Brassica rapa (field mustard): 103829049
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Entry
103829049 CDS
T03449
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103829049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103829049
03036 Chromosome and associated proteins [BR:
brp03036
]
103829049
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103829049
Coactivators
SAGA/TFTC/STAGA complex
103829049
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103829049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
103829049
NCBI-ProteinID:
XP_009102956
LinkDB
All DBs
Position
A07:11671146..11676528
Genome browser
AA seq
718 aa
AA seq
DB search
MDPSLLKLLEEDDEDESMHSKEDVDAFQASLIREIEGGNHSWSQQFAAWNNGITRDANTN
KLHILESTQMKEQQQQQQQQHSDRELKPEDESPVQLNHNLPQNHLQPDGLSENPSHVPQA
TDLQSRNNSISMEQPVGSVNLGPTQLQVGELFRLLRPQVDKDRGKQLNTLFYKFKSNEVT
KESFLRQARNIVGERMILWAVRKLQQQGNKGVKVPDGSNHYREPFTSAEDQSLIQSLTED
ISAKKSDTYGSHDNQLHSTSSGTLSSSATVHGLHNSESPVSVNGPAMVHGGPIFPNQNNS
SLPINPAPCRGSVTKDQTMSNDQTVAHVKQKLTDQSFDQVRKPCPVVRQDVSNVPMEQRN
GNPRRSDDDLLKQSSEMVLSAPTTHANFASPSVKTQLDSSTMVNFSAPAATIFPGTIVTT
TQGQKKTLEAQGSSLPPLSKRQKLCETSLAGSGKKFNDVTELSGINLMEEERELLSSLTK
NNSRVFKSFRRVAYEEEGRTILQKAPLQRKLAGIMAKSGIKHIKDDVERCLSLCVEERMR
VLLSKIIRTSKQRTDPEKCRNRICITSDIRKQINEMNQKEKDEQEKKHGGEEELKNDTAK
EDKRSEQVKANKEQAEKRAKAANDAALASVGGDNVFSKWKLMAEARQKPSSETRRNAKKL
SGGQRLGKKNHGSPKVVRSISVKDVIAVVEKEHQMSRSTLLYRLYDSICSYVPTQDKT
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggatccctcccttttgaagctcctcgaagaagatgacgaggatgaatctatgcactcg
aaggaagacgtcgacgcgttccaggcctctctgattcgagaaatcgaaggaggaaaccat
tcttggagtcagcagtttgcagcatggaataatggtattactcgagatgctaataccaat
aagctccatatccttgagagcactcagatgaaagagcaacaacaacaacaacaacaacag
cactcagaccgagaattaaagccagaagatgaatcacccgtacagctcaaccacaacctg
cctcagaaccatctacaaccagatggactctctgagaatccttcccatgttccccaagca
actgacttgcagtctaggaacaactctattagtatggaacaacctgttggctctgtaaat
cttggtccgacacaactacaagtcggtgagttgtttcgtctactgagaccccaagttgac
aaagatagagggaagcagctcaatacactgttttataaattcaagagtaacgaagttaca
aaggaaagtttcttacgacaagcaaggaatattgtaggtgaacgaatgatcttatgggca
gttaggaaactgcaacaacagggaaataagggggtcaaagtgcctgatggctcaaaccat
tacagagagccctttacttctgctgaagaccaatccctgatacaatctttaaccgaagac
atcagtgctaaaaaatctgacacttatggaagtcatgataaccaactacattcaacaagt
tcgggcaccttaagcagttcagctactgtgcacggattacacaattctgagagtccagtt
tctgtgaatggtccagctatggttcatggtggccctatattccccaaccaaaataactca
tccttgcctataaatccggctccttgccgaggatcagtcaccaaggaccagacaatgagc
aatgatcagacagtggcccacgtgaagcagaaattgactgatcaaagctttgatcaggta
cggaagccttgtcctgtggtgcggcaagacgtgtctaatgttccaatggaacagaggaat
ggtaacccaaggaggtcagatgatgacttactgaagcaatcatctgaaatggttttatca
gcacctaccacccatgcaaactttgcctctccttcagtgaaaacacagctggactctagc
acaatggttaatttctctgccccagctgcgaccattttcccaggaactattgttacaacg
acacaaggtcagaaaaaaactctggaggcacaaggttcttcgctaccaccattgagtaag
aggcaaaaactgtgtgaaacttctttagctggaagtggtaaaaagttcaatgatgttacg
gaactcagtggcatcaatcttatggaagaggaaagagaattattatcttctctaactaaa
aataacagtcgtgttttcaaatcatttcgaagagttgcgtatgaggaggaaggaagaacg
attttgcagaaagctccactgcagagaaagctggctggaattatggcaaaaagtggtata
aagcatatcaaggatgatgttgagcggtgcttgtctctgtgtgtggaggaaaggatgcgt
gtattgttgtctaagataatccggacttcaaagcagcggactgatcccgagaagtgtaga
aatcggatttgtatcacatctgatatccggaaacaaatcaacgaaatgaatcagaaggaa
aaagatgaacaggaaaagaaacatggtggagaagaagagcttaagaatgatacagcaaaa
gaagataaacgttcagagcaagtgaaggcaaataaggagcaagccgaaaagagagctaag
gctgcaaatgatgctgcccttgcatccgttggaggagataatgtgttttcaaaatggaaa
cttatggcagaagcacgtcagaaaccttcttcagagacaagaagaaacgccaaaaaactt
tctggtggtcaaagattagggaagaagaaccatggttcaccaaaagtggtccgttcaatc
tctgtgaaggatgtgattgctgttgtggaaaaagagcatcagatgtccagatcgacgcta
ctgtatcgcttatacgatagtatctgctcgtatgttccaacccaagataagacatag
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