Bradyrhizobium roseum: QUH67_24330
Help
Entry
QUH67_24330 CDS
T09605
Name
(GenBank) HAMP domain-containing protein
Organism
bros
Bradyrhizobium roseum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
OKR_DC_1_N
OmpH
RNase_Y_N
YscO-like
ATG14
IFT57
FBF1
SH3_9
FUT8_N_cat
DUF3450
Motif
Other DBs
NCBI-ProteinID:
WKA26691
LinkDB
All DBs
Position
5115527..5121817
Genome browser
AA seq
2096 aa
AA seq
DB search
MSDLSPGASPSVRRAAKPKPATTNGTSDPMQDLLHALQAMRAGDFSVRMTGDHIGIEGKI
ADTFNEIVAANQRMAQQLEHVGQVVGREGMTRQRVKFDLSSGSWADMEGSVNTLIDDLLW
PTREVTRAVAAVAQGNLLQTVQLDVDGRPLGGEFLQSATIVNTMIKQLSVFTSEVTRVAR
EVGTEGKLGGQAQVPEVTGVWKDLTESVNSMANNLTGQVRNIAEVTIAVANGDLSKKITV
DVRGEILQLKEAINTMVDQLRSFASEVTRVAREVGTDGKLGGQAIVPGVAGTWKDLTDSV
NAMCGNLTAQVRNIANVTTAVARGDLSRKITVDVRGEILELKDTINTMVDQLNSFASEVT
RVAREVGTEGKLGGQAQVPGVAGTWKDLTDNVNFMASNLTAQVRNIADVATAIAGGDLSK
KITVNVSGEILQLKETLNTMVDQLNAFAGEVTRVAREVGTEGRLGGQANVLGVAGTWKDL
TESVNSMASNLTAQVRNIAEVTTAVANGDLSKKITVDVRGEILELKDTINTMVDQLNAFA
GEVTRVAREVGTEGKLGGQANVRGVAGTWKDLTDNVNSMAGNLTAQVRNIAEVATAVAKG
DLSKKITVNVSGEILQLKETLNTMVDQLNAFAGEVTRVAREVGTDGKLGGQAEVPGVAGT
WKDLTDSVNSMAGNLTAQVRNIAEVATAIAGGDLSRKITVDVRGEILQLKETLNTMVDQL
NRFAGEVTRVAREVGTEGRLGGQANVPGVAGTWKDLTDNVNSMAGNLTGQVRNIAEVTTA
VAKGDLSKKITVDVKGEILELKNTVNTMVDQLNAFASEVTRVAREVGTEGKLGGQAQVPE
VAGTWKDLTDNVNFMASNLTAQVRNIAEVATAIAGGDLSKKITVDVRGEILLLKDTLNTM
VEQLRSFAAEVTRVAREVGTEGRLGGQAVVPGVGGTWKDLTDNVNLLAANLTTQVRNIAE
VTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFAGEVTRVAREVGTEGKLGGQA
QVPGVAGTWKDLTDTVNFMAANLTEQVRGIVKVVTAVANGDLKQNLTVKSKGEVAALADT
INNMTETLATFADQVTSVAREVGVEGRLGGQANVPGAAGTWKDLTGNVNLLAANLTSQVR
AIAEVATAVTKGDLTRSIQVDARGEVAELKDNINTMIGNLRLTTQVNTEQDWLKTNLAKF
TNMLQGQRDLTTVGRLLLTELAPLINAHMGVIYQTENADSPQLRLLSAYAGDGAKPHPPV
VQFGEGLIGQCAMDKRQRLVADIPADTAPINSALLRIAPKNLVVLPVLFENQVKAVIELS
SISSFTTSQMTFLEQLTDSIGIVLNSIEATMQTEGLLKQSQQLAGELQTQQKELQQTNEQ
LEQKAQQLAERNVEVERKNQEIEQARRALEEKATELSLTSKYKSEFLANMSHELRTPLNS
ILILGQQLTENPDGNLSARQVEFARTIHGAGTDLLNLISDILDLSKIESGTVTVDAEEIL
TSSLLETVGRPFRHEADNRDLSFSIDVDENLARSMVTDSKRLQQVLKNLLSNAFKFTAEG
GVKLNVSAAVGGWSAEHPILNHAPAVVAFEVTDTGIGIPLEKQKLIFEAFQQADAGTSRK
YGGTGLGLAISRELASLLGGEIHLRSVPGKGSTFVLYLPLKYSGPTVAPRAPAPSAFAQT
PALQVAATQERIIEQLPDDRLSLEPGDTILLIVEDDPHYARVLIDLARDKGFKVLVASRG
DEALELAKQFQPSAVSLDVFLPDMLGWTVLSQLKHNPLTRHIPVQIITLDEDRQHALARG
