Bradyrhizobium roseum: QUH67_22285
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Entry
QUH67_22285 CDS
T09605
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bros
Bradyrhizobium roseum
Pathway
bros00300
Lysine biosynthesis
bros00470
D-Amino acid metabolism
bros01100
Metabolic pathways
bros01110
Biosynthesis of secondary metabolites
bros01120
Microbial metabolism in diverse environments
bros01230
Biosynthesis of amino acids
Module
bros_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bros00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QUH67_22285
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QUH67_22285
Enzymes [BR:
bros01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QUH67_22285
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Orn_DAP_Arg_deC
YCII
Motif
Other DBs
NCBI-ProteinID:
WKA32066
LinkDB
All DBs
Position
complement(4662165..4663538)
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AA seq
457 aa
AA seq
DB search
MSLSPILRPATADLLADNGALLLDWVARHGSPINLIWPDELEGNVAALRDVLRESGVAHA
LYYGAKVNKSPGLMAAALRAKAGVDVSSVYELRDARQLGAEGAQLVATGPAKTPAFHKEL
IGCNALISVDSPEELEDLIRELPASGPAQPVLLRLRPASQARSRFGMPVAVFRHCLSRIA
GESRLRFDGLHFHLSGYDWESRAQAIDEAAGLIDESRALGFAPRMIDIGGGLPIQYVDQR
AYRAYLEIQKPEDYRTGRVPASFYPYGGELSAAEWLRCLLQARMADGRSIASYFVQEGLL
LALEPGRALADQAAISVFRVSRVKAVGPDAHVVFVEGSSFSACETWFASEFLVDPILVPA
MSPPAAARPIRAYLAGHSCLDDDVLSNRWLTFPFPPRAGDLLVYANTAAYQMDLLENEFH
RHPMPSRLCVIQDAKGQPTLVPDTIGEAQCSARPLAS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgagcctctcgccgattctgcggccggccacggcggatctcctggcagacaacggcgcg
ctgctgctcgattgggtcgcgcggcatgggtctccgattaatctgatctggcccgacgaa
ctcgaggggaatgtcgcggcgctcagagacgtcctgcgggagagcggggtcgcgcatgcg
ctctactatggcgcaaaagtcaacaagtcgcccgggctcatggcggcggctctgcgcgca
aaggcgggcgtcgacgtctccagcgtttatgaattgcgggatgcccggcagctcggcgcc
gagggtgcgcaactggtggcgaccggtccggcgaagacgcccgcattccacaaggagctt
atcggctgcaacgcgctgatatcggtggattcgccggaagaactggaggatttgatccgc
gaattgccggcaagcggtccggctcagccggtgctgctgaggctgcgtccggccagccag
gcgcgaagccgttttggaatgcccgtggcggtcttccggcattgcctgtcgcgtattgcc
ggcgaaagccggctgcgcttcgacgggctgcactttcatctgagcggttacgattgggag
tctcgcgcgcaggcaatcgacgaagccgccggcttgatcgacgaatcccgcgcgctgggt
tttgcgccgcgcatgatcgacatcggcggcgggttgccgatccaatatgtcgatcagcgc
gcctatcgggcctatctcgagatccagaagcccgaggactatcgcaccggaagggtgccg
gcctccttctatccttacggcggagagctctcggcggccgaatggctgcgctgtctgctg
caagcgcggatggccgacggccgcagcatcgcgagctatttcgtccaggaggggctgctg
ttggcgctggagcccgggcgagcgctggccgatcaggccgcgatttctgtcttccgcgtg
tcgcgcgtcaaagcggtcggccctgatgcccatgtcgtcttcgtcgaaggcagcagcttc
agcgcatgcgaaacctggtttgcctctgaattcctggtcgatcccatcctggtgccggcg
atgtcgccgcccgccgccgcaagaccgatccgggcctatctggcaggccatagctgcctg
gacgacgacgtcctgagcaaccgatggctcacctttccgtttcctccgcgcgcgggagac
ttgctggtttatgccaacaccgccgcctaccagatggacctcctcgaaaacgagtttcat
cgccacccgatgccgagccgcctttgcgtgattcaggatgcaaaggggcagccaacactc
gttcccgacacgataggagaggcacaatgctctgcacgaccgttagccagttga
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