Brassica rapa (field mustard): 103829217
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Entry
103829217 CDS
T03449
Name
(RefSeq) auxin response factor 1 isoform X1
KO
K14486
auxin response factor
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103829217
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
DUF3915
Motif
Other DBs
NCBI-GeneID:
103829217
NCBI-ProteinID:
XP_009103121
UniProt:
M4F2X7
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Position
A01:17945242..17950281
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AA seq
769 aa
AA seq
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MPLCQSKETTREHVIHVVEQPREREREREREREKTIKIKKSKGSIGEKRGSHSQRVRVGF
NQTLTVFSIFSSGFCLNPRSLALGFVKIVESWKGKRIQNQTDSQMAASNHPCGKPGGALS
DALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCK
VINIQRRAEPETDEVYAQITLLPEADQSEPMSPDAPVQEPEKCTVHSFCKTLTASDTSTH
GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSVF
VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT
GTIFSVFYKPRTSRSEFIVSVNRYLEAKNQKLAVGMRFKMRFEGEEAPEKRFSGTIVGVQ
ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNTPSAHLPPQRNKRPRPP
GLLSPTTAPSTPVTADGVWKSPADNPSSVPLFSPPAKTAAFGLGGNKSFGVSIGSAFWPT
HADGAAESFASALNNESPTEKKQTNGNVCRLFGFELVENMNVDECFSAASVSGAVAVDQP
VPSNEFDSGQQSESLNINQANLPSGSGDHEKSSLRSPQKSQSRQIRSCTKVHMQGSAVGR
AVDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMV
RKIFIYTPEEVKKLSPKNKLTVNVRMQPKTDADENGNTEGRSSSMAGSR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcccctttgccaaagtaaagagactactagagagcatgtcatacatgtggttgaacaa
ccgcgagagagagagagagagagagagagagagagggaaaagacaataaaaataaagaaa
agtaaaggaagcattggagaaaaaagaggcagccatagccagagggttcgtgtcggcttc
aaccaaacactgacggtattctcaatcttttcatctgggttttgtttgaaccctaggtcg
ctggctcttggttttgtcaagatcgttgaatcttggaaaggtaaacgtatccaaaatcaa
acggattctcaaatggcagctagcaatcatccatgtggaaaacctggaggggctttaagt
gatgctttatgtagggagctgtggcatgcttgtgccggacctcttgtaaccctacctcgt
gaaggggaaagagtttattatttccctgaaggtcacatggagcagcttgaggcatcaatg
catcaaggtctggaacagcagatgccttcctttaatctcccatctaagattctctgtaaa
gtgatcaatatccagcgaagggcggagcccgagactgacgaagtatatgcgcaaataacc
ttattgccagaagcggatcaaagtgaacctatgagcccggacgcccctgttcaagaacct
gaaaagtgcacagtgcattcattttgcaagacactaactgcttcggacacaagcacacat
ggtggattttctgtgctacggagacacgcagatgattgtcttccacccttggacatgtcc
caacaaccaccatggcaagaactggttgcaactgacttgcacaataatgaatggcatttt
aggcacattttccgaggccagccaaggcgccatttgctaacaactgggtggagtgttttt
gttagctcgaaaaaactggttgctggtgatgctttcatattcttaaggggtgagaatgaa
gagctccgagttggtgttaggcggcacatgagacaacagactaatatcccctcctctgtc
atttcaagtcatagcatgcatattggggtccttgcgactgccgctcatgccattacaaca
ggaacaatcttttccgtcttctacaagccaagaactagtaggtcagagtttattgtgagc
gtcaataggtatctcgaagccaagaaccagaagctggctgtaggcatgcgtttcaagatg
agattcgagggtgaagaagctcccgagaaaaggttcagtggcacaatagttggtgttcag
gaaaacaaatcttcggtctggcatgattctgaatggagatcgctgaaggttcaatgggac
gagccttcatctgtgtttcgtcctgaaagagtttctccatgggaacttgagcccctagtt
gcaaataatacgccttctgcacatcttcctccacaaaggaacaaacgaccgagacctccg
ggtttgctgtcaccaaccaccgctccatctactcctgttactgcagatggtgtgtggaaa
tccccggcagacaatccttcctcggtaccgttattctctcctcctgccaagaccgcggcc
tttggtcttggtgggaacaaatcatttggagtatccattggatcagccttctggcccact
catgcagatggtgcagctgaatcctttgcttcagcgcttaacaacgagtctcctactgaa
aagaagcaaactaatggaaatgtctgcaggctttttgggtttgagctggttgaaaatatg
aatgtggacgaatgtttctctgctgcttctgtgtccggtgctgtcgctgttgatcaacct
gtcccatccaatgagtttgactctggtcagcaatctgaatcgttaaatatcaaccaagct
aatcttccttcgggtagtggcgatcatgagaaatcctctctgaggtctcctcaaaaatcg
caaagtaggcagatacgtagctgcacaaaggtacacatgcaaggtagtgcagtaggcaga
gctgttgacttgacaaggtcagagtgttacgaggatctgttcaagaagctggaagagatg
ttcgacatcaagggtgaactcttagaatctaccaaaaaatggcaagttgtttacaccgat
gatgaagatgacatgatgatggttggtgacgatccatggaatgagttctgtggaatggtg
agaaagatatttatctacacacccgaagaagtgaagaaactttcacccaagaacaaactc
acagtcaatgttaggatgcaacccaaaactgatgcagacgaaaatgggaacacagagggc
aggtcatcatcgatggctggatcaagatga
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