Bradyrhizobium roseum: QUH67_13920
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Entry
QUH67_13920 CDS
T09605
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bros
Bradyrhizobium roseum
Pathway
bros03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bros00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QUH67_13920 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bros03021
]
QUH67_13920 (rpoC)
03400 DNA repair and recombination proteins [BR:
bros03400
]
QUH67_13920 (rpoC)
Enzymes [BR:
bros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QUH67_13920 (rpoC)
Transcription machinery [BR:
bros03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QUH67_13920 (rpoC)
DNA repair and recombination proteins [BR:
bros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QUH67_13920 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BSH_RND
RPOC_hybrid
RnfC_N
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
WKA31186
LinkDB
All DBs
Position
2952270..2956472
Genome browser
AA seq
1400 aa
AA seq
DB search
MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA
MIGAEAIRELLKGLELEKLEQTLRAEMQETESDIKHKKLAKRLKIVEAFRYSGNKPEWMI
LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKIFGDMAELEHALH
SKVIHLHTKIKYRWEGIDEEGNITKRWIETTAGRVMLGTLLPKNQRISYDIINKLMTKRE
ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHSKWKIVETTRTL
AKDFEQQYNDGLITHGEKYNKVVDAWSKASEEIAKAMMKEISVTKKNAQGADADINSIYM
MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIITQDDCGTKLGIKMRAIVDAGTVVASLASRILGRTT
GEDLRDPATNKVVVKRGTLMEEAHVDAIQQAGIQEVKIRSALTCELVNGICGKCYGRDLA
RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQINEQSFVESNFDGKVTIRNKAI
ARNSEGFLVAMVRNMVVAIVDADGTERATHRIQYGARMHVDEGDAVKRGQRIAEWDPYSR
PVLTEVEGTIGFEDLVEGQSISETLDESTGIAKRVVIDWRASRGGADLRPAIVVKGKDGK
VLKLARGGDARYMLSVDGILSVDVGAKVKAGDILARISTESAKTRDITGGLPRVAELFEA
RKPKDAAIIAEIAGTIRFGRDYKNKRRISIEPMDKTEETREYLIPKGKHIHLQDGDIVEK
GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV
TDQGDTDMISGEQVDKIEFDALNVKAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQ
ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAVKRDKMILDEREKQ
SAAIVPTAPEAEPLALPPAE
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaaattatgaatctcttcaatccgacgaccccggcccaggtcttcgaccag
atccggatctcgattgcgtctccggagaagattctgtcgtggtcctacggtgagatcaag
aagccggagaccatcaactaccgcaccttcaagccggagcgcgacggcctgttctgcgcc
cgcatcttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcggatgaag
tacaagggcatcatctgcgaaaagtgctcggtcgaggtgacgctgtcgcgcgtccgtcgc
gagcgcatgggccatatcgaactggccgcgcccgttgcccatatctggtttttgaagtcg
ctgccgtcgcgcatcggcctgctgctcgacatgacgctgaaggatctcgagcggatcctg
tactttgaatattacgtcgtgctggagcccggcctgaccgcgctcaaggaccgtcagctg
ctgtcggaagacgagtacctgaaggcgcaggacgaatacggccaggattcgttcaccgcc
atgatcggcgccgaggcgatccgcgagctgctcaaggggctggagcttgaaaagctcgag
cagaccctgcgcgcggaaatgcaggagaccgagtctgacatcaagcacaagaagctcgcc
aagcggctgaagatcgtcgaggccttccgctattccggcaacaagccggagtggatgatc
ctgaccgtggtgccggtgattccgccggacctgcgtccgctggtgccgctcgacggcggc
cgtttcgcgacgtccgacctcaacgacctctaccgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatggagctgcgcgcgcccgacatcatcatccgcaacgaaaagcgcatg
ctgcaggaggccgtcgacgcgctgttcgacaacggccgccgtggtcgcgtcatcaccggc
gccaacaagcgtccgttgaagtcgctggccgacatgctcaagggcaagcagggccgcttc
cggcagaacctgctcggcaagcgcgtcgactattcgggccgctcggtgatcgtggtcggt