AFSFVNKPTTTEGVSAALSQIKEYAKPRRKRLLIVEDNAAEQMSITELLGHDDIEIITAD
TGADALSTLRNQPCDCVVLDLRLPDMSGFEVLDRLRSDETLSNVPVVVFTGRELSAEEDA
ELHTMARSIVVKGVESPERLLDETSLFLHRVITELPVAKQRMLEKLNSSDEDLVGKTALL
VDDDARNIFALSSVLERRGMKVLTATTGHEAIALVESNPNIAIVLMDIMMPQMDGYQTIG
VIRQNPSFGRLPIIALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLLAIRMWLHR
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatctttcccccggagcgtcaccctccgttcgccgggccgccaaacccaagccc
gccaccaccaacggcacgtctgacccgatgcaggatctgctgcacgctttgcaggcgatg
cgcgcgggagatttctccgtgcggatgaccggcgatcacatcggcatcgagggcaagatc
gccgatactttcaacgaaatcgtcgccgccaaccagcgtatggcgcaacaactcgagcat
gtcggccaggtcgtcgggcgcgagggcatgacccggcagcgcgtgaagttcgacctgtcg
agcgggtcgtgggccgacatggaaggctccgtcaacacgctgattgatgacctgctgtgg
ccgacccgcgaagtgacgcgcgcggtcgccgccgtggcgcagggcaatctgctgcagacc
gtgcagctcgatgtcgacggccgtccattgggcggcgagtttttgcagtcggccaccatc
gtcaacacgatgatcaagcagctttcggtgttcacctcggaagtgacgcgcgtggcgcgc
gaagtcggcaccgagggcaagctcggcggccaggctcaggtgccggaagtaaccggcgtc
tggaaggacttaaccgagagcgtcaactcgatggccaacaacctcaccggccaggtccgc
aatatcgccgaagtcaccatcgcggtggccaatggcgatttgtcaaagaagatcacggtc
gacgtccgtggcgagatcttgcaactgaaagaagccatcaacacgatggtggaccagctc
cgctccttcgcctccgaagtgacacgcgtggcgcgcgaagtcggcaccgacggcaagctc
ggcggccaggccatcgtccccggcgtcgccggcacctggaaggatctcaccgattccgtc
aacgcgatgtgcggcaatcttaccgcccaggtacgcaacatcgccaacgtgaccacggcg
gtcgcccgcggcgacctttcgcgcaagatcacggtggacgtccgcggcgaaatcctcgag
ctgaaggacaccatcaacaccatggtggaccagctcaactcgttcgcctccgaagtgacg
cgcgtcgcccgcgaagtcggcaccgagggcaagctcggcggccaggcccaggtgccgggt
gtggccggcacctggaaagatctcaccgacaacgtcaacttcatggcctccaacctgacg
gcgcaggtccgcaacatcgccgacgtcgccaccgcgatcgccggcggcgacctttccaaa
aagatcacagtgaacgtatcgggcgaaatccttcagctgaaggaaacgcttaacacgatg
gtcgaccagctcaacgcctttgccggcgaagtcacgcgcgtcgcgcgcgaggtcggcacg
gaaggacgactgggaggtcaggccaacgtgctcggcgtcgccggcacctggaaggatctc
accgaaagcgtgaactcgatggcgtccaacctgacagcgcaggtccgcaacatcgccgag
gtgaccaccgccgtcgccaatggcgacctctcgaagaagatcactgtggacgtgcgcggc
gaaatcctggagctgaaggacaccatcaacaccatggtggaccagctcaacgcctttgcc
ggcgaagtgacccgcgtggcgcgcgaggtcggtaccgagggcaagctcggcggtcaggcc
aatgtgcgcggtgtcgccggcacctggaaggatctcaccgacaacgtcaattcaatggcc
ggcaacctcaccgcccaggtccgcaacatcgccgaagtcgccaccgcggtggccaagggc
gacctgtcgaagaagattacggtgaacgtatcgggcgaaatccttcaattgaaggaaacg
