Brassica rapa (field mustard): 103828638
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Entry
103828638 CDS
T03449
Name
(RefSeq) syntaxin-32
KO
K08490
syntaxin 5
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103828638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103828638
Membrane trafficking [BR:
brp04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
103828638
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Use1
Prominin
Syntaxin-5_N
SNaCT13
Syntaxin
PI_PP_I
Motif
Other DBs
NCBI-GeneID:
103828638
NCBI-ProteinID:
XP_009102511
UniProt:
M4DEW4
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All DBs
Position
A07:complement(8706512..8708549)
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AA seq
344 aa
AA seq
DB search
MQARRGQSSYRDRTDEFFGIVETLRRSIAPDAANNVPYGGGGGGRREDPRSAVANQSEFK
KRAAVIGLAINQTSQKLSKLAQLAKRSSVFDDPTREIQELTAVIKQEISSLNSALIDLQA
VRNSHNDERTISRDTTTHSATVVDDLKNRLMDTTKEFKDVLTLRTENMKIHEIRRQRFTS
NPSKESTNPFVRQRPLASKPAATQPAPLPWASSSSSSSSSSQLVPRRQGEAESSPLLQQS
QQQQQQMVPLQDTYMESRAEALHNVESTIHELSNIFTQLATMVSQQGEIAIRIDQNMEDT
LANVEGAQSQLARYLNSISSNRWLMIKIFFVLIAFLMVFLFFVA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaggcgtggccaatcgtcgtatcgagatcggacggacgagttcttcggtatc
gttgaaactctgaggagatcaattgctccggatgcggcgaataatgtgccgtatggcggt
ggtggtgggggaaggagagaggatccgagatccgccgtggcaaatcaatcggagttcaaa
aagcgagctgctgtcatcggtttagctatcaaccagacgtcgcagaagctatcaaagctt
gctcaactggcaaagagatcatcagtttttgatgatcccacacgggagatacaagagttg
acggcggtaatcaaacaagagatctcttctctgaattccgctctgatagaccttcaagct
gtacgcaactcccataatgacgaacgcaccatctctagagacacaactactcactcagca
actgttgttgacgatctcaagaatcgcttgatggacactaccaaagagtttaaggatgtt
cttactttgagaaccgagaacatgaagatccatgaaattcgaaggcaaagattcacgtct
aacccgtcaaaagaatcaacaaacccgtttgttcgccagcgccctttggcttctaagcct
gctgctactcaacctgctccacttccatgggcaagtagctcttcttcatcttcttcatcg
tctcagttagtcccaaggagacagggagaggcagaatcttctccattgttgcagcagagt
caacaacaacaacaacagatggtcccgttgcaagacacttatatggagagccgcgcagaa
gctctacacaacgtagaatcaacaatccatgagctaagcaatatcttcacacaactagct
accatggtttctcagcaaggggagatcgctatcaggatcgatcagaacatggaagataca
ttggcgaatgtggaaggcgcacagagccaattggccaggtatctcaacagtatatcatca
aaccgatggctcatgattaagattttcttcgtactgattgcatttctcatggttttcctc
ttcttcgtggcctaa
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