Bradyrhizobium roseum: QUH67_04565
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Entry
QUH67_04565 CDS
T09605
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bros
Bradyrhizobium roseum
Pathway
bros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QUH67_04565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bros03019
]
QUH67_04565
Enzymes [BR:
bros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QUH67_04565
Messenger RNA biogenesis [BR:
bros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QUH67_04565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HEM4
SUa-2TM
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
WKA29474
LinkDB
All DBs
Position
complement(999602..1001074)
Genome browser
AA seq
490 aa
AA seq
DB search
MTSFQDFGLAEPISRALKEENYHTPTPIQAQTIPLAITGRDIVGIAQTGTGKTASFALPI
LHRILENRIRPQPKTCRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVR
SLMQGVEVLVATPGRLLDLVQSNGLKLNQVEFLVLDEADRMLDMGFINDIRKIVAKLPIK
RQTLFFSATMPKDIAELAEAMLRDPARVAVTPVASTVDRITQRIIQVDFSAKSGVLAQLL
KQEPVDRALIFTRTKHGADKVVKTLEKAGIPANAIHGNKSQNHRERVLAAFRTGEIRTLV
ATDIAARGIDVDGISHVVNFDLPNIPESYVHRIGRTARAGAEGVAISLVAGAEEMGYLRD
IERLIRITLPREDRRTPGSRDAAPAASQRPAQKNRGGRSAPRAHAARTQDSRGHESRGHE
AAPGSKGPRRPRRGGGNSAAPQPNRHDQPRPAQQAGKSQGGKSEGIQGVAFLHRESRPNT
QPNRTHRPQR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
ttgacctcctttcaggatttcggcctggccgaacccatttcccgtgctctcaaggaagaa
aactaccatacccccacgccgatccaggcccagaccatcccgctcgccatcaccggccgc
gacatcgtcggcatcgcccagaccggcaccggcaaaaccgcgtcgttcgcgctgccaatc
ctgcatcgtattctggaaaaccggatccggccgcagcccaagacctgccgcgtgctggtg
ctgtcgccgacccgcgaattgtcaggccagatcctcgacagcttcaacgcctatggccgc
catatccgcctaagttcgaccctggcgatcggcggcgtaccgatgggccgccaggtccgc
tcgctgatgcagggtgtcgaggtcctggtcgcgacccccggccgcctgctcgatctcgtc
cagagcaacggcctgaagctcaaccaggtcgaattcctggtgctcgacgaagccgaccgc
atgctcgacatgggcttcatcaacgacatccgcaaaatcgtcgccaagctgccgatcaag
cgccagaccctgttcttctcagccaccatgccgaaggacatcgccgaactcgccgaagcc
atgctgcgcgaccccgcccgcgtggcggtgacgccggtggcctcgaccgtcgatcgcatc
acgcagcgcattatccaggtggacttctcggccaaatcgggcgtgctggcgcagcttctg
aagcaggaaccggtcgaccgcgcgctgatctttacccgcacaaagcacggcgccgacaag
gtggtgaagacgctggagaaggcaggcatccccgccaacgccattcacggcaacaagtcg
cagaaccaccgcgagcgcgtgctcgccgcgttccgcaccggcgagatccgcaccctggtc
gccaccgacattgccgcccgcggcatcgacgtcgacggcatcagccatgtggtgaatttc
gatctgccgaacattccggaatcctatgtccaccgcatcggccgcaccgcgcgcgccggc
gccgaaggcgtggcgatctcgctggtcgcgggcgctgaagagatgggctatctgcgcgac
attgagcggttgatccgcatcaccctgccgcgggaagaccgccgcacgccgggcagccgc
gacgccgcgccggctgcttcgcagcgccccgcgcaaaagaatcgtggcggacgctccgcc
ccgcgcgcccacgccgcccgcacacaggactcccggggtcacgaatcccggggacatgaa
gcggcgccgggctcaaaaggccctcgccgtccccgccgaggtggtggtaatagtgccgcg
ccgcagccgaaccggcacgaccagccgcgtccggcgcaacaggccggcaagagccaaggc
gggaaaagtgagggcattcagggcgtcgccttcttgcatcgcgagagccgtccgaatact
caacccaaccgtacccaccgaccgcagcgctag
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