Brassica rapa (field mustard): 103827619
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Entry
103827619 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: farnesyl pyrophosphate synthase 2
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00900
Terpenoid backbone biosynthesis
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Module
brp_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103827619
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
brp01006
]
103827619
Enzymes [BR:
brp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
103827619
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
103827619
Prenyltransferases [BR:
brp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
103827619
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
103827619
NCBI-ProteinID:
XP_009101386
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All DBs
Position
A6
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AA seq
389 aa
AA seq
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MRLSCCRNMRIAIKAVNLHLHLIRVGSDSLYQSRQLSSSSHHHLLMAKDLKSTFLNVYST
LKSELLHDPSFEFTDESRLWVERMLDYNVPGGKLNRGLSVVDSFKLLKEGKDLSEEEIFL
SCALGWCIEWLQTYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRILK
KHFRGKPFYVDLVDLFNEVEFQTACGQMIDLITTFEGEKDLAKYSLPIHRRIVQYKTAYY
SFYLPVACALLMAGENLENHVDVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDF
KCSWLVVNKALERCSKEQTEILYENYGKPDPSNVAKVKELYKELDLEGVFKEYESKSYEK
LIGVIEAHQSKAIQAVLKSFLAKIYKRQK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagattgagttgttgtaggaatatgagaatagccataaaggctgtgaatttgcattta
catctgatccgtgtgggcagtgacagtctctatcaaagtaggcaactttcatcctcttcc
catcatcatctattaatggcgaaggatctcaagtcaaccttcctcaatgtttattccacc
ctcaagtccgaactcctccatgacccttctttcgaattcaccgatgaatcccgtctctgg
gttgaaaggatgcttgattacaatgtacctggagggaagctcaaccgaggtctctccgtt
gtggacagcttcaagcttttgaaagaaggcaaagacttgtcggaagaagagatttttctc
tcgtgtgctctcggttggtgtatcgaatggcttcaaacttatttccttgtgcttgatgac
attatggataactctgtcacccgccgtgggcaaccttgctggttcagagttcctcaggta
ggtatggttgctatcaacgatgggattctacttcgcaatcatatccacaggattctcaaa
aagcacttccggggaaagcctttctatgttgacctcgttgatctctttaatgaggtagag
tttcagacagcttgtggccagatgatagatctgatcaccacctttgaaggcgaaaaggat
ttggccaagtactcattgccaatccaccggcgtattgtccagtacaaaacggcttattac
tcgttttatctccctgttgcttgtgcgttgctgatggctggcgagaatttggaaaaccat
gttgatgtgaagaatgttcttgttgacatgggaatctacttccaagtgcaggatgactat
ctggattgttttgctgatcccgagactcttggcaagataggaacggatatagaagatttc
aaatgctcctggctggtggttaataaggcactggaacgctgcagcaaagaacaaactgag
atattatacgagaactacggtaaacctgacccatcaaacgttgctaaagtgaaggagctc
tacaaagagcttgaccttgagggagtgttcaaggagtatgagagcaaaagctacgagaag
ctgattggagtgattgaggctcaccaaagtaaagctatccaagcagtgctaaaatccttc
ttggctaagatctacaagagacagaagtag
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