Bradyrhizobium roseum: QUH67_02580
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Entry
QUH67_02580 CDS
T09605
Name
(GenBank) cadherin domain-containing protein
Organism
bros
Bradyrhizobium roseum
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HemolysinCabind
Cadherin
EF-G_D2
Motif
Other DBs
NCBI-ProteinID:
WKA29104
LinkDB
All DBs
Position
540332..545770
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AA seq
1812 aa
AA seq
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MSGIGIDQAGIDADAAPATAQARLPATAVTRAAEPSSYETLDMDAAVRNEAPSDITVIGG
AVVENAAAGTVVAILGAADPDAGDSFVYTLTDPSGAFEIVGNEVRVKAGATLDFETAASH
DVGIEVTDAAGLTHRKTLTIAVTNRNEAPSDITVAGGSVVENAAGGTVVATLGVADPDAG
DSFVYTLTDPSGKFEIVGNEVRVKAGATLDFETATSHDVGIEVTDTAGLSHHETLTIAVT
NRNEAPSDITVAGGSVVENAVAGTVVATLGAADPDAGDSFVYTLTDPSGKFEIVGNEVRV
KAGATLDYETATSHDLGLTVTDAGGLSRSETLTIAVTNQSGSFTGIAANDVLTGSGEEDV
LSGLAGNDTLQGFAGNDTLSGGTGNDAMIGGSGNDTYVVDAAGDVVTELAGEGADTVQSS
VSYTLGAHVENLQLTGTAAINATGNTLDNFLTGNSGNNVLSGGAGNDTMAGGLGNDTYVV
DAAGDIVSELAGQGTDTVQSSITYALGADVENLLLTGTAAINGTGNSLANTLTGNTGDNV
LDGGAGNDAMAGGLGNDTYVVDNASDVVTEAVGQGTDNVLSSVSYVLGSNVENLSLTGTA
AINATGNTLNNVLTGNSGNNILSGGAGNDTMAGGLGNDTYVVDAAGDVVTELAGQGTDTV
QSSITYALGADVENLTLTGTAAINATGNTLDNLLTGNSGNNVLSGGAGNDTLSGGTGNDS
MIGGTGNDTYVVDAAGDVVTELAAEGADTVQSSVSYTLGANVENLTLTGTAAINATGNTL
DNVLTGNTGNNVLSGGAGNDTMIGGLGNDTYVVDAAGDVVTELAGQGTDTVQSSISYVLG
ADVENLTLTGTAAINGTGNSLANTLTGNTGDNVLDGGAGNDTMIGGAGNDTYIVNAATDV
VTELASQGTDTVLSSASFVLGSNVENLTLTGTAAINATGNTLNNVLTGNSGNNILSGGTG
NDAMIGGLGNDTYVVDAAGDVVTELAGEGADTVQSSVSYTLSDHVENLQLTGTGTINATG
NTLDNVLTGNSGNNILSGGTGNDAMIGGLGNDTYVVDAAGDVVTELATQGTDTVQSSISY
VLGSNVENLQLTGSAAINATGNTLANTLTGNTGDNVLDGGAGNDTMIGGGGNDIYVVDNT
SDVVTEAAGQGTDTVQSSVSHTLGANVENLQLTGSAAINATGNTLDNLLTGNSGNNVLSG
GAGNDTMAGGLGNDTYVVDAAGDVVTELAGQGTDTVQSSITYALGADVENLTLTGTGAIN
ATGNTLDNVLTGNSGNNVLSGGAGNDTLIGGTGNDTLIGGTGNDLYVVDAAGDVVTELAA
EGADTVQSSVSYTLGANVENLQLTGSAAINATGNTLDNVLTGNTGNNVLSGGAGNDTMIG
GLGNDIYVVDAAGDVVTELAAQGTDTVQSSIAYTLGANIENLTLTGTAAINATGNSLANT
LTGNTGNNVLDGGQGNDIMIGGGGNDTYVVDAATDVVTESASQGTDTVLSSASFVLGSNV
ENLTLTGTAAINATGNTLNNVLTGNSGNNILSGGAGNDTMIGGLGNDTYVVDAAGDVVTE
LAGQGTDTVQSSISYVLGADVENLTLTGTAAINATGNTLDNVLTGNSGNNVLSGGAGNDT
LIGGTGNDSMTGGTGDDIYVVDAAGDVVTELAAGGSDTVQSSISYTLGANVENLTLTGAA
AVNATGNTLDNVLTGNSGNNVLGGGAGNDTMTGGLGNDTLIGGDGNDVFVYMSGQGSDVV
QGGTGANWLDTIDLDQSLGSLQPASDWTISLTSGSIVSSGSNDMVFSSDASGVINFADGS
KIDFVEIERVQW
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggatcggaatcgaccaggccggtatcgatgccgatgcggcacctgctacagcg
caggcacgcctgcccgccaccgcggtcaccagggcggcggagccgagttcgtacgagacg
ctcgacatggatgcggccgttcggaacgaagcgccaagcgacatcacggtcatcggtggc
gcggtggtggagaacgccgcggccggaaccgtggtggccatcctcggcgcggcagatccc
