KEGG   Brassica rapa (field mustard): 103827747
Entry
103827747         CDS       T03449                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03420  Nucleotide excision repair
brp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103827747
  09124 Replication and repair
   03420 Nucleotide excision repair
    103827747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103827747
   03400 DNA repair and recombination proteins [BR:brp03400]
    103827747
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103827747
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     103827747
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103827747
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103827747
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103827747
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 NADH_Oxid_Nqo15
Other DBs
NCBI-GeneID: 103827747
NCBI-ProteinID: XP_018508026
LinkDB
Position
A06:27651373..27656640
AA seq 783 aa
MSLPTKRSTCSAASTDSSLSSPPMKKSKNGLHASDKVGFSMDEDPAPSSAANLSRKKATL
PHPTKKLVIKLNKAKPSLPTNFEDTTWENLQSAIRAIFLKQPFPFDLERLYQAVDDLCLH
KLEGKLYERIEKECEEHISSALQSLVGQDTDLSVFLSLVEKCWQDFCDQMLMIRSIALSL
DRKYVIQHTNVRSLWEMGLQLFRKHLSLSPDVEQRTVTALLRMIERERLAEAVNRTLLSH
LLKMFTALGIYAESFEKQFLECTSEFYAAEGMKYMQQYDVPEYLKHVEGRLHEENERCIL
YIDASTRKPLISAVEKQLLERHIHAVLDKGYTPLMDGRRTEDLQRMYTLFSRVSALESLR
QALSSYIRKTGQKIVMDEEKDKDMVQSLLDFKASLDIVWEESFCKNESFGNTIKDSFEHL
INLRQNRPAELIAKFLDEKLRAGNKGTSEEELESTLEKVLVLFRFIQGKDVFEAFYKKDL
AKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTK
LPSGIEMSVHVLTTGYWPTYPHMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHC
VLKAGFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTGIEDKELRRTLQSLACGKV
RVLQKYPKGRDVQDRDEFDFNDTFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQI
DAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYN
YLA
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgtctcttccaaccaaacgctctacttgctccgccgcttctaccgactcttctctctct
tccccgcccatgaagaagtccaaaaacggcctccacgcctccgacaaggttggcttctcc
atggatgaagatccagctccctcctccgccgctaatctctctcgcaagaaggccactctc
cctcaccccactaagaagctcgtcatcaagctcaataaagcgaaaccaagtctacctaca
aactttgaagatactacctgggaaaatctccagtcagctatcagagctatattccttaaa
cagccctttccttttgacctcgagaggctttaccaggctgttgatgacctttgcttgcat
aagctggaagggaagctttacgaacggattgagaaggagtgtgaagaacacatctcttca
gctttacaatctttagttggccaagacactgatctctctgttttcttgtcgctcgttgag
aaatgctggcaagatttctgtgaccagatgttgatgattcgtagtatagccttgtctctg
gataggaagtatgtgatacagcacacaaatgtacgttcgttgtgggagatgggcctgcag
ctttttcggaaacatctttctctgtcccctgatgttgagcagaggacagttactgctctc
ttgagaatgattgaaagggaaaggttggccgaagctgttaataggacactactaagccat
ctcttaaagatgtttactgcactgggaatatatgcggaaagctttgagaagcagttcctt
gaatgcacttctgagttttatgctgctgaaggaatgaaatacatgcagcagtatgacgtt
cccgagtacctgaagcatgtcgagggaaggttgcatgaagagaacgaaagatgcatactg
tatatagatgcatcaaccaggaaaccattgatatcagctgttgaaaagcaacttctcgag
cgtcatatacatgctgtccttgataagggttacacaccgttgatggatgggcgtcgtacc
gaggacctccagaggatgtacaccctgttttctagagtcagtgcacttgagtctctgagg
caggccctaagttcctacattcggaaaactgggcagaagattgttatggatgaagagaaa
gataaagacatggtacaatcactattggacttcaaggcttctcttgacatagtatgggaa
gagagtttttgcaagaatgaatcatttggcaacaccattaaagattcgtttgagcatctg
ataaatcttcgccagaatcgtccagctgaacttattgccaaatttttggacgagaagctc
cgtgctgggaataagggtacttctgaagaagaattggagagtacccttgaaaaagtcttg
gttttgttcagatttattcagggtaaagatgtgttcgaagcattttataaaaaggatctt
gcaaagagacttctgttgggaaagagcgcttcaattgatgctgagaaatcaatgatctct
aagcttaagactgagtgtggtagccagtttacaaacaagctcgaaggaatgttcaaggat
attgaattgtcaaaggaaatcaacgagtcattcaaacagtcgtctcaggccaggacaaaa
ctgccatcaggaattgagatgagtgttcacgttttaacaacagggtactggccaacatat
ccacatatggatgtcaaacttcctcatgaattaaatgtctatcaggatatcttcaaagag
ttttatttgagcaagtacagtggaaggaggttaatgtggcaaaattcattaggtcactgt
gttttgaaggcaggtttctccaaaggtaaaaaggagcttgctgtttccctgtttcaggct
gttgtgttgatgttattcaacgatgcaatgaaacttagctttgaagacattaaagattcc
actggcatagaggacaaggaactgagaaggactctgcagtcgcttgcttgtgggaaagtt
cgtgtcctgcaaaagtatccaaagggaagagacgtacaagacagggatgaatttgatttt
aatgatacctttacagctcctctgtatcgcattaaggtgaatgcaatccagatgaaagag
acagtagaagagaacacgagtacaacagagagagtattccaggaccgacaataccagatt
gatgcagccattgttcgaattatgaagacgagaaaagtcttgagccatactcttctaatc
actgagctcttccagcagctaaagttcccaataaaaccggctgatctgaagaagaggatc
gaaagcctgatcgatcgagagtacttggagagggacaagagcaaccctcagatatacaat
tatcttgcttag

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