Bradyrhizobium roseum: QUH67_18885
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Entry
QUH67_18885 CDS
T09605
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bros
Bradyrhizobium roseum
Pathway
bros03410
Base excision repair
bros03430
Mismatch repair
bros03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QUH67_18885 (recJ)
03430 Mismatch repair
QUH67_18885 (recJ)
03440 Homologous recombination
QUH67_18885 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bros03400
]
QUH67_18885 (recJ)
DNA repair and recombination proteins [BR:
bros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QUH67_18885 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QUH67_18885 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QUH67_18885 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
WKA25696
LinkDB
All DBs
Position
complement(3919785..3921626)
Genome browser
AA seq
613 aa
AA seq
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MTLPASAIPVEQPPAFLGVSRSATGKLWRDRLDARGAARALAITQRYQLPEMLARVLAGR
DVGIDEVEDFLDPTIRKLMPDPYTVTAMETAAKRMAEAAVRGEKVAIFGDYDVDGATSAA
LLAWHLRHCGLDPLIHIPDRIFEGYGPNVDAVRGLAAKGATLLVTVDCGTTSLEPLAEAR
KLGMSVVVIDHHQTGDELPEVDALVNPNRPDDLSGLGHLAAVGLVLITLVAVNRELRGRG
FWNPERPEPDLLGMLHHVALGTVADVAPLTGLNRAFVAKGLIAMRRRDHVGHTALMDVAR
LNGPPEAWHLGFMLGPRINAGGRIGRADLGVRLLLEGDVSEAARIAAELDRLNSERRLIE
QAAEAQAEAEALASLGLEDKGAVIVTAAEGWHPGIVGLVASRLKEKFSRPAFAIALEPGG
IGTGSGRSISGVDLGKAVRQAVKEKLLMKGGGHAMAAGVTLRKEKLAEFRAFMESALAAD
VANSRHEHELFIDGAVSARSVTVAFATMLNRAGPFGAGNPEPVIALPAHQLVYADEVGQA
HLRLRFKSGDGAIVNGIAFRALGQKLGDALTQNRGQPLHVAGSLAVDRFQGSERVQLRVT
DVAVPDPGPAVIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttcccgcatccgcaattcccgttgaacagccgccggcatttcttggcgtgtcg
cgttcggcgaccggcaaattgtggcgcgaccggctcgacgcgcggggcgcggcgcgggcg
ctggcgatcacgcagcgctaccagttgccggagatgctggcgcgcgtgctggcgggccgc
gatgtcgggattgacgaagtcgaggacttcctcgacccgaccatccgcaagctgatgccc
gacccctacaccgtgacggcgatggagacggcggccaagcgcatggccgaagcggccgtg
cgcggcgagaaggtcgcgatcttcggcgattacgacgtcgatggcgccacatcggctgcg
ctgctggcgtggcacctgcgccattgcgggctcgatccgctgatccacattcccgaccgc
atctttgagggctatggccccaatgtcgacgcggtgcgcggcctcgcggccaaaggtgcg
acgctgctcgtcaccgtcgattgcggcaccaccagcctcgagccgctggcggaagcgcgc
aagctcggcatgtcggtcgtcgtcatcgaccatcatcagaccggcgacgaattgcccgag
gtcgatgcgctggtgaacccgaaccggccggatgatctttccggcctcggccatctcgct
gccgtcggcctggtgctgatcacgctggtggcggtgaaccgcgaattgcgcggccgcggc
ttctggaatccggagcggccggagccggatcttttgggcatgctgcaccatgtggcgctc
ggcaccgtcgccgacgtcgcgccgctgacggggctcaatcgcgccttcgtcgccaagggg
ctgatcgcgatgcgccgccgcgaccatgtcggccataccgcgctgatggacgtggcgcgg
ctcaacggcccgcccgaagcctggcacctcggcttcatgctggggccgcgcatcaatgcg
ggcggccggatcgggcgcgccgatctgggcgtgcggctgctgctggaaggcgacgtctcg
gaagccgcgcggatcgccgccgaactcgatcgcctcaacagcgagcgccgcctcatcgag
caggcggcggaagcgcaggccgaggccgaagcgctggcgtcgctcgggctcgaggacaag
ggtgcggtcatcgtcaccgccgccgagggctggcatcccggcatcgtcggcctcgtcgcc
tcgcggctgaaggagaagttttcgcggccggcctttgcgatcgcgctggagccgggcggc
atcggcaccggctcgggccgctcgatctcgggcgtcgatctcggcaaggcggtgcggcag
gcggtgaaggaaaaactgctgatgaagggcggcggccacgccatggccgcgggcgtcacg
ctgcgcaaggagaagcttgcggagtttcgcgccttcatggaaagcgcgctggccgctgat
gtcgccaattcccgtcacgagcacgagctgttcatcgacggcgcggtgagcgcgcgcagc
gtgaccgtggcgttcgcgacgatgctgaaccgcgccgggccgttcggcgccggcaatccg
gagcccgtgatcgcgttgccggcgcaccaactcgtctatgccgacgaagtgggacaagcg
catctgcgcctgcgcttcaagtccggcgacggcgccatcgtcaacggcatcgcgtttcgc
gcgctcgggcaaaagctcggcgacgcgctgacgcagaatcgtggccagccgctgcacgtg
gcgggctcgctcgcggtcgatcgctttcagggttcggaacgcgtacagttgcgtgtgact
gacgtcgcggtgccggatccgggaccggccgtgataagataa
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