KEGG   Brassica rapa (field mustard): 103827970
Entry
103827970         CDS       T03449                                 
Name
(RefSeq) DNA repair protein RAD5B isoform X5
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brp03400]
    103827970
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    103827970
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX ResIII DEAD zf-RING_2 zf-C3HC4_2 Prok-RING_4 zf-C3HC4_4 zf-RING_5 RING_XB3-XBAT31 Baculo_IE-1 zf-RING_4 AAA_34 zf-ANAPC11
Other DBs
NCBI-GeneID: 103827970
NCBI-ProteinID: XP_009101780
LinkDB
Position
A06:complement(28519072..28523929)
AA seq 1054 aa
MEMRRTEHEAAVSRSDDCKIVADTPPDESYVVLRTSTGVRISSQLNDESKSVLSDAMPVK
AEEVTGDGSVTLGDDVESESLEFRVKEEPDLDFETQEEAMMIDDTVEKPMVVVEAVSRGS
GNECLDVESDSTHVKMEVREEKPVYVKKVNTQEVDARKAKVEDGDFPVERDWYLVGRSLV
TATSTSKGRRLEDNEVVNFAFPSTLNLKVPNIVRFSTKRCGEIGRLPMEWSNWAVSLLRS
GKVKMLGRCVAAPPFLQMMQDIMLYVSFYIHSSIFTDVSKSTWRIGSSPNIESTLHPLLQ
LFRHLTIKPYQKAEFTPQELDSRKRSLNLENDSDERAALLAIAKRRKGAPLYLEHNNKDE
EDAPDSYMNRVVGAADSYNLEEMEAPSKLTCNLRPYQKQALYWMSESEKGIDVDKAAETL
HPCWEAYRICDERAPSIYVNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILA
RPGRGNPEIEDDLAADVNGDKTKRNESHKALTCVKAKGGTLIVCPMALLSQWKDELETHS
MPDTVSVLSYYGGDRTQDAKAIASHDVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDE
AHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWNKLI
QKPYENGDPRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPTDVKVIECEQSEGERDF
YTALFKRSKVQFDQFVAQGRVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADLDSL
ARRFLDNNPDSVSQRAPSRAYIEEVIQDIRDGNSKECPICLESADDPILTPCAHRMCREC
LLTSWRSTSCGLCPICRTVLKKTELISCPTESIFRVDVVKNWKESSKVSELIKCLEKIRM
SGTGEKSIVFSQWTSFLDLLEIPLRRRGIEFLRFDGKLAQKAREKVLKEFNETKQKTVLL
MSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVCVRRFIVKDTVEER
MQQVQARKQRMIAGALTDEEVRSARLEELKMLFR
NT seq 3165 nt   +upstreamnt  +downstreamnt
atggagatgcggagaaccgaacacgaagcagctgtttcacgttcagacgattgtaagatc
gttgccgatactcctcccgatgaatcctatgtggtcctcaggacatccactggagtccga
atctcttctcaattaaacgatgaatccaagtcggttctttccgatgctatgccggtgaaa
gccgaggaggtaaccggtgacggttctgttactcttggtgatgatgtagaatctgaatct
ttagagttccgtgttaaggaggaacctgatttggattttgagactcaagaagaagcaatg
atgattgatgatactgtagagaagcctatggtggttgttgaagctgtttcaagaggctct
ggcaacgagtgtttggatgtggaatcagattctactcatgtgaagatggaagtgagagaa
gagaagcctgtgtatgtgaagaaggttaatacacaggaggttgatgcaagaaaggcgaaa
gtagaagatggtgatttcccggtggagagagactggtacttggttgggaggtctcttgtc
accgcgacttccactagtaaaggaaggagactcgaagataacgaagttgtgaatttcgca
tttccctctactctcaatttgaaagttccaaacattgttcgcttctctaccaaaagatgt
ggagagattggtaggcttccaatggaatggtcgaactgggctgttagtcttttgagatct
