Brassica rapa (field mustard): 103827503
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Entry
103827503 CDS
T03449
Name
(RefSeq) transcription factor MYB88 isoform X1
KO
K09422
transcription factor MYB, plant
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103827503
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
103827503
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
MADF_DNA_bdg
Motif
Other DBs
NCBI-GeneID:
103827503
NCBI-ProteinID:
XP_009101234
UniProt:
M4E7P8
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Position
A06:26354500..26372052
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AA seq
459 aa
AA seq
DB search
MEETRKKKKDDSKKKERHIVTWSQEEDDILRKQITLHGTDNWAIIASNFTDKSTRQCRRR
WYTYLNSDFKRGGWSPEEDTLLCEAQRVFGNRWTEIAKVVSGRTDNAVKNRFTTLCKKRA
KYEAMAKDNSLASCIINSNNKRMLLPDCGISTPPKAETHSPLAKKMRRSDVPDVTVFGSY
GDRSHIKVNSGVNQHLYGNRSHIKVVNQQIRPPFLVLAHNEEKEEEKNQTNSAKESEGED
KGNHEVFLKKDDPKATCLMQQAELLSSLAQKVNADNTDQSMENAWKVLQDFFNKSKENDL
FRYGLPDIDFQLEEFKDLVDDLRSSNEDSQASWRQPDLHDSPASSDYSSGSTTIPHSSGD
QTQQPMSGSQTETQLLPDNEQVDLLSTCHEIVPMSVEEEFNSPVQVTPLFRSLAAGIPSP
QFSESERNFVLKTLGVESPCPSANLSQPPPCKRVLLDSL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaagagacaaggaagaagaagaaggatgattccaaaaagaaggagcgtcatattgtc
acttggtctcaagaggaggatgatatacttcgaaagcaaatcactttacatggcactgac
aattgggcgatcattgcttccaacttcactgataagagcacaaggcagtgtagacgcaga
tggtatacatacttaaactctgatttcaagagaggaggttggtcccctgaagaagatact
cttttgtgtgaggcacaaagagtgtttgggaacagatggactgagattgcaaaagtggtc
tcaggcagaacggataatgcagtgaagaacaggttcacaacactgtgcaagaagagagcc
aagtatgaagccatggctaaagacaatagtcttgcttcttgtatcatcaactctaacaac
aaaagaatgttgctcccagattgtggtatcagtacaccaccgaaagccgaaacccattcc
cctcttgctaaaaagatgaggagaagtgacgttccagatgtaacagtgttcggtagctat
ggggataggtcacacataaaggttaactcgggtgtgaatcagcatctctatgggaataga
tcacatataaaggttgtgaatcagcagataagacctcctttcttagtactagcccacaat
gaggagaaggaggaggagaagaatcaaacaaacagtgccaaggagagtgaaggtgaggat
aaagggaatcatgaggtgtttcttaagaaggatgatccgaaggcaacatgtttgatgcaa
caagctgagcttctcagttcattggcccagaaagttaatgcagataacacagaccaaagc
atggagaatgcctggaaggtcctgcaggatttctttaataaaagcaaagagaatgactta
ttcagatacggactacctgatatcgatttccagcttgaggaatttaaggatcttgttgat
gacttgaggagtagtaacgaagatagccaagcctcttggaggcaaccggatctccatgac
tcacctgcaagctctgactatagctcaggatcaactacaataccacactcttctggtgat
caaacccaacaacccatgtctggttctcagacagaaacacagttactaccagataatgag
caagtggatttactgtcaacttgtcatgagattgtgcccatgtcggttgaggaagagttt
aactcgcctgttcaagtcactccattgttcagatctctggcagcaggcatcccaagccca
cagttctctgaaagtgagaggaactttgtgctaaaaacacttggtgttgagtccccatgt
ccaagtgctaatctttcacaaccacctccttgcaaaagagtccttcttgatagcttgtaa
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