Brassica rapa (field mustard): 103827949
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Entry
103827949 CDS
T03449
Name
(RefSeq) protein argonaute 10 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103827949
03036 Chromosome and associated proteins [BR:
brp03036
]
103827949
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103827949
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103827949
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
103827949
microRNA pathway
RISC loading complex
103827949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
E1_UFD
Motif
Other DBs
NCBI-GeneID:
103827949
NCBI-ProteinID:
XP_009101760
LinkDB
All DBs
Position
A06:complement(28417222..28422915)
Genome browser
AA seq
1029 aa
AA seq
DB search
MCRLDKDKKRSVFCFIHSFCSGNRKREERMPIRPMKETSETHLLIKPKHLPKAVQNAKAP
PTPTQASSPSPPSKNRSRRRNRGGRKSDQGDVCMRPSSRPRKPPPQNAAPVAAVSGTEIV
AVNHQMQMGVRGSSKNSNFAPRPGFGQLGTKCIVKANHFLADLPTKDLSHYDVTITPEVS
SKSVNRAIIAELVRLYKESELGSRLPAYDGRKSLYTAGELPFTWKEFAVKIFDEDDGIIN
GPRRERSYKVAIKFVARANMHHLGEFLAGKRADGPQEALQILDIVLRELSVKRFCPVGRS
FFSPDIRTPQRLGEGLQSWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEFVAQLLGK
DVLSKPLSDSDRIKIKKGLRGVKVEVTHRANVRRKYRVAGLTTQPTRELMFPVDENATMK
SVIEYFQEMYGFTIQHTHLPCLQVGNQKKASYLPMEACKIVEGQRYTKRLNEKQITALLK
VTCQRPRDRENDILKTVQHNAYDQDPYAKEFGMNISEKLASVEARILPAPWLKYHENGKE
KDCLPQVGQWNMMNKKMINGMTVSRWACVNFSRSVQENVARGFCNELGQMCEVSGMEFNP
EPVIPIYSARPDQVEKALKHVYHTAMNKTKGKELELLLAILPDNNGSLYGDLKRICETEL
GLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGAD
VTHPENGEESSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSG
GMIRDLLISFRKATGQKPLRIIFYRSVSHLLILVIENSQRVLSLVFCFCSDGVSEGQFYQ
VLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKSSTDRSGNILPGTVV
DTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRS
VSVVPPAYYAHLAAFRARFYMEPEIMQDNGSPGKKNTKTTTVGDHGVVGGGVKPLPALKE
NVKRVMFYC
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaggttggataaagacaagaagagatcagttttttgtttcattcattccttttgt
agtggaaaccggaagagagaagaaagaatgccgattaggccaatgaaagaaacctcagag
actcatttactcatcaaacccaagcatctccccaaagccgtgcaaaacgctaaagcccct
cctactccgacccaagcttcttcaccttctcctccgtccaagaaccgtagccggaggaga
aaccgcggtggtcgaaaatcagaccaaggagatgtctgtatgaggcctagctcccgtcct
cgcaaaccgccgcctcagaacgctgctcccgtcgccgccgtctccggcaccgagatagtc
gccgtgaaccatcagatgcaaatgggtgttcgtgggtcgagtaaaaactcaaactttgcg
ccgagacctgggttcggacagcttggaactaaatgcatcgtcaaagctaaccatttcctc
gctgacttaccgaccaaagatctgagtcactacgatgttacaataactcctgaagtgtca
tcaaaaagtgtgaacagagccatcattgctgagttagtgagactatacaaagagtctgaa
ctcgggtcgagacttcctgcttacgacggccggaaaagtctttacaccgccggagagctt