gatgccggcgacagttttgtctacacgctgaccgacccctctggtgcattcgaaatcgtc
ggcaatgaagtgcgggtgaaggccggcgcgacgctcgacttcgagacggcggcctcgcac
gatgtcggcatcgaggtgaccgatgccgcaggcctgactcatcgcaagacgctgaccatc
gcggtgacgaaccggaacgaggcgccgagcgacatcaccgtcgccggcggttcggtggtg
gagaatgccgcgggcggcacggtagtggcaacgctcggcgtggcagaccctgatgccggc
gacagctttgtttacacattgaccgatccatcgggaaaattcgaaatcgtcggcaatgaa
gtgcgtgtgaaagccggcgcgacgctcgacttcgagacggcaacttcgcacgatgtcggc
atcgaggtcaccgatacggcggggctgagtcatcacgagacgctgaccatcgcggtgacg
aaccggaacgaggcgccaagcgacatcaccgtcgccggcggatcagtggtcgagaatgcc
gtggccggcacggtggtggcaacgctcggcgcggcggaccccgatgccggcgacagcttt
gtttacacattgaccgatccatcgggaaaattcgaaatcgtcggcaatgaagtgcgggtc
aaggccggcgcgacgctcgactacgaaacggcaacctcgcacgatctcggcctgacagtg
acggatgccggcgggttgagccgcagcgaaacgctgacgatcgccgtcaccaatcaatcc
ggatccttcaccgggattgccgcaaacgacgtgctgaccggtagcggcgaagaagacgtc
ctgtcgggtcttgccggtaacgacaccctgcagggctttgcaggcaacgacacgctcagt
ggcggcaccggcaacgatgccatgatcggcggttccggtaacgacacctatgtggtcgat
gccgcgggtgatgtggtcacggagcttgccggcgaaggcgccgacacggtgcagagcagt
gtcagctacacgctcggcgcccatgtcgagaacctgcagctgaccggaaccgccgcgatc
aatgccactggcaacacgctcgacaattttctgaccggcaacagcggcaacaacgtcctc
agcggcggcgccggcaacgacaccatggccggcggcctgggcaacgacacctatgtggtc
gacgcggccggcgacatcgtctcggagctggccggtcagggcaccgataccgtgcagagc
agcatcacttacgcgctcggtgcggatgtcgagaacctgctgctgaccggaacggccgcg
atcaatggcactggcaacagcctggccaacacgctgaccggcaacaccggcgacaacgtc
ctggacggcggcgccggcaacgacgccatggccggcggcctgggcaacgacacctatgtg
gtcgacaatgccagcgatgtcgtgacggaagcggtcgggcaaggcaccgacaatgtgctg
agcagcgtcagctatgtgctcggctccaatgtcgagaacctgtcgctgaccggaacggcc
gcgatcaacgccaccggcaacaccctcaacaatgtgctgaccggcaacagcggcaacaac
attctcagcggcggcgccggcaacgacaccatggcgggtggtctcggcaacgacacctat
gtggtcgacgcggcgggcgatgtcgtcaccgaactggccggtcagggcaccgacactgtg
cagagcagcatcacttacgcgctcggcgcggacgtcgagaacctgacgctgaccggaacg
gccgcgatcaacgccaccggcaacacgttggacaatttgctcaccggcaatagcggcaac
aacgtcctcagcggcggcgccggcaacgataccttgagcggcggcactggtaacgacagc
atgatcggcggcaccggcaacgacacgtatgtcgtcgatgccgcaggtgacgtggtcacg
gagcttgccgcggaaggggcagacaccgtgcaaagcagcgtcagctacacgctcggcgcc
aatgtcgagaacctaacgctgaccggaaccgccgcgatcaacgccaccggcaacaccctc
gacaatgtgctgaccggcaataccggcaacaacgtgctcagcggcggtgccggcaacgac
accatgatcggtggactcggcaacgacacttatgtggtcgatgcggccggcgatgtcgtc
accgaactggccgggcaaggcaccgataccgtgcagagcagcatcagctacgtactcggc
gccgacgtcgagaacctgacgctgaccggaaccgccgcgatcaatggcactggcaacagc
ctggccaacacgctgaccggcaacaccggcgacaacgtcctggacggcggcgccggtaac
gacaccatgatcggcggcgccggcaatgatacctatatcgtcaacgcggcgaccgacgtg
gttaccgaactggccagccagggcaccgacacggtgctgagcagcgccagttttgtgctc
ggctccaacgtcgagaacctgacgctgaccggaacggctgcgatcaatgccaccggcaat
accctcaacaacgtgctgaccggcaacagcggcaacaacattcttagcggcggcaccggc
