Brassica rapa (field mustard): 103828199
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Entry
103828199 CDS
T03449
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103828199
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
brp04812
]
103828199
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
103828199
Cytoskeleton proteins [BR:
brp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
103828199
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT_GCN1
HEAT
HEAT_EZ
Vac14_Fab1_bd
TPR_CAND1
TOR1L1_N
HEAT_MROH2B_C
HEAT_GCN1_C
PDS5
Cnd1
HEAT_2
TPR_DNAAF5
HEAT_Maestro
TTI1
Adaptin_N
Tti2
UTP20
TPR_IMB1
Ltn1_1st
INTS1_R4
PIK3R4-like_middle
MMS19_N
RELCH_N
TPR_TTI1_C
MMS19_C
HEAT_DAAF5
Dopey_N
API5
HEAT_Maestro_2
SEN1_N
TPR_TTI1_N
Motif
Other DBs
NCBI-GeneID:
103828199
NCBI-ProteinID:
XP_033130566
LinkDB
All DBs
Position
A7
Genome browser
AA seq
1438 aa
AA seq
DB search
MEEALEMARAKDTKERMAAVERLHQLLEASRKSLSPSEVTSLVDSCLDLLKDSNFRVSQG
ALQALASAAVLAGEHLKLHLNALVPAVVERLGDSKQPVRDAARRLLTTLMEVSSPTIIVE
RAGSYGWLHKSWRVREEFARTVTSAIGLFASTELPLQRVILAPILQMLNDPNQAVREAAI
LCIEEMYMQGGNQFREELQRHHLPSYMVKDINARLERIEPQQRSTDSRSSHHAAVNEVKA
SSVNPKKSSPKAKISTRENSLFGGDPDITEKPIEPINVYSEKELIREFEKIASTLVPEKD
WSMRISAMRRVEGLVAGGATDYSCFRGLLKQLIGPLSTQLSDRRSTIVKQACHLLCLLSK
ELLGDFESCAEIFIPVLFKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIAEAAKHDR
NAVLRARCCEYALLTLEHWPDAPEIQRSVDLYEDLIRCCVADAMSEVRATARMCYRLFAK
TWPDRSRRLFSSFDPVIQRLINEEEGGSHRRHASPSVRERHSQPSFSQTSAPSNLPGYGT
SAIVAMDRSSNLSSGGSLSSGLLLSQSKDLNKGSERSLESVLQSSKQKVSAIESMLRGLH
VSDRQNPAALRSSSLDLGVDPPSSRDPPFRASVPASNTLTNKTTAESMPSINRVSNRSGG
LGLSDIITQIQASKDSGRQSHRSNLLSESHPSFSSLTAKRVSERNERSSFEDNNDARRFM
VGHLDRQQMDNAYRDSTFRDSNASHVPNFQRPLLRKNVGGRLSAGRTRSFDDSQLQVGDM
SNYVDGPASLNEALNDGLNSSSDWCARVAAFNFLQTLLQQGAKGAQEVIQNFEKVMKLFL
RHLDDPHHKVAQAALSTLADLIPSCRKPFESYMERVLPHVFSRLIDPKEVVRQPCSSTLD
IVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNRYAGNPEISGNSGILKLWLA
KLTPLTRDKNTKLKEASITCIISVYNHYDSAGLLNYILSLSVEEQNSLRRSLKQYTPRIE
VDLLNYMQSKKEKLRVKSYDPSDAIGTSSEEGYPGASKKNIFLGRYSGGSVDSDSGRKWS
SSQEPTTVTGGGVGQSVYSGTQEKLYHNFRSGISSASDGLNQKDSDYTFTSAGHNLISRT
SPNGSSDKVENFDSVSPPHLEKNGLDMTNADSLEDRHENEASRELDLSQYMLSSIKVSPT
PESGPSIPQILHMINASDGSPSSSKISGLQQLIEASVANEESVWTKYFNQILTVVLEVVD
DEDLSVREVALSLISEMLKSQKDAMEDSVEIVIEKLLHVSKDSIPKVSSEAEQCLTTVLS
QYDPFRCLSVIVPQLVTEDEKTLVACINCLTKLVGRLSQEELMDQLSSFLPAVFEAFGNQ
SADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQVRLVTIYANRISQARTGAPIDPDT
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctctcgaaatggcgcgagccaaggacaccaaggagcgcatggcggctgtg
gagcgtctccaccagcttctcgaagcttctaggaagagcctgagtccgtcggaagtgacg
tcacttgttgattcctgtttggatctcctcaaggacagcaatttcagagtctctcaaggt
gcgcttcaggcgctcgcttccgccgccgtgctcgccggcgagcatctgaagcttcacttg
aacgcgcttgtccctgccgtagtggagcggcttggagacagcaagcaaccggttagggat
gcggcgaggcgtttgttgacaactctcatggaggtttcatctccgacgattatagtggaa
agagctggttcgtatggttggctgcataagagttggagagttagggaagagtttgcgcga
actgtcacgtcggccattggtctctttgcatctactgagctccctcttcagcgtgttatt
cttgctccgatacttcagatgttaaatgatccgaatcaagcagtcagggaagctgcaatt
ctctgcattgaggagatgtacatgcagggtgggaatcaatttcgggaagagcttcagcgc
caccatcttccatcatatatggtgaaggatattaatgctagactggaacgtattgagcca
cagcagcgttctacagatagccgtagtagccaccatgctgctgttaatgaagttaaggct
tcaagtgtcaatcccaagaagagcagtccaaaggcaaagatttccacaagagagaactcg
ttatttggaggagatcctgacatcactgaaaaacccatcgagccaatcaatgtgtactca
gagaaggagctgatacgagaatttgagaaaattgcttcaacacttgtcccagagaaagac
tggtcaatgcgtatttcagctatgcggagggttgaaggacttgttgcgggaggtgcgact
gattactcttgttttcgaggtctcctgaagcaacttattggtcccttaagtacacagtta
