Brassica rapa (field mustard): 103827612
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Entry
103827612 CDS
T03449
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X2
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00520
Amino sugar and nucleotide sugar metabolism
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
103827612
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
brp01003
]
103827612
Enzymes [BR:
brp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
103827612
Glycosyltransferases [BR:
brp01003
]
Polysaccharide
Structural polysaccharide
103827612
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
103827612
NCBI-ProteinID:
XP_009101378
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All DBs
Position
A06:complement(27062266..27065348)
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AA seq
634 aa
AA seq
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MVTFRNLVLFLLLLTVAAPILLYTDPSASFTTTPSSKRDFLDEVTALSFNSDGNHLNLLP
RESPAVVRRDVVGVVYSTQDSDSSRRQETRGDQFSARVLSATDDETQSQTVNPIQQVTDA
ASKVVDKPSDMHVSADTSQAREKMKVQLTEKATEKVDEQEPKDSGAEKERGNVVMPDAQV
RHLKDQLIRAKVYLSLPAAKANPHFVRELRLRVKEVQRVVLDASKDSDLPKNAVEKLKAM
EQTLAKGKQIQDDCSTVVKKLRAMLHSAEEQLRVHKKQTMFLTQLTAKTIPKGLHCLPLR
LTTDYYALNSSEQQFPNQEKLEDNQLYHYALFSDNVLAASVVVNSTVTNAKHPSKHVFHI
VTDRLNYAAMRMWFLSNPPGKATIQVQNVEEFTWLNSSYSPVLKQLSSRSMIDYYFRAHH
TNSDANLKFRNPKYLSILNHLRFYLPEIFPKLSKVLFLDDDIVVQKDLSGLWSVDLKGNV
NGAVETCGESFHRFDRYLNFSNPLISKNFDPRACGWAYGMNVFDLDEWKRQNITEVYHRW
QNLNQDRELWKLGTLPPGLITFWKRTYPLERRWHVLGLGYNPSVNQRDIERAAVVHYNGN
LKPWLEIGLPKYRGIWSKHVDYQHVYLRECNINP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgttccgaaacctcgttctcttcttattgctcctcaccgtcgctgctcctatc
cttctctacaccgatccctccgcctccttcacgaccaccccatcttctaaacgcgatttt
ctcgatgaagtaactgctttgagtttcaattccgatggaaaccatttgaatctgcttcca
agggaatctccggcggtggtgagaagagacgtcgtgggtgtagtctattccacgcaagac
tctgattcttcgcggaggcaagaaacgaggggggaccagttctctgctcgtgttctttcg
gccaccgacgatgaaactcagtctcagactgtcaatcccatccaacaagtcactgatgca
gcttcaaaggtggtggataagccaagtgatatgcacgtttctgctgacacctcccaggct
agggaaaaaatgaaagttcagttgaccgagaaggccactgaaaaggttgatgagcaagag
cctaaagattctggagctgagaaagagagaggaaacgtggtgatgcctgatgctcaggtg
aggcatcttaaagatcagctgattagggcaaaggtttatctttcacttccagctgccaag
gctaatccccattttgtgagagagcttcggctccgtgttaaagaagttcaacgggttgtc
ttagatgcctccaaggattccgatctcccaaagaatgctgtagaaaagttgaaagcgatg
gagcaaacattggccaaaggcaagcagatccaagatgactgttccacggtagtgaagaag
ctacgtgcaatgctccactcggcagaggagcaactacgagtccataagaagcaaaccatg
ttcttgacgcaattgactgccaagacgattccaaagggccttcactgcctccctctacgc
ctcactaccgattactatgctttgaattcgtctgaacaacaattcccgaatcaggagaag
ctagaagataatcagctttatcactatgccctcttctctgataacgttttggctgcatca
gttgttgttaactctaccgttaccaatgccaagcatccctcaaagcatgtcttccacatc
gtcacagacagactcaactatgcggcaatgaggatgtggttcctaagcaacccaccaggc
aaagccaccatccaggttcagaacgttgaagagtttacatggctgaactcaagctacagt
cctgttctcaaacagcttagttctcgatcgatgatagactactacttcagggcacaccat
acaaattcagatgccaacttgaagttccggaatccaaaatacttgtctatccttaatcat
cttcgcttttacttgcctgagatcttcccaaagctcagcaaggtgctcttcttggatgat
gatatagttgtgcagaaggacctgtctggtctttggtcagttgatctgaagggtaatgtc
aacggtgctgttgagacttgtggggaaagcttccatcgctttgaccgatacctgaacttc
tcaaatccactcatctccaagaattttgaccctcgtgcttgtggatgggcgtatggtatg
aatgtttttgaccttgacgaatggaagaggcaaaacatcacagaggtctaccatcgatgg
cagaatctgaatcaagaccgagaattatggaagctagggacactgccgcctggtctcatc
acgttttggaaacgaacatacccgctagaacggagatggcacgtgctgggacttggatac
aacccaagtgtgaaccagagggatattgagagggcagccgtcgtacattataacggtaac
ctcaaaccatggctagagattgggcttccaaaatatcgaggcatctggtcaaagcacgtc
gactatcagcacgtttatctcagagaatgcaacatcaatccttag
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