Brassica rapa (field mustard): 103829259
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Entry
103829259 CDS
T03449
Name
(RefSeq) F-box protein SKIP22 isoform X1
KO
K10293
F-box protein 7
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103829259
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103829259
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
Sde2_N_Ubi_yeast
OTU1_UBXL
YukD
Motif
Other DBs
NCBI-GeneID:
103829259
NCBI-ProteinID:
XP_009103155
UniProt:
M4D7C7
LinkDB
All DBs
Position
A07:12910429..12912092
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AA seq
462 aa
AA seq
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MKLRLRRHETRETLKLELPDSITLHDLRQRINEPSPSSVHLSLNRKDELLAPSPDHTLRS
LGVTSGDLIYYSLVPSAFAASLEEIALASSSEVKSQNEMGIGFAASDVDMHIQDPGEASG
HAPDPMDVEELDVELAAAGSKRLTEPFFLKKVLLEKSGDTSELTTVAMSVHAVMLESGFV
LFNPDCSDNKFSFSKELLTVSLKYTLPELMTSDKGVESVTVRFQSLSDKVVVYGSLGGKL
QRLYLDKRRFVPVIDLVMDTLKSDKDGSSSIYKEMFMFWRMVKDGLVIPLLIGLCDKSGL
ELPPCLMRLPTELKLKILESLPGASVAKMACVCTEIRYLATDNDLWKQKCLEEAKHLVVD
GEGDSVNWKAKFAAFWRQYKRQVSSSRRTLRNFGMGRNRVPPFPRIPDPDHFGWINGGGL
PGPGPFIMLPGQPAGRLGGRRLGRSFSPRCNLGGNSYQQHGE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgattgagacgccacgagaccagagaaaccctgaaactcgaattacccgat
tccatcactctccacgatctccgccaacggatcaacgaaccatccccttcctccgttcat
ctctcccttaaccgcaaagacgagctcctcgctccttctcccgaccataccctccgatcc
ctcggcgtaacatccggtgacctaatctactactccctcgttccctctgctttcgctgct
tccctcgaggagatcgccttagcctcgtcttcagaagttaaatcgcagaatgagatgggg
atcggattcgcagcatccgatgtagatatgcatatccaagatccgggggaagcttcgggt
cacgccccagacccgatggatgttgaggagcttgatgtggagctcgccgccgcgggtagc
aagaggttgaccgaaccgttcttcttgaaaaaggttttacttgagaagtctggtgataca
agcgagttgactactgtagctatgtctgttcacgccgtgatgttggaatctggattcgtt
ctgtttaaccctgactgctctgataacaagtttagcttctcgaaggagttgcttactgtg
tcccttaagtatactctccctgagttaatgaccagcgacaaaggggttgagtctgtgact
gtgaggtttcagagcttaagcgataaggttgtggtctacggttctctaggtgggaagctg
caaaggttgtatcttgataagcgtaggtttgtgcctgtgattgatttggttatggatact
ttgaagtctgataaagacggctcttcgagcatctacaaggagatgttcatgttctggagg
atggtgaaagacggtcttgttatccctttgttgattggtctttgcgataagtctggtttg
gagcttcctccgtgcttgatgcgtttgccgacggagctgaagctgaagatactggagtcg
cttcctggggctagcgttgcgaagatggcttgcgtttgtacggagattcggtacctggcg
acggacaatgacttgtggaaacagaagtgtttggaggaagctaagcatctggttgtggat
ggagagggtgattcggttaactggaaggccaagtttgctgcgttttggaggcagtacaaa
cggcaggtttcgtcatcaaggcgaaccttaaggaactttggcatgggtagaaaccgcgtt
cctccatttcctcggattccagaccctgaccatttcggatggattaatgggggtggcttg
cctggacctggaccattcattatgctccctggacaaccggcgggacgacttgggggacga
agattgggacgtagttttagtcccagatgcaatcttggaggaaacagctaccaacaacat
ggtgagtga
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