aacgacgccatgatcggcgggctgggcaatgacacctatgtggtggatgcggcgggcgat
gtcgtcaccgaactggccggcgaaggcgccgacacggtgcagagcagtgtcagctacacg
ctgagcgaccatgtcgagaacctgcagctgaccggaaccggcacgatcaatgccaccggc
aacacgctggacaatgtgctgaccggcaacagcggcaacaacattcttagcggcggcacc
ggcaacgacgccatgatcggcgggctgggcaacgacacctatgtggtggatgcggcgggc
gatgtcgtcaccgaactggcaacgcaaggcaccgacaccgtgcagagcagcatcagctac
gtccttggcagcaatgtcgagaacctgcagttgacgggatccgccgcgatcaacgccacc
ggcaacacgctggccaatacgttgaccggcaacaccggtgacaacgtcctcgacggcggc
gccggcaacgacaccatgatcggcggtggcggcaacgacatctatgtggtcgacaacacc
agcgatgtcgtgacggaagcggctgggcaaggcaccgacaccgttcagagcagcgtcagt
cacacgctcggcgccaatgtcgagaacctgcaattgacgggatccgctgcgatcaacgcc
accggcaacacgttggacaatctgctgaccggcaacagcggcaacaacgttctcagcggc
ggcgccggtaacgacaccatggccggtggtctcggcaacgacacctatgtggtcgacgcg
gccggcgacgtcgtcaccgaactggccgggcagggcaccgacaccgtgcagagcagcatc
acttacgcgctcggcgcggatgtcgagaacctgacgctgaccggaaccggcgcgatcaat
gccaccggcaacacgctggacaacgtgctgaccggcaacagcggcaacaacgtcctcagc
ggcggcgccggcaacgacaccctgatcggcggcaccggcaatgacaccctgatcggcggc
acgggcaacgacctgtatgtcgtcgatgccgcgggtgacgtggtcacggagcttgccgcg
gaaggggccgacaccgtgcaaagcagtgtcagctacacgctgggcgccaacgtcgagaac
ctgcagttgacgggatccgccgcgatcaacgccaccggcaacacgctcgataatgtgctg
accggcaataccggcaacaacgtcctgagcggcggtgccggcaacgacaccatgatcggc
ggactgggcaacgacatttatgtcgtcgatgcggccggcgatgtcgtcaccgaactggca
gcgcaaggcaccgacaccgtgcagagcagcatcgcctatacgctcggcgcgaatatcgaa
aatctgacgctgaccggaacggccgcgatcaatgccaccggcaacagcttggccaacacg
ctgaccggcaataccggcaacaacgtcctcgatggcggccaaggcaacgacatcatgatc
ggcggtggcggcaatgatacctatgtcgtcgacgccgcgaccgacgtcgttaccgaatcg
gccagtcagggcaccgacacggtgctgagcagcgccagtttcgtgctcggctccaacgtc
gagaacctgacgctgaccggaaccgcggcgatcaacgccaccggcaataccctcaacaat
gtgctgaccggcaacagcggcaacaacattctcagcggcggcgcgggcaacgacaccatg
atcggtggtctcggcaacgatacgtatgtcgtcgacgctgccggtgacgtggtcaccgaa
ctggccgggcagggcaccgacaccgtgcagagcagcatcagttacgtgctcggcgcggac
gtcgagaacctgacgctgacgggaacggcggcgatcaacgccaccggcaacacgctcgac
aatgtgctgaccggcaacagtggcaacaacgtcctcagcggcggtgccggcaacgatacc
ttgatcggcggcacgggtaacgacagcatgacaggcggcacgggcgacgacatttatgtc
gtcgatgccgcgggtgacgtggtcacggagcttgccgcgggagggtccgacacggtgcaa
agcagcatcagctacacgctcggcgccaacgtcgagaacctgacgctgaccggcgcggcg
gcggtcaacgccaccggcaacacgctggacaatgtgttgaccggcaatagcggcaacaac
gtgctcggcggcggcgccggcaacgacaccatgaccggtggactgggcaacgacaccctg
atcggcggcgacggtaacgacgtcttcgtctacatgagcggccaggggtctgacgttgtc
cagggcggaacgggcgcgaactggctcgacaccatcgacctcgatcagagcctcggatcg
ttgcagcccgcgagtgactggaccatcagcctgacgtcgggcagcatcgtgagcagcggg
agcaacgacatggtgttttcaagcgacgccagcggcgtcatcaatttcgccgatggctcg
aagatcgattttgtcgaaatcgaacgcgtgcagtggtaa
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