Brassica rapa (field mustard): 103828373
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Entry
103828373 CDS
T03449
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic isoform X2
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03060
Protein export
brp04141
Protein processing in endoplasmic reticulum
brp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
103828373
04141 Protein processing in endoplasmic reticulum
103828373
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103828373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103828373
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
brp02044
]
103828373
Membrane trafficking [BR:
brp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
103828373
Secretion system [BR:
brp02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
103828373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
103828373
NCBI-ProteinID:
XP_009102226
UniProt:
M4FCJ6
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Position
A07:1475224..1478085
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AA seq
551 aa
AA seq
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MITVSQVSSYSSSSSNLASLSRLNPKSCWRLRSSSLYGPSFSIPTKTRNTCCKANSWKNL
GLVINSRSSEVSTFDPLGINPKEASGLSSIWESLLSVLSPSFESSSGSKRDKPSSGRGVA
AAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDQNSLLTT
LDTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRY
ASVGFAIVQAIGQAVYLRPYVNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTS
LLIFTSIISYLPASFGRTAAEALQEGNYTGLATIVVSFLLLVLGIVYVQEAERKIPLNYA
SRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISSLKNVAYGLNPG
GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTALFIKTVLGRI
SVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN
IEFYELDKYDP
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgataacggtaagccaagtttcctcttactcttcttcttcttcaaacctcgcttctctg
tctcgtctcaaccccaaatcatgctggagactccgaagctcttctctgtacggaccaagc
ttctccattccgaccaaaaccaggaacacttgttgtaaagccaattcatggaagaatctc
ggtctggtcatcaactctagaagctctgaggtttcgacatttgatcctttgggcattaat
ccaaaagaagcttctggcctgagtagcatttgggaaagccttctgagtgttttgtctcca
tcatttgaaagctcctctggtagcaaaagagataagccgtcttctggtcgaggcgtggca
gcggctattgaggacagttccattgactttggagatttcttcaaaggcccattacctgga
aagttcctaaagcttctcggcttcttagcactctctcgcctcggaatctacatcccacta
ggtggagtcaaccgagaagcctttgtcggaaacttggatcagaacagcttgttaaccact
ctagacacattctccggtggtggcattggtagactcggcatatgctccctcggtatcgtc
cctttcatcaacgcccagatcgtgtttcagcttcttgctcaagtctaccccaagctgcaa
gaccttcagaagaaagaaggcgaagcgggtaggaaaaagatccttcagtacactcgttat
gcttcggttggattcgctatagtgcaggcgataggacaagcggtttacctccgtccttac
gtgaatgacttcagcactgaatgggttgtttcgtccgtcacgctgctaacgcttggctct
gtcctcactacttatattggagagagaatctctgatctgaagcttggaaacggcacttcg
cttttgatattcacgagtattatctcttacttgcctgcttcatttggtagaacagcggca
gaagctttgcaagaagggaactatactggtctcgctactatagttgtttcattccttctc
ttggtacttggaatcgtctatgttcaggaagcagagaggaagattccgctcaactatgcg
tcgagatacaccagcaaagcaggtgggcttcagaagtctgcttatcttccattcaaggtc
aatagtgctggagtgatgcctatcatattctccacgtcatctcttgctctccctgctact
ctagcgcgattcaccggcatatcttctctgaagaatgttgcttatggtttgaaccccgga
ggttcgttctatcttccaaccaacatacttctcatagctttcttcaactactactacact
ttcctgcaacttgacccagacgatgtgagtgaacaattgaaacgacaaggtgcatccatc
cctcttgtccggcctggtaaaagcactgctctcttcatcaaaaccgttcttggccggata
tctgttcttggatcagcatttctggctgttcttgctgctggtcctgctgtggtggaacag
atcactcacttgacagcattcagaggatttgctggtacttctgttctgattctcgtaggg
tgcgcgacagatactgcaagaaaggttcaagctgagatcatctcgcagaagtacaagaac
attgagttttatgagcttgacaagtatgatccatga
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