Bradyrhizobium roseum: QUH67_16610
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Entry
QUH67_16610 CDS
T09605
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bros
Bradyrhizobium roseum
Pathway
bros03030
DNA replication
bros03430
Mismatch repair
bros03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QUH67_16610 (dnaE)
03430 Mismatch repair
QUH67_16610 (dnaE)
03440 Homologous recombination
QUH67_16610 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bros03032
]
QUH67_16610 (dnaE)
03400 DNA repair and recombination proteins [BR:
bros03400
]
QUH67_16610 (dnaE)
Enzymes [BR:
bros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QUH67_16610 (dnaE)
DNA replication proteins [BR:
bros03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QUH67_16610 (dnaE)
DNA repair and recombination proteins [BR:
bros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QUH67_16610 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
T2SSK
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WKA32006
LinkDB
All DBs
Position
3463713..3467222
Genome browser
AA seq
1169 aa
AA seq
DB search
MSSAGFVHLHVHSAYSLLKGSIKIAKLGELAKADRQPALALTDTDNMFGALEFSDKMAGY
GIQPIVGCELAIDFGDQDPNARNALAAAPSRIVLLAAKERGYRSLMRLNSRAFLETPVNQ
APHIKLEWLEGDAEDVIALTGGPDGPISLALHADQAALAADRCERLVSLFGDRLYVELQR
HGIDKERRVESGLIDLAYAKGLPLVATNEPYFATNDDYEAHDALLCIAGGKLIAETDREQ
LTPDHRFKTRAEMAVLFADIPEALASTVEIAERCSFRPKTRKPILPRFTVGAASGSDAVG
EEAAELERQAQEGLARRLRVHGLSPGTTEEDYAKRLAFEINVINRMNYAGYFLIVSDFIK
WAKAHDIPVGPGRGSGAGSLVAYALTITDLDPIRFGLLFERFLNPERVSMPDFDIDFCQD
RRGEVIDYVQQRYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPAA
PVTLAQAIESEPKLQAFRDEDPVVARAFDIAQRLEGLTRHASTHAAGIVIGDRPLSELVP
LYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLRQRNVHVDLPTLPID
DAPSYAMLARGDVVGVFQVESQGMRRALIDMRPDRFEDIIALVALYRPGPMANIPTYCAR
KHGDEEPEYLHPVLEPILKETFGVIIYQEQVMQIAQVMSGYSLGDADLLRRAMGKKIRAE
MEKQRAIFVAGAVKNGVPKGQADTIFELLAKFADYGFNKSHAAAYALVSYHTAYMKAHYP
VEFLAASMTLELNNTDKLSEFRAEAQRLGIKVEAPNINRSAATFEVGENTIYYALAALKG
VGPQAVEQIVEERKKGLFTSLADFAARVNPRAVNKRIIESLAAAGAFDTLESNRARVFAG
ADAILAACQRSHEAATIGQNDMFGNAADAPTIMLPQIEPWLPAEKLRREYDAVGFFLSGH
PLDDYATVLKRLRVQSWAEFSRAVKTGATAGKVAATVVSRMERRTKTGNKMGIMGLSDPT
GHFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGEDVRARVLHAEPLDDAAAKTQKGLR
IFVRDTKPLDSIARRLNMPETTASNGLTKGQPVKPVPAPSGGADGDVSLVIMLDLQTEVE
MKLPGRFKVSPQIAGAIKAVAGVVDVQTL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgccggatttgttcatctccacgttcattcggcctattcgctgctgaaaggc
tcgatcaagatcgccaagctcggcgaactcgccaaggccgatcgccagccggcgctggcg
ctgaccgacaccgacaacatgttcggcgcgctggaattctccgacaagatggcgggctac
gggattcagccgatcgtcggctgcgagctcgccatcgatttcggcgaccaggacccgaac
gcgcgcaatgcgctggccgccgcaccgtcgcgaatcgtgttgctggcggccaaggagcgc
ggctatcgcagcctgatgcggctgaactcgcgggcgtttctggaaacgccggtgaatcaa
gccccacacatcaagctcgaatggctggaaggcgatgccgaggatgtgatcgcactgacc
ggcggccccgacgggccgatctcgctggcgctgcacgccgatcaggccgcgctcgcagcc
gaccgctgcgagcggctggttagcctgttcggagatcgcctctatgtcgaattgcagcgc
cacggcatcgacaaggagcgccgcgtcgaatcgggcctgatcgaccttgcctatgccaaa
