Brassica rapa (field mustard): 103827919
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Entry
103827919 CDS
T03449
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
brp03015
mRNA surveillance pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103827919
09122 Translation
03013 Nucleocytoplasmic transport
103827919
03015 mRNA surveillance pathway
103827919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103827919
03041 Spliceosome [BR:
brp03041
]
103827919
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
103827919
Spliceosome [BR:
brp03041
]
Common components
Common spliceosomal components
Cap binding complex
103827919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
103827919
NCBI-ProteinID:
XP_009101729
UniProt:
A0A397ZBT1
LinkDB
All DBs
Position
A06:28255330..28257442
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AA seq
260 aa
AA seq
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MASLFKEQAKLSAYRDRRFSGTQEEFEEALRTSSTVYIGNVSFYTTEEQIYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYVSGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGGSYPAPAPSNYERR
GGPRGGGGYGQGGSNRHGRGGDFHRKRQRDDDRYGRDNSRRNSDHETRRDSDHDMRPEKN
PRFRESGDSDDDGEDDRKRS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcaaggagcaagcaaagctgtcggcgtatcgagatagaagattctca
gggacacaggaggagttcgaggaggcgttgaggacctcatccaccgtctacattgggaac
gtctctttctacacaactgaagagcagatttacgagctcttctccagagctggagagatt
aaaaagattatcatgggacttgataagaacaccaaaaccccctgtggtttctgtttcgtc
ctgttctactcgagagaggacacagaggatgcagtcaagtatgtaagtggcaccattctt
gatgaccgccctattcgtgtggactttgattggggcttccaagaaggaaggcaatggggt
cgtggtagaagcggtggccaggttcgagacgaataccgtacagattacgatcctgctaga
ggtggttatggaaaattagttcagaaggaactcgaagcacaaagacagctcgtagattac
ggtactggttcactcggaggttcctatcctgcacccgcgccatccaattatgaaagacgt
ggtggacctcgtggtggagggggatatggccaaggaggatcaaatcgccacggaagaggc
ggagattttcatcggaaacgtcaaagggacgatgatcgttatggacgcgacaactcaaga
agaaactcagatcatgagactaggagagactctgatcatgacatgagaccggagaagaac
ccacgattccgtgagagcggtgactcagacgatgacggtgaagatgatcggaagaggtct
taa
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