cctttcacttggaaagagttcgctgttaagatcttcgatgaagacgatggtatcatcaat
ggccctagaagggagagatcgtataaggtggctatcaagtttgtggcacgggccaatatg
catcatttaggcgagttcctagctggtaaacgcgcggatggaccgcaagaggcgttgcag
attctcgacattgtactcagggagctgtctgttaagaggttctgtcctgtcggaagatcg
ttcttctcgcctgatattagaacaccgcagcgacttggtgaagggttacagtcatggtgt
gggttttaccagagtattcgacctacacaaatgggtttatctcttaacatcgacatggct
tcagctgcgtttatcgagcctcttcctgtgatagagtttgtagcacagcttctcgggaaa
gatgtcttgtcaaagccattatctgactctgatcgtattaagatcaaaaagggtctcagg
ggagtgaaagtagaggtcactcatagagcaaacgtgagaaggaaataccgtgttgcgggt
ttaacgactcaaccgacaagggagctcatgtttccagttgatgagaacgctacgatgaag
tcggttattgagtattttcaagagatgtatgggttcacgatccagcacacgcatttgccg
tgtcttcaagtgggaaaccagaagaaggcgagctatttgccaatggaggcatgcaaaatc
gtggagggacaacggtacacaaaaaggttgaacgagaagcagattactgctcttttgaaa
gttacatgccagaggccaagggacagagaaaacgacattttaaagacggtgcaacacaac
gcgtatgatcaagatccatatgctaaggagtttggtatgaatataagtgaaaagctagct
tctgttgaagctaggatccttccagctccatggcttaagtatcatgagaatgggaaagaa
aaggattgccttccgcaagtgggtcaatggaatatgatgaataagaagatgatcaatggg
atgacggtgagtagatgggcctgtgttaacttctcacgcagtgttcaagaaaatgttgct
cgtgggttttgtaatgaacttggtcagatgtgtgaagtctctggcatggagtttaatccg
gagcctgtgataccaatatacagcgcgaggcctgatcaagttgagaaagctctaaagcat
gtttatcacactgctatgaacaaaaccaaaggcaaagagttagagcttctcttggccatt
ttacctgataacaacggttcactctacggggatcttaagagaatctgtgaaaccgagctt
ggtttgatatctcagtgttgtctcacaaaacatgtgttcaagattagcaaacagtatctg
gctaatgtatcccttaaaatcaatgttaagatgggaggaaggaacacagttctgttagat
gctataagctgtaggattccactggttagcgacatacctacaattatatttggcgcagac
gtgactcatccagagaacggggaagagtcaagcccttcaatcgctgctgttgttgcttca
caagactggcctgaagtgacaaagtatgctggtttggtttgtgcacaagctcacaggcaa
gaacttatacaagatttgtataaaacatggcaggatcctgtacgtggcactgttagtggc
ggcatgatcagggaccttctgatctcattcaggaaagcaacagggcagaaaccgcttcga
atcatcttttaccggtcggtttctcatttactcattttagtaatagaaaactcgcaacgt
gttctctcattggtattttgcttttgcagtgatggagtaagtgaaggacagttctaccaa
gttttactctacgagttggatgcaattcgtaaggcatgtgcgtcgcttgaaccgaattat
cagccacctgtgacattcatcgtggtacagaagaggcaccacacccgtttgtttgctaat
aatcaccgagacaaaagcagtactgaccgaagcggaaacatcttacctggtacggtagtt
gacactaagatatgtcatcctactgaattcgacttctacctttgtagccacgctggtata
cagggaacaagcaggcctgctcattaccatgttctttgggatgagaacaatttcacagcg
gatggtattcaatctctgactaataatctctgttatacctatgcccgatgcactcgatcg
gtctctgtagttcctccggcgtattatgcacatcttgcagcattccgagcacgtttctac
atggaaccggagatcatgcaagataacggatcgccgggtaaaaagaatacgaagacaaca
actgtaggagatcatggtgttgttggtggcggtgtgaagccgttacctgctttgaaggag
aatgtgaagagagtcatgttttactgctaa
DBGET
integrated database retrieval system
