Bacillus rossius redtenbacheri: 134546329
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Entry
134546329 CDS
T09888
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03013
Nucleocytoplasmic transport
bror03015
mRNA surveillance pathway
bror03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134546329
09122 Translation
03013 Nucleocytoplasmic transport
134546329
03015 mRNA surveillance pathway
134546329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134546329
03041 Spliceosome [BR:
bror03041
]
134546329
Enzymes [BR:
bror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134546329
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134546329
Spliceosome [BR:
bror03041
]
Complex C
Other components
EJC/TREX
134546329
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134546329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
MoaE
Motif
Other DBs
NCBI-GeneID:
134546329
NCBI-ProteinID:
XP_063245164
LinkDB
All DBs
Position
1:complement(156150755..156216299)
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AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQPEQPVVDGSTDTGHKKEVKGTYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHT
RELAFQISKEYERFSKYMPQIKVGVFFGGLPIQKDEEVLKSSCPHIVVGTPGRILALVRS
KKLNLKHLKHFILDECDKMLELLDMRRDVQDIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDILEFNQVVIFVKSIQRCMA
LAQLLMEQNFPAIAIHRGMTQEERLSKYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNEVQDRFDVNITELPEEIDLSS
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatgacgatctccttgactacgaggatgaagagcagccagagcagccagtt
gtggatggatccacggacaccgggcacaagaaggaagtgaagggaacctatgtgtccata
cacagttctggcttcagggatttcctcttaaagcctgagatattgagagccatagtagat
tgtggttttgagcatccatcagaagtccagcacgagtgcataccgcaagcggtgctgggc
atggacatcctgtgccaagccaagtcgggaatggggaagacagcggtgtttgtcctggcc
acgctgcagcagttggaacccacggagaacgttgtgtacgtgctggtcatgtgtcacaca
agggagctggccttccagatcagcaaggagtacgagagattctcaaagtacatgccacag
ataaaggtgggagtgttctttggtgggctgcccatccagaaagatgaggaggtgctgaag
agcagttgtccgcacatagtggtggggacaccaggtcgaatactagcattggtgcgctcc
aagaagctcaacttgaaacacttgaaacacttcatattggatgagtgtgacaagatgtta
gagctcttagacatgaggagagacgtgcaggacattttccgcaacacgcctcacggcaag
caagtcatgatgttcagtgccaccctcagcaaggagatccgaccagtgtgcaagaagttc
atgcaagatccgatggaggtgtacgtagatgatgaggcaaagttgacgctccacggactg
cagcagcattatgttaagctcaaggagaacgagaagaacaagaaactctttgagttgctt
gacattttagaattcaaccaggtcgtcattttcgtcaagtccatccagagatgcatggcc
ctggcacaactgctcatggagcagaacttccctgccatcgcgatacacagaggcatgaca
caggaggagaggctctccaagtaccagcagttcaaggacttccagaagaggatacttgtt
gctactaacctgtttggcagaggcatggacatagaacgagtaaatattgtattcaactat
gacatgcctgaagattcagacacatatcttcacagagtagcccgtgcgggacgttttggt
acaaagggtttggccatcacatttgttagtgatgagggagatgcaaagatccttaatgaa
gtacaagataggtttgatgtgaacatcacggaactgccagaggagattgatctttcatca
tacattgaagggcggtaa
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