Brassica rapa (field mustard): 103827874
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Entry
103827874 CDS
T03449
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103827874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103827874
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Pre-60S particles
RNases
103827874
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Motif
Pfam:
RNase_T
Rv2179c-like
RRM_1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
103827874
NCBI-ProteinID:
XP_009101681
UniProt:
A0A398ANX9
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Position
A01:complement(13217615..13229029)
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AA seq
411 aa
AA seq
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MDHNLATAEKNVLEELVKLVQLRGLRGEHGGWIDFLAVCNQKASTPSNLSMVSRDLLVAF
LTTFKKKEDLKALQCRANSLLVEKLKQETPENYTPEKMLIRLTMKHPEFSSDYSFPSLSN
DWFVSDIGMKSSTVMKSTDMIAVDCEMVLCDDGTEGLVRVGAVDRHLKVILDKYVKPGKP
IVDYRTAITGVTSLDIENATLSVADIQRELQQYLSDGSILVGHSLNKDMRVLKIDHPKVI
DTALVFKFSNARNSRKPSLNDLHKAICGKEVRKEGVSHDCVHDAAASMNIALAFIKKPFD
TTVTPSKEMLEAEKSRLFIHRIPSYVPSEKLNIVLAGEFHSTKFKLDVKPGKTQGGNYCA
VVVFDSTKEADQAFENVNGYKERDSFGLPQKLSTLKLSSGLSASCYVRKMV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggatcataatctagccaccgccgagaagaatgtgttggaagaattggtgaagctagtg
cagcttcgaggtctacgaggagaacacggaggatggattgattttttagctgtttgcaac
caaaaagcttcaacaccatctaacctttccatggtttcccgtgacttgttggtcgctttt
ctcacaaccttcaagaagaaagaagatttgaaggccctgcaatgtcgtgctaatagtctt
ctagttgaaaagttgaagcaggagactcctgaaaattacactcctgagaagatgcttatt
cgattgaccatgaagcatccagaattctcgtcagactattctttcccctcactctccaat
gactggtttgtatccgatattggaatgaagtcgtcgactgtgatgaaatcaactgacatg
atagctgttgattgtgagatggttctttgtgatgatgggactgagggtttggtcagagtc
ggcgctgtcgaccgtcatttaaaggtgattcttgacaaatatgtgaaaccgggcaaacct
attgttgactataggacagccattaccggagtaacttcactagacatcgaaaatgctact
ctatctgtggcagatattcagagagaacttcagcaatatctttctgatggttctattttg
gttggtcacagtctgaataaagacatgagagtgttgaagatagatcatcctaaagtaatt
gatacagcacttgtgttcaaattttcaaatgcaagaaattcaagaaaaccttcacttaat
gaccttcacaaggcgatttgtggtaaggaagtccgaaaggaaggtgtttctcatgattgt
gtacacgacgctgcagcttcaatgaatattgcacttgcttttataaagaaaccatttgac
acaacagttaccccatcaaaggagatgctggaggccgagaaatcaagactctttattcat
agaatcccttcctatgtgccatctgaaaaactgaacattgttctcgctggagaatttcat
tccacaaagtttaaacttgatgttaagccaggaaaaacacaaggaggtaactactgtgca
gttgttgttttcgatagtaccaaagaagctgatcaagctttcgaaaacgttaatggatac
aaagagagggattcatttggtctgccacaaaaactgtccaccttaaagctgagttcggga
ttaagtgcaagttgttatgtccgcaaaatggtgtaa
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