gggttgccgctggtcgcgaccaacgagccgtatttcgcgacgaacgacgattacgaggcg
cacgatgcgctgctgtgcatcgccggcggcaagctgatcgccgagaccgatcgcgaacag
ctcacgcccgatcaccgcttcaagacccgcgccgagatggcggtgctgttcgccgacatt
ccggaagcgctggcttccacggtcgagatcgcggagcgctgctcgttccgtccgaagacg
cgcaagccgattttgccgcgcttcacggtgggcgccgcctcaggttcggacgcggtgggt
gaggaggccgcagaactcgagcgtcaggcccaggaggggctcgcgcggcgcctgcgggtg
catggcctgtcgcccggcaccacggaggaagattacgcaaaacgtctcgccttcgagatc
aacgtcatcaaccgcatgaactatgcgggctacttcctgatcgtgtccgacttcatcaaa
tgggccaaggcgcatgacattcccgtcggtccgggccgcggctccggcgccggctcactg
gtcgcctatgcgctgaccatcaccgatctcgatccgatcaggttcggcctgctgttcgag
cgcttcctcaatcccgagcgcgtctcgatgccggacttcgacatcgacttctgccaggac
cgccgcggtgaggtgatcgactacgtgcagcagcgctacggccgcgaccaggtggcgcag
atcatcacgttcggtacgttgcaggcgcgcggcgtgttgcgcgacgtcggccgcgtgctg
cagatgccctatgggcaggtcgacaagctgacaaagctggtgccgcagaatccggcagca
cccgtgacgctggcgcaggcgatcgagagcgagccgaaactgcaggcgttccgcgacgag
gacccggtggtggcgcgcgccttcgacatcgcccagcgcctcgaaggcctgacgcgccac
gcctcgacccacgccgccggcatcgtgatcggcgaccggccgctgagcgaactggtgccg
ctctatcgcgatcccaaatccgacatgccggtgacccagttcaacatgaaatgggtcgag
ccggcgggactggtcaagttcgacttcctcggtctcaagacgctgacggtgctcgatgtc
gcggtgaaactgctccggcaacgcaacgtccatgtcgacctgccgacgctgccgatcgac
gacgcgccgagttatgcgatgctggcgcggggcgacgtggtcggcgtgttccaggtggaa
agccagggcatgcgccgcgcgctgatcgacatgcggccggaccgtttcgaggacatcatc
gcgctggtggcgctgtatcgcccgggcccgatggccaacatcccgacctattgcgcgcgc
aagcatggcgacgaggagccggaatatctgcatcccgtgctggagccgatcctgaaagag
accttcggcgtcatcatctaccaggaacaggtgatgcagatcgcgcaggtgatgtcgggc
tattcgctcggcgacgccgacctgttgcgccgcgcgatgggcaagaagatccgcgccgag
atggagaagcagcgcgcgatcttcgtcgccggcgcggtcaagaacggcgtgccgaagggg
caggccgacacgatcttcgaactgctggccaagttcgccgactacggtttcaacaagagc
cacgccgccgcctatgcgctggtgtcctaccacaccgcctacatgaaggcgcattacccg
gtggagtttctggcggcgtcgatgacgctcgaactcaacaacaccgacaagctgtccgaa
tttcgcgccgaggcgcagcggctcggcatcaaggtcgaggcgccgaacatcaaccgttcc
gccgccaccttcgaggtcggcgagaatacgatctattacgcgctggccgcgctgaaaggc
gtcggcccgcaggcggtcgagcagatcgtcgaggagcgcaagaagggtctcttcacctcg
ctggcggactttgccgcccgggtcaatccgcgcgcggtcaacaagcgcatcatcgaaagc
ctcgccgcggccggcgccttcgacacgctggaatccaaccgcgcccgtgtctttgccggc
gcggacgccattctggccgcctgccagcgcagccacgaggcggcgacgatcggccagaac
gacatgttcggcaacgccgccgacgcgccgaccatcatgctgccgcagatcgagccgtgg
ctgccggccgaaaagctccgccgcgaatacgatgccgtggggttcttcctgtccggccat
ccgctcgacgattacgccaccgtgctgaagcggctgcgggtgcagagctgggcggaattt
tcccgcgccgtcaaaaccggcgcgaccgcgggcaaggtcgcggccacggtggtgtcgcgg
atggagcgccgcaccaagaccggcaacaagatgggcatcatggggctgtccgaccccacc
ggccatttcgaggccgtgctgttctccgaagggctggcgcaataccgcgacgtgctggag
ccgggggctgccgtgttgctgcagctcggcgccgagctgcagggcgaggacgtgcgggcg
cgcgtgctgcatgccgaaccgctcgatgacgccgcggcgaagacgcagaagggcctgcgg
attttcgttcgcgacaccaagccgctggattcgatcgcgcgccggctcaacatgccggag
accacagcttcgaatggcttgacgaaaggccagccggtcaagcccgtgcccgcgccttcg
ggcggcgccgatggcgacgtctcgctcgtcatcatgctcgacctgcagaccgaggtggag
atgaagctgccgggacgcttcaaggtctcgccgcaaatcgcgggcgcgatcaaggcggtg
gcgggtgtggtggacgtgcagacgttgtag
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