tctgaccgaaggtctaccattgttaagcaggcttgccatctcttgtgtctcttatcaaaa
gagctactgggcgattttgaatcatgcgctgagatttttattccagtgcttttcaagctg
gttgtgatcactgtgcttgttatcgccgaatctgcggataactgcataaaaacgatgctg
cgtaactgcaaagctgctcgtgtacttcctcgcatagctgaggcagcaaaacatgaccgt
aatgcagttttgcgagcaaggtgttgtgaatatgcactgttaacactcgaacattggcct
gatgctccagaaattcagcggtcagttgatttatacgaggatctgattagatgctgtgtt
gcagatgctatgagtgaggtacgggcaacggctagaatgtgctacagactttttgcaaaa
acttggccggatcgttctcgtcgtttattttcctcctttgaccctgtcattcaaaggcta
ataaatgaagaagaaggtggaagtcataggagacatgcctcaccttctgtccgtgagaga
cactcccagccttcattttctcagacgtctgctccatctaatttacctggctatgggaca
tcagccatagtcgctatggatagaagttcaaatttatcctcaggaggatctctttcttct
gggctactcttatcccagtcaaaggatctcaataaaggttctgaacgtagtctagaaagc
gtgttacaatcaagcaagcagaaggtcagtgcaattgaaagtatgctccgaggactgcat
gtatcggatagacagaatccagcagctcttcgttccagtagtttggatctaggagttgac
cctccatcgtctcgtgatcctccattccgtgcttccgttccagcatccaatactctcaca
aataaaacaactgctgaatcaatgcctagtattaacagagtcagtaatcgcagtggtggc
cttggtttgtcagatatcatcacccagatacaagcttcaaaggactcaggaagacaatca
caccgtagcaatttgttgtccgagtctcatcctagcttttcatccttgacagctaaaagg
gtctcagagagaaacgagagaagttcttttgaggacaacaacgatgccaggcggtttatg
gtgggtcatttagacagacagcagatggataacgcttatagagattcaacattcagggat
tcaaacgctagtcatgttcccaatttccagaggccacttttgaggaaaaatgttggggga
agattgtcggcaggcaggacgaggagttttgatgatagccaactccaagttggtgacatg
tcaaattatgttgatggtccagcgtctctgaacgaggcccttaacgatggactgaattca
agttctgattggtgtgccagagttgcagcatttaattttctccaaactttactgcaacaa
ggcgcgaaaggtgctcaagaggtgatccagaattttgagaaagtaatgaaactatttctc
cggcatttggatgatcctcaccacaaggttgcacaagcagcactgtcgacactcgcggat
cttataccatcttgccgaaagccttttgagagctacatggaacgagtcttaccccatgtg
ttttcaaggctaatcgatcctaaagaggtagttagacaaccttgctcgtctaccctggat
attgtcagcaaaacctatagcgtagattcgcttttacctgcgttgcttcgttcactggat
gagcagagatcaccgaaggctaaattagccgtgatcgaatttgccatcaactccttcaac
aggtacgctggcaaccctgaaatttcgggtaatagtggcatcctgaagctttggctggca
aagttgacaccattaacccgcgacaagaataccaagttaaaagaagcttccatcacttgt
atcatatctgtttacaatcactatgattctgctggacttctaaattacattcttagtttg
tcggttgaggagcaaaactccttgagaagatccctcaaacagtatactccccgcatcgag
gtggacctattaaattatatgcagagtaagaaggagaaactgagagtaaagtcttatgac
ccatctgatgccattggaacatcatctgaagaaggatatccaggtgcttccaagaagaac
atattccttggcaggtactctgggggttccgtcgacagtgatagtggtaggaagtggagt
tcttcccaggagccaacaacggtcactggcggtggtgttggtcaaagtgtttacagtgga
actcaggaaaagctgtatcacaacttcagaagcgggataagttctgctagtgatgggttg
aaccaaaaggattctgattacacgtttacttcagctggtcataatttgatatcaagaact
agcccaaatggaagctcagacaaggttgaaaactttgatagcgtatctccaccacattta
gagaaaaatggtctggatatgacaaatgctgattccttggaagatagacatgaaaatgag
gcttctcgcgaattagatttgagtcagtacatgctctcatctattaaggttagcccaaca
ccggaatctggacctagcattcctcagattctacatatgatcaatgcgagtgatggaagc
ccttcttcgagcaagatatctggactccagcaactaattgaagcctctgtagctaacgag
gaatcagtttggaccaagtacttcaatcaaatattgacggtagttcttgaagtggtcgat
gacgaagatttgtcagtcagagaagttgctctttccctgatatctgaaatgctaaagagc
cagaaagatgccatggaagattcggttgagatagtgattgagaagctgcttcatgtctcg
aaggactctattccaaaagtttccagtgaagctgagcaatgtttgaccacagttttatcc
caatacgatcctttcagatgcttaagtgttattgtgccacaattggtaacagaagatgag
aaaactctcgtcgcttgcatcaattgcttaactaagcttgtgggtaggctctcgcaagag
gaattaatggatcaattgtcttcttttttgcctgcggtttttgaagcatttgggaaccaa
agcgcagatgtccgaaagacagtggtgttctgtctagtagacatatatataatgcttggg
aaagcattcttgccgtatttggaaggtctaaacagtacacaggttcgcctagtgaccatc
tacgcaaacaggatctcacaggctagaaccggtgcccctatcgacccagacacctaa
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integrated database retrieval system
