Brassica rapa (field mustard): 103827691
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Entry
103827691 CDS
T03449
Name
(RefSeq) homeobox-leucine zipper protein HDG5 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103827691
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
103827691
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
HALZ
DivIC
Motif
Other DBs
NCBI-GeneID:
103827691
NCBI-ProteinID:
XP_009101472
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Position
A6
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AA seq
821 aa
AA seq
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MLTMGEENVMTTDNRFASPQPPSSSPATIQNPNFNFNPFNSFSSVIPKEEHGMMSMSMLM
MMGDGGVEEMMENGSAGGSFGSGSEQAEDPKSGNEFDVAELQDEEQPPPAKKKRYHRHTN
RQIEEMEALFKQNPHPDDKQRQRLSHELGLKPRQVKFWFQNRRTQMKAQQDRAENVMLRA
DNDNLKAENSHLQAELRCLSCPSCGGPTVLGDIPFNELHIENCRLREELDRLSSIASRYT
GRPMEPSQPMINPPLEVQHHQPSLELDMSVYAGNFQEQPCSDMMLLPPQDTACYLQVQTN
NNSNGNNMVLADEEKVIAMEIAVSCVQELTKMCNTEEPLWIKKKSDKMGGEVLCLNEEEY
KRLFPWPMENHNNKGDFRREASKANAVVIMNSITLVDAFLNADKWSEMFCSIVARAKTVQ
IISSGVSGASGSLLLMYAELQVLSPLVPTREAYFLRYVEQNAENGNWAIVDFPIDQIQPL
SANTPHEYKRKPSGCIIQDMPNGYSQVKWVEHVEVNERHVHEIFAEYVKSGIAFGASRWL
DVLERQCERMASLMARNITDLGVIPSAEGRRNMMRLSQRMMKTFCVNISTSYGQSWTALS
ETTKDTVRITTRKVCEPGQPTGVVLAAVSTIWLPFSHAKVFDLLRHQHHHSLLEVLFSGS
SPHEVAHIANGSHPGNCISLLRINVSSNSWHNVELMLQESCIDNSGSLIVYSSVDVDSIK
HAMNGEDPSGMPLLPLGFSVVPVNYPDQVEGVSVNSIPLPSCLLTVGIQVLASNVPTAKP
NLSTVTTINNHLCSIVNQITSVLSSTIPPAGDDAVAKQEVI
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgttgactatgggagaagaaaacgtgatgactacagacaaccgatttgcttcgccgcag
ccgccttcttcttctccggcaacaatccaaaaccctaattttaatttcaaccctttcaac
tcattttcctccgttattccgaaggaggagcatgggatgatgagcatgagcatgctgatg
atgatgggagatggaggagtggaggaaatgatggaaaacgggtcggccggtgggtcattc
gggtcgggtagtgaacaagcagaagatccaaagtccggaaacgagtttgatgttgctgaa
cttcaagacgaggaacaacctcctcctgctaagaagaaacgttaccacaggcatactaat
cgtcagatcgaagaaatggaagcattgtttaaacaaaaccctcatccagacgacaaacaa
aggcagagattaagtcatgaacttggactcaagcctcgacaagtcaagttttggtttcaa
aataggcgtactcaaatgaaggcacaacaagacagagctgagaatgtgatgttaagggca
gacaacgataatcttaaggcggagaattctcatcttcaggcggagctacggtgcctctcg
tgtccttcttgcggcggccccaccgtactcggcgacattcctttcaacgaactccacatt
gagaattgtcgcctccgtgaagagcttgatcgtctatcctccatagcttcaagatacact
ggccgtccaatggagccatcacagccgatgatcaatcctcctctagaggttcaacatcat
caaccttcactggagcttgacatgagcgtatacgcaggaaactttcaagaacaaccttgt
tcagacatgatgttgcttcctccacaagacactgcttgttacctccaagttcaaactaat
aacaacagcaacggcaacaacatggtacttgctgatgaagaaaaggtcatcgctatggag
attgctgtttcttgtgtccaagaacttactaaaatgtgcaacacagaggagcctttgtgg
attaagaagaaatccgacaagatgggtggcgaggttttgtgtctgaacgaggaagagtac
aagaggttgttcccatggccaatggagaatcataacaacaaaggagattttcgtagagaa
gcttcaaaggcaaacgcagttgtcatcatgaacagcatcacgcttgttgacgcgtttcta
aatgctgataagtggtcggagatgttttgctccattgtagctagggcgaaaacggttcag
attatttcatctggagtgtctggagctagtggttctcttctactgatgtatgcagagtta
caggtactgtctccgttggttccaactcgagaagcttattttctacgctatgtggaacaa
aacgctgaaaacgggaactgggcaatcgtagatttcccgatcgaccagatccagccattg
agtgcaaacactcctcatgagtataagagaaagccttcaggctgcatcattcaagacatg
cctaatggatactcacaagtcaagtgggtcgagcacgtggaagttaacgagaggcacgtg
cacgagatattcgctgagtatgtgaaaagcggaatcgcttttggagctagccgttggctc
gacgtgttggagagacaatgcgagaggatggctagcttaatggctagaaacataactgat
cttggagtaattccatctgccgaagggaggaggaacatgatgaggctatcacagaggatg
atgaaaacattctgtgtgaatataagcacttcgtacggacagtcttggaccgctctgtct
gaaacaaccaaagacactgtgagaatcacgacaaggaaagtgtgtgagcctggtcagcct
actggagttgttcttgctgctgtatcaaccatttggcttccgttctcccacgctaaagta
tttgatcttctccgtcatcaacatcaccactctctgttggaggttttgttcagtggaagt
tcacctcatgaggttgctcatatcgccaatggttcgcatcctggaaactgcatctctctt
cttcgaattaatgtctcgagcaactcatggcataacgtggagctgatgcttcaagaaagc
tgcatagataactccggcagcttaatcgtatactcctccgtggacgtcgactcaattaaa
cacgcgatgaacggcgaagatccttccggtatgccgcttttgcccctaggtttctccgtc
gtccccgtgaactatcccgatcaagtcgagggtgtttccgtcaactcgattcctctgccg
tcgtgtctcctcaccgtcgggattcaggtcttggcgagcaacgtcccaaccgcgaaacca
aacctctccaccgtcacaaccatcaacaaccatctctgctccatcgtcaatcagatcact
tccgtccttagcagcaccattcctcccgccggagacgacgccgtcgccaaacaagaggtc
atctaa
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