ctgaacacgatggtcgaccagctcaacgcctttgcgggcgaagtcacccgcgtggcgcgc
gaggtcggtaccgacggcaagctcggcggccaggccgaggtgcccggcgtcgccggcacc
tggaaggacctcaccgactccgtgaactcgatggccggcaacctgacggcgcaggtccgc
aacatcgccgaggtcgcaaccgcaattgccggcggcgacctgtcgcgcaagatcaccgtg
gacgtccgcggcgaaatcctgcagctcaaggaaacgctgaacacgatggtcgaccagctc
aaccgcttcgcgggcgaagtgacccgtgtggcgcgcgaggtcggcaccgaagggcggctc
ggcggtcaggccaacgtgcccggcgtcgccggcacctggaaggacctcaccgacaacgtc
aactcgatggccggcaatttgaccggccaggtccgcaacatcgccgaagtcaccacggcg
gtggccaagggcgacctgtcgaagaagatcacggtcgacgtcaagggcgagattctcgaa
ctgaagaacaccgtcaacacgatggtggaccagctcaacgccttcgcctccgaagtcacc
cgcgtggcgcgcgaagtcggcaccgaaggcaagctcggcggccaggcccaggtgccggaa
gtcgccggcacctggaaggacctcaccgacaacgtcaacttcatggcgtccaatttgacc
gcgcaggtccgcaacatcgccgaagtcgccaccgccatcgccggtggcgacctgtcgaag
aagatcacggtcgacgtccgcggcgaaatcctgctgctgaaagacaccctcaatacaatg
gtcgagcagcttcgctcgttcgccgccgaagtgacgcgcgtggcgcgcgaggtcggcacc
gagggacgattgggcggccaggccgtggtgcccggcgtgggcggcacctggaaggatctc
accgacaacgtcaacctcctggccgccaacctgacgacgcaggtccgcaacatcgccgaa
gtgaccaccgcggtggcgcgcggcgacctgtcgcgcaagatcacggtcgacgtgaagggc
gaaatcctcgaactgaagaacaccatcaacacgatggtcgaccagctcaacgcctttgcc
ggcgaagtgacgcgcgtcgcgcgcgaagtcggcaccgagggcaagctcggcggccaggcc
caggtccccggcgtcgccggcacctggaaggacctcaccgacaccgtcaacttcatggcc
gccaacctgaccgagcaggtgcgcggcatcgtcaaggtagtgacggcggtcgccaacggc
gacctcaagcagaacctgaccgtgaaatcgaagggcgaagtcgccgcccttgccgacacc
atcaacaacatgaccgaaacgctggcgaccttcgccgatcaggtcaccagcgtggcccgc
gaagtcggcgtcgaaggccggctcggcggccaggccaacgtgccgggcgcggccggcacc
tggaaggacctcaccggcaacgtcaacctgctcgccgccaacctgacctcgcaggtccgc
gcgatcgccgaggtggccactgcggtgaccaagggcgacctgacacgctcgatccaggtc
gacgcccgcggcgaagtggccgaactcaaggacaacatcaacaccatgatcggcaacctg
cgcctgacgacgcaggtcaataccgaacaggactggctgaagaccaacctcgccaaattc
accaacatgctgcagggccagcgcgacctcacgaccgtcggccggctgctgctgaccgaa
ctggcgcccctgatcaacgcgcacatgggcgtgatctaccagaccgagaatgccgacagc
ccgcagttgcgcctgctctcggcctatgccggcgacggcgccaagccgcatccgccggtc
gtgcaattcggcgaggggctgatcggccagtgcgcgatggacaagcggcagcggctggtg
gctgacattccggccgacacggcgccgatcaattcggcgctgctgcgcatcgccccgaag
aatcttgtcgtgcttccggtgctgttcgaaaaccaggtgaaagccgtgatcgagctttcc
tcgatctcatcgttcacgacatcgcagatgaccttcctcgaacagctcaccgattccata
ggcatcgtgctcaactcgatcgaggcgacgatgcagaccgagggccttctgaaacagtcc
