Bradyrhizobium roseum: QUH67_06150
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Entry
QUH67_06150 CDS
T09605
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bros
Bradyrhizobium roseum
Pathway
bros02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bros00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QUH67_06150 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bros03021
]
QUH67_06150 (rpoD)
Transcription machinery [BR:
bros03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QUH67_06150 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
FAM186A-B_N
Motif
Other DBs
NCBI-ProteinID:
WKA29759
LinkDB
All DBs
Position
1306309..1308429
Genome browser
AA seq
706 aa
AA seq
DB search
MATKAKTLQVKDKEKDDKAADAPEKDSADAPSPLLDLSDAAVKKMIKQAKKRGFVTFDQL
NEVLPSDTTSPEQIEDIMSMLSDMGINVSEAEEADSDEEKEDDADDTDNELVEVTQKAVT
EVKKSEPGERTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQA
IIIWRDELNEGKIFLRDIIDLEATYAGPDAKNNMNPALIAGPGGEGAPAANGEAAPAHVA
PPAAPPAPTPFRAAPAAAPGGDTVEKDPAESAADGDMDDDEFENQMSLAAIEAELKPKVV
ETFDKIASEYKKLRRLQEQDIANQLQSESLSPSQERKYKKLKDEIIVEVKSLRLNQARID
SLVEQLYDINKKLVSFEGRLLRLGDSHGVAREDFLRNYQGSELDPRWLNRVSKLSAKGWK
NFVHHEKDRIKELRGEIQQLAALTGLEIGEFRKIVHGVQKGEREARQAKKEMVEANLRLV
ISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQA
RTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLKIAKEPLSL
ETPVGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRVLASLTPREERVLRMRFGIGM
NTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaggcaaagacgctgcaggttaaagacaaggaaaaagacgacaaggcagcg
gacgcccctgagaaggattcggccgacgcgccgtcgccgttgctcgatctttccgatgcc
gcggtcaagaagatgatcaagcaggccaagaagcgcggcttcgtgaccttcgatcagctc
aacgaagtgctgccctccgacaccacctcgcccgaacagatcgaggacatcatgtcgatg
ctctccgacatgggcatcaacgtctccgaggccgaagaggccgacagcgacgaggaaaag
gaagacgacgccgacgacaccgacaacgagcttgtcgaggtcacgcagaaggccgtcacc
gaagtcaagaagtccgagcccggcgagcgcaccgacgatcccgtccgcatgtatctgcgc
gaaatgggcacggtggaattgctgtcgcgcgaaggcgaaatcgcgattgccaagcgcatc
gaggccggccgcgaggcgatgatcgcgggcctttgcgaaagcccgctgaccttccaggcc
atcatcatctggcgcgatgaactcaacgaaggaaagatcttccttcgcgacatcatcgat
ctcgaagccacctatgccggccccgacgccaagaacaacatgaacccggcgttgatcgcc
ggtcccggtggtgagggagctcccgccgccaatggcgaggctgcgcccgcgcatgtcgcg
cctcccgcggcgccccccgcgccgacaccgttccgcgccgcgcccgcggcggcccccggt
ggcgacaccgtggaaaaggacccggccgagtccgccgccgacggcgacatggacgacgac
gagttcgaaaaccagatgtcgctcgccgccatcgaggccgagctgaagccgaaggtcgtc
gagacgttcgacaagatcgcctccgaatacaagaagctgcgccgcttgcaggaacaggat
atcgccaaccagctgcagagcgagtcgctgtcgccctcgcaggagcgcaaatacaagaag
ctgaaggacgaaatcatcgtcgaggtgaagtcgctgcggctgaaccaggcgcgtatcgat
tcgctcgtcgagcagctctacgacatcaacaagaagctggtctcgttcgagggccgcctg
ctgcgcctcggcgacagccacggcgtcgcgcgcgaagacttcctgcgcaactaccagggc
tcggagctcgatccgcgctggctcaaccgtgtctcgaaactttccgccaagggctggaag
aatttcgttcatcacgagaaggatcgcatcaaggagctgcgcggcgagatccagcagctg
gcggcgctcaccgggcttgagatcggcgaattccgcaagatcgtgcacggcgtgcagaag
ggcgagcgcgaggcacgccaggccaagaaggaaatggtcgaggccaacctgcgcctcgtg
atctcgatcgccaagaagtacaccaaccgcggcctgcagttcctcgacctgatccaggaa
ggcaatatcggcctgatgaaggcggtcgataaattcgaataccgccgcggctacaagttc
tcgacctacgcgacatggtggatccggcaggcgatcacgcgctcgatcgccgaccaggcc
cgcaccatccgcatccccgtgcacatgatcgagaccatcaacaagatcgtgcgcacctct
cgccagatgctcaacgagatcggccgcgagccgaccccggaagagctcgccgaaaagcta
ggcatgccgctggagaaggtccgcaaggtcctgaagatcgccaaagagccgctctcgctc
gaaacccctgtcggtgacgaggaagattcacacctcggcgatttcatcgaggacaagaac
gcgatcctcccgatcgacgcggcgatccagtccaatttgcgcgagaccaccacgcgcgtg
ctggcctcgctcaccccccgcgaagaacgcgtgctgcgcatgcgcttcggcatcggcatg
aatacggatcacacgctggaagaagtcggccagcagttctcggtgacgcgcgaacgtatc
cgccagatcgaggcgaaggcgctgcgcaagctgaagcatccgtcgcgaagccggaagctg
cggagctttttggataactga
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