ggtaaagtcaaaatgctaggcagatgtgtagctgcgccaccctttctccaaatgatgcaa
gatattatgctatatgtcagtttctacattcacagctccatattcactgatgttagcaaa
tccacttggcggattggttcttcacctaacatcgagtccacgcttcatcctcttcttcag
cttttcagacacttgacaatcaaaccctaccaaaaggctgagtttactcctcaggaactt
gactctcgcaaacgctccctcaacttggagaatgactcggacgagagagcagcattgttg
gccatagcgaaaagaagaaaaggtgctccactgtatcttgagcacaacaacaaagatgaa
gaagatgctcctgactcatatatgaatcgtgtcgttggcgctgcagattcatataacctg
gaggaaatggaagctccaagtaagctcacctgcaacctgagaccataccagaaacaagca
ctctactggatgtcagagtctgaaaaaggaattgatgttgataaagcagctgaaactctc
catccttgctgggaggcttatcgaatctgtgacgagagggcgccttcaatttatgtgaac
atcttcagcggtgaagcaacaatccagtttccaacagctacacagatggcaagaggcgga
atattggcagatgccatgggacttggaaaaactgtgatgacgattgcactgatacttgca
cggccaggccgaggtaacccagaaattgaagatgacttggcggcagatgttaatggagat
aaaactaagaggaatgagagtcataaagcactaacgtgtgtgaaggccaaaggaggcact
cttattgtttgccccatggcattgctaagccaatggaaggacgagcttgagactcattca
atgcctgacactgtgtctgtgttaagttactacggaggggataggacgcaggacgcaaaa
gctatagcgagtcatgatgtggtcttgacaacttatggtgtcttaacctctgcttacaag
caagatatggcgaacagtattttccacagaattgattggtacaggattgttcttgatgaa
gctcacactatcaaatcatggaaaacacaagctgctaaagctacatttgagttgtcttcc
cactgcagatggtgtctgacagggactcccttacaaaacaagcttgaagatctttacagt
cttctatgcttccttcatgtcgaaccatggtgcaattgggcttggtggaataagttgatt
cagaagccatatgaaaatggtgatccacgaggactaaagctaatcaaggcgattttgagg
ccattgatgctgagaagaacaaaggagacaagggacaaagaaggaagtctaattcttgaa
cttcctccaaccgatgttaaagtcattgaatgtgaacagtctgaaggagaacgtgacttc
tatactgcccttttcaagagatctaaagtccagtttgaccagtttgtggcacaaggaaga
gttcttcacaactatgcaaacatccttgagctcctcctccgtctacgccaatgttgcaac
cacccttttctagttatgagccgggcagattcacaacagtacgctgacttagacagcctc
gcaaggagatttcttgacaacaatcctgactcagtttctcaaagagctccatctcgggcc
tacatcgaagaagttatccaagacatacgtgatggcaacagcaaagagtgcccaatatgt
ctggagtctgcagatgatcccattctcacaccttgtgctcacagaatgtgccgtgaatgt
ctccttactagctggcgctctacttcttgtggtctatgcccaatctgcaggactgtactg
aagaaaactgagctcatctcatgcccaacggagagtatattccgcgttgatgttgtaaag
aactggaaggagtcttcaaaggtctcagagcttataaaatgcttagagaagattcggatg
tctggtacgggagagaagagcattgtgtttagccagtggacttcgtttttggatctcctg
gagattcctttgagaagaagaggaattgagtttcttagattcgatgggaagcttgcacag
aaggcgagagaaaaggtcttaaaggagttcaatgaaaccaaacagaaaacagttctgctt
atgtctctgaaagctggaggagttggtctgaatctgaccgcagcttcaaacgttttctta
atggatccatggtggaatccggcggtggaagagcaagcaatcatgagaattcatcgcata
gggcagaaaagaactgtatgcgtcagaagattcattgtcaaggatacagtagaggaacgg
atgcagcaagttcaggcgaggaagcagcggatgattgctggagctttgactgacgaagaa
gtccggtcggccagacttgaggagcttaaaatgttgttccgatga

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