Brassica rapa (field mustard): 103829198
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Entry
103829198 CDS
T03449
Name
(RefSeq) vesicle transport v-SNARE 12
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103829198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103829198
Membrane trafficking [BR:
brp04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
103829198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
YqjK
RIFIN
Fusion_gly
FliJ
DUF5741
DUF4332
Motif
Other DBs
NCBI-GeneID:
103829198
NCBI-ProteinID:
XP_009103105
UniProt:
M4D7I6
LinkDB
All DBs
Position
A07:12349598..12351349
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AA seq
222 aa
AA seq
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MSEVFEGYERQYCELSTNLSRKCHSASLLSHGEEKKEKLVEIKSGMDEADVLIRKMDLEA
RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSPDANQSTREELMESGMADVHAVSADQ
SGRLAMSMERLDQSSDRIRESRRLMLETEEVGISVVENLSQQRQTLLHAHSKLQGVDDAI
DKSKKVLTAMSRRMTRNKWIVGSVIVALILAIILIISYKLSH
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtatttgaagggtacgagcgacagtactgcgagctctcaaccaatctctcc
agaaaatgtcattctgcctcgcttctctcccacggagaagagaagaaggagaagcttgtt
gagattaagtctggaatggacgaagctgatgtcttgatccggaaaatggatcttgaggca
agaagtttgcagccgagtgctaaagctgtgtgtctctctaaactaagagagtataaatct
gatttgaaccaactgaagaaagaattcaaacgagtgtcttccccagatgctaaccaatct
acacgtgaagaacttatggaatctggaatggctgatgtgcatgcggtatcagctgatcag
agtgggagattggcaatgtcaatggagaggcttgaccaatcaagcgacagaatcagggag
agtagaagactaatgctggagacagaagaggttggcatctcagttgttgagaatctcagt
cagcaacgccaaaccctccttcacgctcactctaagcttcagggtgtggatgatgccatt
gacaagagcaagaaagtgttgactgctatgtctagaagaatgacgaggaacaaatggatc
gttggttcggtcatcgtggctctcattctcgccatcatcttgatcatctcatacaagctt
tctcattga
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