Brassica rapa (field mustard): 103827712
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Entry
103827712 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103827712
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103827712
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103827712
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103827712
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103827712
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF4428
CCDC162_middle
Motif
Other DBs
NCBI-GeneID:
103827712
NCBI-ProteinID:
XP_009101495
UniProt:
M4E894
LinkDB
All DBs
Position
A06:27461378..27465164
Genome browser
AA seq
729 aa
AA seq
DB search
MNFPLNSKPFLIDSPCLLLAAIFLLSFLYLTKLRTFFLRIFDLGFLLMAEPSPIIETLDE
SPSDDECQTMPDSSSNEIGSRNRPPRRCMRYFDYSSDDDDDLSNGIFRNRSAVYGDLYNR
RPRRYMQSFDYSSDDDVEMELPKPIDIFSCSSPENKPTGVGAGLNNSGNTCFIASVLQCL
THTVPLLHSLRSYKYHCPCNCGNESFCVLRTLRYHIEHALRSSGCDIMIDRFRDNLNYFS
SDFQINHQEDAHEFLQSFLDKLEKCCLDRSHRDNPPSVSSQDVNIVDHVFGGRLVSKLRC
CNCNSVSETFETSPGWSLEIEDVEDLSSALESFTCVEKLEDQFTCDDCKEKVSKEKQLKF
DKLPLVATFHLKRFKNNGVYMQKINKNVKFPLELDLLPYMSSNENPEVSTKYHLYAMMEH
LGSGTYFGHYSAYVRSAPETWHHFDDEKVRRISEECVLSKSAYMLFYAREGTPCFASAFE
ELKTLFDATPMNFSPKSVLETTTITCSEECVSDLSYQTVSDSSNACNGSVGVSIPCGNSS
DYHCDEAQDEVFHSAESNSGDEYFAFESTKADDSEKPFAATFHQEERPLYPDGNRATTDD
AYVPVLKIQEQVSSPKREAAERAIIGEETFLTKRKMQKRNPFSKRQGKTFQIRREHLQNK
KKREETCITNPFRSIVAAASDPKEKKHAVSYLRSRPCSSRSRLLVAALGVNVKKKKVSNI
RRSSLHRNL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccctctcaattcaaaacccttccttatcgactctccttgtctcctcctcgct
gctatcttcctcctcagcttcctctacctcaccaaacttcgaaccttcttcctcagaata
ttcgatctaggtttcttgttgatggcggaaccctccccgataatcgaaaccctagatgaa
tccccctctgatgacgagtgccagacgatgcctgacagcagcagcaacgagatcggctcg
cgtaatcgtcctccaaggagatgcatgcggtattttgactatagcagcgacgacgacgat
gatctcagcaacggaatcttccgaaacaggagcgctgtctatggagacttgtataatcgc
cgtccaaggagatacatgcagagtttcgactatagtagcgacgatgatgtcgagatggag
ctcccaaaacctattgatatcttctcttgttcgtctcctgagaacaaacctacaggcgtt
ggtgctggattgaataactcagggaacacttgtttcatagcttccgtgttgcagtgcctt
actcatactgttcctcttctccatagccttcgctcttataaatatcattgcccttgcaac
tgcggcaatgagagtttctgtgttctgcgcactctccgatatcatattgagcatgctctg
aggtcttcaggatgtgacataatgattgatcggtttcgtgataaccttaattatttctca
tccgacttccagataaaccaccaagaagacgctcatgagtttcttcagtcgtttctggat
aagctagagaaatgttgtttggatcgtagccatagagataaccctccctctgtctcttct
caagatgttaacattgttgaccatgtctttggtgggcgtctcgttagtaagcttcgttgc
tgcaactgcaattctgtttcagaaacatttgaaacctctcctggatggagtcttgaaatc
gaagatgtggaagatctttctagtgctctagagtcttttacatgtgtggaaaaactcgag
gaccagtttacctgtgatgactgtaaagagaaagtctcaaaggagaagcaacttaagttc
gataagctgcctcttgttgctacgtttcatttgaagaggtttaagaacaatggagtttat
atgcagaagataaacaaaaatgtcaagttccctttggagttggacttgctcccttacatg
agcagtaacgaaaatcctgaagtttccactaaataccatctctatgccatgatggagcat
cttgggagtggtacatattttggtcattactcagcatatgtgagatcagctcctgagaca
tggcatcattttgacgacgaaaaggtcaggagaatcagcgaagaatgtgttctatcaaag
agtgcgtatatgttattctatgcaagagaaggaactccttgtttcgctagtgcgtttgaa
gagctgaagacactatttgatgccactccgatgaatttctcgcccaagtcggtgctagag
actactactattacctgtagcgaggagtgtgtaagcgaccttagttaccagacggtctct
gattccagcaacgcctgtaatggctcggtgggagtttcgatcccgtgtggaaactcatca
gattaccattgtgatgaggcacaagatgaagtgtttcattcggcagagtctaacagtggt
gacgaatattttgcgtttgagtcaacaaaggctgatgactctgagaaaccatttgctgcg
acctttcaccaagaggagcgtcctttgtatccagatggcaacagagctaccaccgatgac
gcgtatgtgcctgtgctcaagattcaagagcaagtctcgtctccaaaacgtgaagctgcc
gagagagctatcattggtgaagaaacttttctgactaagcgcaagatgcaaaagcgaaat
ccgttttcgaaacgccaaggaaaaacatttcagattcgacgtgagcatctgcaaaataag
aagaagagggaagaaacttgtataacaaatccttttagaagcattgttgctgctgcttca
gatcctaaggagaaaaaacatgctgtttcatatctcaggagtaggccttgttcatctcgg
tctcgattgcttgttgcagctttgggtgttaacgtcaagaagaagaaagtctctaacatc
agaagatctagtcttcacaggaatctctga
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