cagcagctcgccggcgaactgcagacgcagcagaaggagctgcagcagaccaacgaacag
ctcgaacagaaggcgcagcagcttgccgagcgcaatgtcgaggtggaacgaaagaaccag
gaaatcgaacaggcccgccgcgcgctcgaggaaaaggcgaccgagctgtcgctgacctcg
aagtacaagtccgaattcctcgccaacatgagccacgagctccgcacgccgctaaacagc
atcctgatcctcggtcagcagctcaccgaaaatccggacggcaatctgtcggcaagacag
gtcgaattcgcccgcaccatccacggcgccggcaccgacctgctcaacctgatcagcgac
atcctcgacctctcgaagatcgaatccggaacggtgacggtcgacgccgaggaaatcctg
acgtcgagcctcttggagaccgtcgggcggccgttccggcacgaggccgacaaccgcgat
ctttcgttcagcatcgacgtcgacgagaacctcgcccgcagcatggtgaccgattccaag
cgcctgcagcaggtgctgaagaacctgctgtcgaacgcgttcaagttcaccgcggaaggc
ggcgtgaagctgaacgtctcggccgccgtcggcggctggagcgccgaacacccgatcctc
aatcacgcgcccgcggtcgtcgccttcgaggtgaccgacaccggcatcggcattcccctg
gaaaagcagaagctgatcttcgaggcgttccagcaggccgacgccggcaccagccgcaaa
tacggcggcaccggccttggccttgccatcagccgcgaacttgcgagcctgctcggcggc
gaaatccacctgcgtagcgtgcccggaaaaggctctaccttcgtcctgtatctgccgctg
aaatattccggccctaccgtggcgccgcgtgctcctgccccgtcggcctttgcgcaaact
ccggcgctgcaggttgcagcgacccaggagcgcatcatcgagcaattgccggacgaccga
ctcagtctcgagccgggcgacaccatccttctgatcgtagaggatgatccgcattacgcg
cgggtgctgatcgaccttgcccgcgacaagggcttcaaggtgctggtcgccagccgcggc
gacgaggcgctcgaactcgccaagcagttccagccatcggcggtttcgctcgacgtgttc
ctgccggacatgctgggctggaccgtgctgagccagctcaagcacaatccgctgacgcgg
cacattccggtgcagatcatcacgctcgacgaagaccgtcagcatgcgttggcccgcggc
gcgttttcctttgtcaacaagccgacgacgaccgagggcgtcagtgcggcgctgtcgcag
atcaaggaatacgccaagccccggcgcaagcgcctgttgatcgtggaggacaatgccgcc
gagcagatgagcatcaccgagctgctcggccatgacgacatcgagatcatcaccgccgac
accggcgccgacgcgttgtcgacgctgcggaaccagccgtgcgactgcgtggtgctggat
ctgcggctgcccgacatgagcggcttcgaggtgctcgaccgactccgcagcgacgaaacg
ctgtcgaacgtacctgtcgtcgtgttcacgggacgggaactttcggccgaggaagacgcg
gaacttcacacgatggcacgcagcatcgtggtgaagggcgtcgagtcgccggaacgcctg
ctcgatgaaacgtcgttgtttctgcaccgtgtgatcacggaattgcctgtcgccaagcag
aggatgctcgaaaagctcaacagttccgatgaagatctggttggcaagaccgcacttctc
gtggacgatgacgcccggaacatctttgcgctgtcgagcgtattagaacggcgcggcatg
aaggtgctgacggcgacgacgggccacgaagccattgcgctggtcgaatccaatccgaat
atcgcaatcgtgctgatggatatcatgatgccgcagatggacggatatcagaccattggc
gtgatcaggcaaaacccgtcgttcggtcgccttccgatcattgcgctgaccgccaaggcg
atgaagggcgaccgcgagaaatgtctcgaagccggtgcttcggactatctcgcaaagccc
gtcaataccgagcagttgctgctcgcgatacgaatgtggctgcaccggtga
DBGET
integrated database retrieval system