cccgaactgcgcctgcatcagtgcggcctgccgaagaagatggcgctcgaactgttcaag
ccgttcatctactcgcggctcgacgccaagggcctgtccaccaccgtgaagcaggcgaag
aagctggtcgagaaggagcgtcccgaggtctgggatatcctcgacgaggtgatccgcgag
catccggtgctgctcaaccgcgcgccgacgctgcatcgcctcggcatccaggcgttcgag
ccggtcctgatcgagggcaaggcgatccagctccatccgctggtttgcgccgcgttcaac
gccgacttcgacggcgaccagatggccgtgcacgttccgctgtcgctggaagcgcagctc
gaagcgcgcgtgctgatgatgtcgaccaacaacatcctacatcccgcgaacggccagccg
atcatcgtgccgtcgcaggacatcgtgctcggcctctattacgtgtcgatcatgcgcgaa
ggcctgcccggcgagggcaagatcttcggcgacatggccgagctcgagcatgcgctgcac
tcgaaggtcatccacctccacaccaagatcaagtaccggtgggagggcatcgacgaggaa
ggcaacatcaccaagcgctggatcgagaccaccgcgggccgcgtcatgctcggcacgctg
ctgccgaagaaccagcggatttcgtacgacatcatcaacaagctgatgacgaagcgcgaa
atctccggcgtgatcgaccaggtctaccgtcactgcggtcagaaggagactgtgatcttc
tgcgaccgcatcatggcgctcggcttctacaacgcgttcaaggccggcatctcgttcggc
aaggacgacatggtggtcccgcactcgaagtggaagatcgtcgagaccacccgtacgctg
gcgaaggatttcgagcagcagtacaatgacggcctgatcacccatggcgagaagtacaac
aaggtggtcgacgcctggtcgaaggccagcgaagagatcgcgaaagcgatgatgaaggag
atttccgtcaccaagaagaatgcccagggtgcggatgccgacatcaactcgatctacatg
atggcgcattcgggcgcgcgcggttcgccggcccagatgcgtcagctcgccggcatgcgc
ggcctgatggccaagccgtcgggcgagatcatcgaaacgccgatcatttccaacttcaag
gaaggtctgtcggtgctcgaatacttcaactcgacccacggcgcccgcaagggtctcgcg
gacaccgcgttgaagaccgcgaactccggttacctgacccgccgtctggtcgacgtggcg
caggactgcatcatcacgcaggacgattgcggcaccaagctcggcatcaagatgcgcgcc
atcgtcgatgccggcacggtcgtcgcatcgctggcgtcgcgtatcctcggccgcaccacg
ggcgaggacctgcgcgatcccgcgaccaacaaggtcgtggtcaagcgcggcacgctgatg
gaagaggcgcatgtcgacgccatccagcaggccggcatccaggaggtgaagatccgctcg
gcgctgacctgcgaactggtcaacggcatctgcggcaagtgctacggccgcgatctggcc
cgcggcacgccggtcaaccacggcgaggcggtcggcgtcatcgccgcccagtcgatcggt
gaacccggcacgcagctgacgatgcgtacgttccacatcggcggcgcggcgcagatcaac
gagcagtcgttcgtcgagtcgaatttcgacggcaaggtgacgatcaggaacaaggccatc
gcccgcaacagcgaaggcttcctggtcgcgatggtccgcaacatggtcgttgcgatcgtc
gatgccgacggaaccgagcgtgcgacccaccgcattcagtacggcgcgcgcatgcacgtc
gacgagggcgatgcggtcaagcgtggccaacgcatcgcggaatgggatccgtacagccgt
ccggtgctcaccgaagtcgaaggcaccatcgggttcgaggacctggtcgaaggccagtcg
atctcggaaacgctggacgaatccaccggtatcgccaagcgcgtcgtcatcgactggcgc
gcgtcgcggggcggagcggatctgcgcccggcgatcgtcgtcaagggcaaggacggcaag
gtgctgaagctggcacgtggcggcgatgcccgctacatgctgtcggtcgacggcattctg
tcggtcgacgtcggcgccaaggtcaaggccggcgacatcctggcgcgtatctcgaccgag
agcgccaagacccgcgacatcaccggcggtctgccgcgggtggccgagctgttcgaggcc
cgtaagccaaaggacgcggcgatcatcgcggaaatcgcgggcaccatccgcttcggccgc
gactacaagaacaagcgccgcatctcgatcgagccgatggacaagaccgaagagaccagg
gagtacctgatccccaagggcaagcacatccatctgcaggacggcgacatcgtcgaaaag
ggcgatttcatcgtcgaaggcaatccggcgccgcacgacatcctggcgatcaagggcatc
gaggaactcgctgcctatctggtcaacgaaatccaggaagtctaccggctgcagggcgtg
ctcatcaacgacaagcacatcgaggtgattgtccgtcagatgctgcagaaggtcgaagtc
accgaccagggcgacaccgacatgatctcgggcgagcaggtcgacaagatcgagttcgac
gcgctcaacgtgaaggccaaggaagagggcaagaagcccgccacgggaacgccggttctg
ctcggcatcaccaaggcgagcctgcagacccgctcgttcttctcggcggcctcgttccag
gagacgacccgcgtgctcaccgaagccgctgtcaacggcaaggtggacccgctggaaggc
ctcaaggagaacgtcattgtcggccggctgatcccggcaggcaccggcgcatcgatggcc
aagatccgcgaagtcgcggtcaagcgcgacaagatgatcctcgacgagcgcgagaagcag
tcggcggcgatcgtgccgactgcgccggaagcggagccgctggcgctgccaccggcggag
taa
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integrated database retrieval system
