgcatcgtgcagaggctgagactc
accggcggagactgctacagtttgagtggttccttccaggagactgtagagggacacctg
gaagtacagctgaaaaacagtgtcctgaagatggaagaagagtgcccgttgttctctccg
agtcccggcttggatgccctcgacctccacagtcagctggccaaccagctccaggaacag
gccgggccggaccgctacctcacctactgcgcccaagtgctgcagctctgcgtggctctg
tggggcagcttgccgctgtctggtgaggaagtgagtgcgcaccaaaaggcacttctccgc
cgggaagcagtgagtcagtggctgcaagaggtggtttccccaagagttgagcaggagaca
gcagagatacagcagaagcccagtgaggacgtcgaacgccacattcctgccgtcctatct
ttgctgtctgcatacaagataaaagaagcctgcgaccagttgcagaatgctggagaccat
gttgcggccatgctactcagccttactggcagcaccccaaaggtcaacaagacggtgcag
cagtgtctggctgattggaactatgttgaactggactactttgtcaaccctaaaaggcta
cgcatgttcctactagtttcgggcatgccaattttctcatcaaaacatgggatgataaac
gttttcaagaatctggactggaagagaacgtttgctgtgcacctctggtacatgtgctcg
agagttgcgacagtggtagatgctctactactgtacgaggaagcattcagggcacaagat
acggagccctacgcatgtcccccgcacccaccgtacgtggaggatgacttgttgcatgtg
gaggtgagcagtggacgccctgtgtgggacctgtgcttccacctcctgaagctgtatagc
gaccactcttacccactgcagcagatgctgaatcccagcacacacacgccggaccccttg
gactaccgcctaagttggcttgtgatggtgatcatggatgcaattggctactcgaacctg
tcagagtactgtgcagctcagatccataccagctttgcctctcagctggagagccatggc
ttgtggcattgggctgtgtttgttctgctccatctcaagcagaaagccagtcgcaaggct
gctgtacttgaagtattgggccgccatgtcgagttgaacacacaaaaggactaccaagac
aaggaagcttttgttatagaacatttgaagattcccaagaaatggatttttggatccagg
gccactcttgcactttcacagaagaggtataaggatgcagcatggttcctgatccaagga
gaactatggaaagatagtcatgatgtgataatggagcatatagcagctgatgctatcatt
tatgaggactacgaatacctgcatgaactgctgcaagagttggctccctccgagcgaagt
gcaaccatctccaagtggcctaccatggggcaggtgctgtgggacttcatcaacatgcag
tcgggtctgaagagactgctcagtgaaccagatgaagtgactgcttaccacctggagaag
ttgcagtatgagctggcaaacttgtgttccagaattggctcgcttccagttcctactgcc
aagcacactttgtgccaggtggagatagcagagcgcatatctgcattgttccgcagtttg
tcggcatgtgcgcagtcgcagaaccagttgcgagccagtgcgatgctgtgcgacagtctg
ccgctgccaggtgactacacgcagcaagctctgaaccaaatatccagccagtatgttttg
ccttcgtag
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integrated database retrieval system
