Bacillus rossius redtenbacheri: 134542041
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Entry
134542041 CDS
T09888
Name
(RefSeq) mismatch repair endonuclease PMS2-like isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03430
Mismatch repair
bror03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
134542041
03460 Fanconi anemia pathway
134542041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bror03400
]
134542041
DNA repair and recombination proteins [BR:
bror03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
134542041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
134542041
NCBI-ProteinID:
XP_063241962
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Position
1:complement(110098088..110169883)
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AA seq
949 aa
AA seq
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MDDVLPATSAKPNSIGVLNKDSVHKICSGQVVLNLATAVKELVENSLDAGATAVEVRLKE
HGSQLIEVTDNGCGVQEHDFQGLAMKHYTSKLQEFSDLTCVETFGFRGEALSSLCAVSEM
SVLTCHASAACGSRLEFDHRGLITSCKPHPRQVGTTVILANIFCTLPVRQKEFHRNLQKE
FAKMVQLLYGYCLVSTGVKISCSNHTQKGKTTLFSTHGAQTVRENIASVFGTKQLQNLMN
IPEDLPSEAALMDLGLSPQLAGKRDLFRLEGHVTSCAHGQGRGAPDRQFFYVNSRPCEPA
KVMRCVNDVFHQFNRHQYPFVFLNIKTSRQNVDVNITPDKRQVFIDCEKLMVFIVKASLL
HLYDSVPSCIPVFTSSPTSTPTQSPTSGANIAAMLSRWSQSPSQAAPTLDQRQQFGGVKR
KEAAQEKNGHKQLRLSQFIASSTDVNPDKTVNFVTTPVVNSTCDLSYADTNHERNHVGVD
DAFATQGQSDCETLPVNNVQLCTVAPTVSSCTSTGNRVGTQTNSVRSGLVVDDVGEIAVS
GTGVNTVEENYSTKASREGTTSPLGRLQEEFKDIKCAMDSNEETLTSACNNSCNDSGVNR
RQDVIPSDDIERLHQEDEKGSPHIDLENSHDLERIESDSEAVPYVARIQNANSADDFEKR
TLLVTKTSGVLTDEEFGSPPVIRKVVVMSVTISNVREQFDLQTRLKNVSLEDGDKHSIKF
CAEINPLKNSVAEEELSREVTKNNFPQMAIIGQFNLGFIITRLGPDLFLIDQHASDEKYN
FEMLQKNQALKSQTLVVPQTLELTAVSENILMENMEIFQKNGFDFVVSDEAEPTKKVKLA
AIPICKNWVFGKEDINELLFMLQDAPNTMCRPSRVRMMFASQACRKSVMIGAALSRSDMR
RLVDHMAEMERPWNCPHGRPTMRHLVNLVMCDKLASNAIKALAQSAVSS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtattgccggcaacgtctgcaaaacctaatagcattggcgtgttaaataaa
gattctgttcacaaaatttgctcagggcaggtagttctgaacctggccacagcagtgaag
gaactagtggaaaacagcctggacgccggggcgacagctgtagaggttcgtctcaaggaa
catggcagccagttgattgaagtcactgataatggctgtggcgtgcaggagcatgacttc
cagggtcttgccatgaagcattatacttctaaactgcaagagttttctgacctgacgtgc
gtcgaaacatttggtttccgcggtgaagccctcagctccttgtgtgccgtcagtgaaatg
tctgtgttgacatgccatgcatctgcggcatgcggctccagactggagttcgaccacagg
ggcctcatcacctcctgcaagccgcaccctagacaggttggaaccacggttattctagcc
aacattttctgcactttgcccgtgaggcaaaaagaatttcaccggaatcttcagaaagaa
tttgctaaaatggttcaactactctatggttattgcttggtttcaacaggagtcaaaatt
tcatgttctaaccatacacaaaaaggaaaaacgacactgttctctacacatggtgctcag
actgtgcgggagaacatagcatcagtatttggaactaagcagttgcaaaatctcatgaat
attcccgaggacttaccctcagaggctgcgctcatggacttgggcttgtcgccccagctg
gccggcaagagggacttgttccggctagaaggccacgtgacgtcctgtgcacacggccag
ggccgcggtgcccccgacaggcagttcttctacgtcaactcccgaccgtgtgagccggcc
aaggttatgagatgtgtaaatgatgtattccaccagttcaacagacaccagtaccctttt
gttttcctcaacataaaaacctctcgacagaacgtggatgtcaatatcacaccagataag
agacaagtttttattgactgcgagaaacttatggtattcattgtcaaggcttccctcctc
cacctgtatgacagtgtcccctcctgcattccagtattcacttcaagtcccacctccacc
ccgacccagtcgccgaccagtggcgccaacattgcagccatgctgagccggtggagccag
tcgccgagccaagctgcgcccactctcgaccagcgccaacagtttggaggagtgaagagg
aaggaagcagcacaggagaaaaatggccataagcaactccggctgagtcagtttatcgcc
tcttcaacagatgtaaatccagacaagacagtcaattttgtgacgacacctgtggtaaat
agtacatgtgatctttcatatgctgatacaaaccatgaacgaaaccatgtaggagtggat
gacgcatttgccacccaggggcagagtgactgtgagacgttgccggtcaataacgtgcag
ctgtgtacagtggcacccacagttagttcatgcaccagcacaggcaaccgtgtaggaact
caaacaaactctgtacgttctggccttgttgtggatgatgtgggggaaattgctgtttct
ggtaccggcgttaacactgtagaagagaactattctacaaaagccagcagggaaggaacg
acctctccattaggaaggttacaggaagagtttaaagatatcaagtgtgccatggacagt
aatgaggaaacgttaacttctgcttgtaataacagctgtaacgatagtggtgtaaataga
agacaggatgtcattccctctgatgacattgaaagattacatcaagaagatgaaaaagga
tcacctcatattgatttggaaaattcacatgaccttgaaagaatagaaagtgactcagaa
gctgtaccttatgttgcacgtattcagaatgcgaacagtgcagatgattttgaaaaaagg
acacttttagttactaaaacttcaggagtgttgaccgatgaagaatttggttctcctcca
gtgatccgtaaagtagtagtaatgtctgtgacaatcagcaatgtaagagagcagtttgat
ttgcaaacaagattgaagaacgtttcattggaagatggtgataaacattctatcaagttt
tgtgccgagatcaaccccttgaaaaacagtgttgcagaggaagagttatcgcgagaagtt
accaaaaacaatttcccacagatggcaataataggccagttcaacctgggattcatcatc
acacgccttggaccagatctgttcttgattgatcagcatgcgtcagatgaaaagtataat
tttgaaatgttgcagaagaaccaggctctgaaaagtcaaacacttgttgtgcctcaaaca
ttagaactcactgccgttagtgaaaatattctgatggaaaatatggaaatcttccagaag
aatggttttgattttgttgtgagtgatgaagcggaaccaacgaagaaggtgaaactagct
gctattccaatatgtaagaactgggtgtttgggaaggaagacatcaacgaactgcttttc
atgttgcaggatgcgccaaacacaatgtgccgaccctctcgagtgagaatgatgtttgca
tcacaagcctgccgcaagtccgtcatgattggggcagctctgagccggtcagacatgagg
cgacttgtcgaccacatggcagaaatggaacgcccatggaactgtccccatggtagaccg
accatgcgacatttggtgaatttggtaatgtgtgacaaattggcaagtaatgccataaaa
gcgcttgcacaaagtgctgtctcctcataa
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