KEGG   Brassica rapa (field mustard): 103828541
Entry
103828541         CDS       T03449                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
  KO
K16285  RING/U-box domain-containing protein [EC:2.3.2.27]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103828541
Enzymes [BR:brp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103828541
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103828541
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf_RING_Vps8 zf-ANAPC11 zf-RING_Vps41 Prok-RING_1 zf-RING_16 Trm112p zf_RING_Vps8_fungal zf-C3HC4_4 RINGv zf-Nse FANCL_C zf-RING_4 Prok-RING_4
Other DBs
NCBI-GeneID: 103828541
NCBI-ProteinID: XP_009102398
LinkDB
Position
A07:7752641..7754397
AA seq 161 aa
MGLSSLPGPSEGMLCVILVNTALSISIFKGILRSVLQLIGIRLCPSSAAAAAAASSENQT
SETFDFRVCQPESFLEEFRNRTPTVKFESLCKCKKQADNECSVCLSNFEEDSEINKLKCG
HLFHKTCLEKWIDYWNITCPLCRTPLVVVAADDQLVSSNVW
NT seq 486 nt   +upstreamnt  +downstreamnt
atgggtctatcaagccttcctggtccatcagaaggaatgctatgcgtgatattagttaac
acagcattgtcaatctccatcttcaaaggcattctcaggtcagtgcttcagctaatagga
atccgtctctgtccttcttcagcagcagcagcagcagctgcatcttcagagaatcaaact
tcagagacttttgatttccgggtctgccagcctgagagtttccttgaggaattcaggaac
aggacccccacagtgaagtttgagagcttgtgcaagtgcaagaaacaggcggacaacgag
tgttctgtatgcctgtcgaatttcgaagaggattcagagatcaacaagctaaaatgtggc
catttgtttcacaaaacatgcttggagaaatggatagactactggaacatcacttgccca
ctctgtaggactcctcttgttgttgtcgcagcagacgaccagctggtttcctctaatgtt
tggtga

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