KEGG   Bradyrhizobium roseum: QUH67_29730
Entry
QUH67_29730       CDS       T09605                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
bros  Bradyrhizobium roseum
Pathway
bros03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bros00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QUH67_29730 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bros03400]
    QUH67_29730 (uvrB)
DNA repair and recombination proteins [BR:bros03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QUH67_29730 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      QUH67_29730 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H Kinesin SWI2_SNF2 AAA_22 Microtub_bd DUF87
Other DBs
NCBI-ProteinID: WKA27701
LinkDB
Position
6282837..6285860
AA seq 1007 aa
MAKKPDTPKNPGKSQKSKAPNSRASRPDVQPIAPALAELLNPAINRGDAGTGSGTGLQPP
PDNSWDRRAGGEAAAHRARASTKSTDGLPAEPLPDRNTTSNVVARQAPLRPNPQPPGARS
SPQGLEEAPQANYGTSATIPTLDPELARQLGLPTAEDDDEALARPPRNKMEALGVKATAD
ALENLIRDGRPEFKGNDGQVRIWTPHRPPRPEKSEGGVPFVIKSEYEPKGDQPTAIKELV
EGINRNDRTQVLLGVTGSGKTYTMAKVIEATQRPAIILAPNKTLAAQLYGEFKSFFPDNA
VEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRHSATRALLERDDVIIVASVSCI
YGIGSVETYTAMTFALKKGERIDQRQLIADLVALQYKRTQADFTRGTFRVRGDVIDIFPA
HYEDRAWRVNLFGDTVENIEEFDPLTGHKQDELEFIKIYANSHYVTPRPTLVQAIKSIKS
ELKMRLDELHNQGRLLEAQRLEQRTTFDLEMMEATGSCAGIENYSRYLTGRRPGEPPPTL
FEYVPDNALVFADESHVTVPQIGGMFKGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDMM
RPQSVAVSATPSGWELNESGGVFVEQVIRPTGLIDPPVDIRPARTQVDDLVGEVRATAQA
GYRSLITVLTKRMAEDLTEYLHEQGIRVRYMHSDIDTIERIEIIRDLRLGAFDALVGINL
LREGLDIPECALVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADQMTGSMERAI
AETNRRREKQVEYNTEHGITPESVKKSIGDIMNSVYERDHVLVEIGDGGMADDVISIGHN
FEAVLSDLETRMREAAADLNFEEAARLRDEVKRLRATEMAVVDDPTAKQRNVQKQAGAYA
GTKKYGEAANLPVSAMKKKGVQTALKSSRGGGAGSSTSKVHKPHLDEMHGPESLPYRPSG
AKPRKPDLPGGTRIFQPTDSRQSGPEFGPAPRSSGGAPGHRGGWKKR
NT seq 3024 nt   +upstreamnt  +downstreamnt
atggcgaagaaacccgacactcccaaaaatcccggcaaatcccagaaatccaaggccccg
aattccagggcgtcgaggccggacgttcagccgatcgcgccggcgctggctgaactgctc
aaccccgcgatcaaccgcggcgacgccggcaccggctcgggcaccggcctgcagccgccg
ccggacaattcgtgggaccgccgcgccggcggcgaagccgccgcgcaccgtgcccgcgcc
tcgacaaaatcgacggatggcctgccggccgaaccgctgcccgaccgcaacacgacaagt
aacgtcgtcgcccggcaggccccgctgcgccccaatccgcaaccgccgggcgctcgcagc
tccccgcaaggcctcgaggaagccccgcaagccaattacggcacctcggccacgatcccg
acgctcgatccagaactcgcgcgtcagctcggcctgccgacggcggaggacgacgacgag
gcgctggcccggccgccgcgcaacaagatggaggcgctcggcgtcaaggcgacggcggat
gcgctggagaacctgatccgcgacggccgaccggaattcaagggcaacgacggccaggtg
agaatctggacgccgcaccggccgccgcgcccggaaaaatccgagggcggcgtgcccttc
gtgatcaaatccgaatacgagccgaagggcgaccagccgaccgcgatcaaggaactggtc
gagggcatcaaccgcaacgaccgcacccaggtgctgctcggcgtcaccggctcgggcaaa
acctacaccatggccaaggtgatcgaggcgacgcagcgccccgccatcatcctggcgccg
aacaagacgctcgccgcccagctctatggcgagttcaagagttttttccccgacaacgcg
gtggagtattttgtctcctactacgactactaccagcctgaggcctacgtcccgcgaacg
gacacgtacatagaaaaggactcgtcgatcaacgagcagatcgaccgcatgcgccattcg
gcgacgcgcgcgctgctggagcgcgacgacgtcatcatcgtcgcttccgtgtcgtgcatc
tacggtatcggttcggtcgagacctacaccgcgatgacctttgcgctgaagaagggcgaa
cgcatcgaccagcggcagctgatcgccgacctcgtcgccctgcagtacaagcggacccag
gccgacttcacccgcggcacgtttcgcgtacgcggcgacgtcatcgatatcttcccggcg
cactatgaagaccgcgcctggcgcgtgaacctgttcggcgacaccgttgaaaacatcgag
gagttcgatccgctcaccggccacaagcaggacgagctggaattcatcaagatctacgcc
aactcgcactatgtgacgccgcgtccgacgctggtgcaggcgatcaagtcgatcaagagc
gagttgaagatgcggctcgacgagctccacaaccagggccgccttttggaagcgcagcgg
ctggagcagcgcaccaccttcgatctcgaaatgatggaggccacgggaagctgcgccggc
atcgagaactactcgcgctacctcaccggccgccgccccggcgagccgccgccgacactg
ttcgaatacgtgcccgacaacgcgctggtgttcgccgacgaaagccacgtcaccgtgccg
cagatcggcggcatgttcaaaggcgacttccgccgcaaggcaacgctcgccgaatacggt
tttcgtttgccctcctgcatggacaaccgtccgctgcggttcgaggaatgggacatgatg
cgtccgcagtcggtcgcggtctctgcgacgccgagcggctgggagctcaacgaaagcggc
ggcgtgttcgtcgagcaggtgatccgccccaccgggctgatcgatccgccggtcgacatc
cgccccgcccgcacccaggtcgacgacctcgtcggcgaagtccgcgccaccgcgcaggcc
ggctaccgctcgctgatcacggtgctgaccaagcgcatggcggaagacctcaccgaatac
ctgcacgagcagggcattcgcgtgcgctacatgcattcggatatcgacaccatcgaacgc
atcgagatcatccgcgaccttcgattgggcgcgttcgacgcgctggtcggcatcaacctg
ttgcgcgaaggcctcgacattcccgaatgcgcgctggttgcgatcctcgacgccgacaag
gaaggttttttgcgcagcgagacctcgctgatccagaccatcggccgcgccgcgcgcaac
gtcgacggcaaggtgatcctctacgccgaccagatgaccggctcgatggaacgcgccatc
gccgaaaccaaccgccgccgcgagaagcaggtcgagtacaacaccgagcacggcatcacg
ccggagagcgtgaagaagtcgatcggcgacatcatgaacagcgtctacgagcgcgaccac
gtgctggtcgagatcggcgatggcggcatggccgacgatgtcatctccatcgggcacaat
ttcgaggcggttttgtccgacctcgaaacccgcatgcgcgaagctgccgccgatttgaac
ttcgaggaagccgccaggttgcgcgacgaagtcaaacgcctgcgcgccacagaaatggcc
gtggtcgacgatcccaccgccaaacagcgcaacgtacagaagcaggccggcgcctacgcc
ggaacgaagaagtacggcgaggccgccaaccttcccgtcagcgcgatgaagaagaaaggc
gtgcagacggccttaaagtcgagccgtggcggcggtgccggcagcagcacctccaaggtc
cacaaaccccaccttgacgaaatgcacggcccggaatccctgccctaccgcccgagcggc
gccaaaccgcgcaagcccgatctccccggcggcaccaggatcttccagcccaccgactcc
cgccagtccggtcccgaattcgggcccgccccgcgctccagcggcggcgcgccgggccat
cgcggcgggtggaagaagcggtga

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